Basic Information

Gene Symbol
ARID5B
Assembly
GCA_900480035.1
Location
UELX01001826.1:18656-30167[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-24 5.4e-21 75.3 0.0 2 89 245 330 244 330 0.95
2 2 1.9 7.3e+03 -2.0 0.0 10 33 714 740 711 749 0.87

Sequence Information

Coding Sequence
ATGAAGGTGCACGTACAGGACGAAGTACTGACGATCTCGGAGAAGGTGGTGGTGCGGGTGCACGACCTGGTCACATGGCTCTCGCCCAGCCTCGAGTGGTCATGGGGCCGCGAGGTCGCCTACCTGGGCACGCCCAGCTCCTCGCCCAGCAGCAGTCCCCAGCCCCAGGTGCTCTCGGACCCCGGCCTCGACTTCTCCGACGTCGAGCGCCACCAAAAAGACCTGGAGGCCCTGTCGACGCGCGGACGAGGCCAGGTCGTCGTCAACGAGCCGGCCAACTGCTCTCAGACCAAGGTCGTCGTGCTGTCCTATCCGAGGTACTGCCGATACAGGGCCCTGCTCAGAAGGCTCGAGGGCGCCGAGCCGTCCTGGTCCTGCAGCTCGATCGCCGCGGCCCTGGGAGGCTTCACGGCGGGCCCTGGCACGAGGGTGCTGTTTTGTAGGGATACGTTCGATTATCCGGACCTGGAGACGCACGAGCTGCTCTGCAATCATTTAGCGCCAAAACTAAAAGGCCGACCGCGCCGGAAGCGCAAAAAGCGCAGCGTCTCGCCGTGCGGCGAGTCGAGCAACGAGAGCGAGGCCTCAGTGGCCTCCTCGGCCGCCGCCTCCACCTCCAAGGGCTCCAGCTCGTCCTCCTCTGCGATCGCCGCGAgtagcaacagcagcagcagcaggcgcatCAACAACCTGGCGGCGCTCGGCGGCGTTGATCGCAAGCCCAGCCCCGAGGAGAAGAAATTCGTCAGCGACGTGCACAGCTTCATGTCCTCGCGGAATACTCCGCTTGGCAAGATGCCCCTGCTCGGTTACAGGCAGATTGACCTGTTCCTATTTTACACAAAAGTCCAGGATTTGGGTGGTTACGACAGAGTTAGTGCAAACCGTCTTTGGAAGTCAATATACGATGACATGGGTGGCAACACAGGATCGACAAGTGCTGCAACTATAACAAGAAGGCATTATGAAAAgcTACTTCTACCCTACGAGAGATGTCAGAAGATTGATGAGGCCAAGATCAAAGCAAATCTGGCAAACAGACGCATCAAAACGCCAAGTATATCTGACGCCTCGGAGGATTCCGTTGAAGTTAAAAGGGAGACTGAAAGCCCACCGCCTTCGGAAACGCCACCTCCTAGTGAGGCATCCAACTCCACAGTCACTCCACCTCCTCTACAGTCAATTCTTTCGACTTCGCCATTCCTGCCGGGAGACAAGCTACCGCGCGCCGAGTCCGGCAAGACCTCGTCGCTGCGCAGCGTGCGTGTCAAGCCCGAGCGGCTCAAGTCGCTGAACACGATTATCGCGACGAGCAATCCAGCGAACGGCCCTGCCAGCAGCAACCCCCAACTGCCCAGCTCGCCCACGACGATGGCGGGCACGACGTCGTCGTCGGGCGCCTCCTCGCCCACTGGCACGCCGCCCGCTTCCACGACGCCGACGGCCGGCCAGCAGCACAGCGTGCTCGAGCGCCAGCTCAACAGTCCGTTGATAACTCAACAGGTACCACCATCGTGTTCACCTCCGGGCCTGCCAGTGAGCACAGTGGCCACGAATGCGACGACGGTGGTGACGCTAACCCCGCCCCCGGAGAAGGACATGAAGGAGATCAAGCTCGATTCGAAACAAACGGCACTGCTAGCTCAGGGCAAGGAGAACATACCGCTGTTTGAGGAGAAGACCGGCGTCATATTCGCGGACAAGCCGCGCTCGCCCGAAGTCATAGATCTCGAGACGGAGACAGAGTCCGGCACCCGGGATAAGCTTATCATTCCCAGCTTCAAGAAGCGCAAGCTCGAAATACTGCGCGAAGGCGGCCTGGAGGTCACGCCCGTTGAATTAGatGCCAGACCGAGTGTTATTCAGCCTACAACGACAGCCTGCCTCTCTTCCTCAACGACAACGACCACATCGTCCTCGGCGCCGTCTCCAACACCGCTAGTAACTCCGACACTCTCCGGTCAAGTTACGCCACAGTCACCCATTAAACAAGATGAAAAGTCCGCTTTTACGCTGCCTCCATCCGCGGTGATTCCTAAGTTGATAAACGTTACAGTCACCCCGGATATCGGCCATATGCTGCCACGCTCAGGAGAAGATCGACAACATCCCCTTACACCCGttaaacagcagcagcagcagcagcacatgGCGGCAAATGGCTCGCCGACGGCGCCTGGGCAGCCATCGCCCGCTGTAAACAGTCGGGTTATTAATCTGGGCAACTCCAACAACGCATCGCTGTTGCAGCTCTACGCTGCCGCGCAAGTCAATCCCCGGTTCGTACCGCCGCTCTTGACGAATGGCAGACCTATGCCGCACAAGGTCACGCAGTCCAAATCGATGTTTGCGAAGGATGAAAAAATGGTTTACGGAAATCCAAAGGATATTTTGGTGACTCCGAAATATCTGCCTCCTGTGATGCCGCAGCCACATGCGCCTAGAAATCCAAGtGTTTTATCAGCACCCAGCGTAAGATGCGGTAGCGGAAGCGATCCTACTCCGGGTGGTGTCCTTGATCTCACCCAAAAAGCCTGCTCAACTCCTGAGCGACCAACCTACGGTCGACCAAATTTGGAAATCGTCAGGGTGCCGGTAGTGCCACGACCAACGCCGTTAAATCTCGACACGCGTCTTCAGAACATGGAAGCTCATTATCGCGCTATGAACATGCCGACCAACCTCTGCAAAGATATGAACAGCAAACCACCGCCACCGCCTGATTCAGTACCAAATGCCCGTAAGACTCAGTTTGTTACTGGGACCGTTTCCACTAATCCAGCCGTTGGATACACGAACGTCCTCGATAGTCGAACGATGGCTACAAACAATTTAGAAATCACGCTGGTTAGTCCGAAAAAATCATCCGGTGGTACCGTTGCCATGCCCCAGGATAGTCCGCCTCGCAATAATAGCTCGGCGCACTCACCAATGCCAGTACAAAGGAGGCCGCCGCCACTTCCACCTCAACCTCAGCCACAGCATCATCTGAACGGCAAGTTTCCCACGAGATTGCCAGTAGAACCTGTATCTCCGTATACACCTCGAAAACCGACTTCAAATAATACTGGCAGTGGAAGTAGTCACCATCCGGTGATACCGAATGTGCCGAACTTGAGCCACCTGAATCATAATGCAGCTGGTAATCAAGAGCCGAGTTTGATCAGTACTGTACTTCAATTACAGTATATGGAATTAGAGAAGAGAAAACAGGCTGCCGAGGAGCAAAGGAATAAAGAACAGCATCGCAGGATAAGCGAAAGCGACAAGCTTACGttgcagcagcaacaacagcagagACTAGAAGACCTTAATGCAGCTGGTAATCAAGATCCGAGTTTAATCAGTACTGTGCTTCAGTTACAATATATGGAATTAGAGAAGAGAAAACAGGCTGCCGAGGAGCAAAGGAGTAAAGAACAGCATCGCAGGATAAGCGAAGGAGACAAGCTTACGttgcagcagcaacaacagcagagACTAGAAGGCGCCGCGAAACAGCAGCAGTCAAGGGAATCTGAGCAACGAAGGCACAGTGTGCCTAGCCTGCCAACGGGTTTCATTCCGACGATACCGCCGGCAAATCCGGCCTTCCTTGCGCATCAGCTCGCTGTCGCCAACAACGGCTCATCACCGACTGCCGCAGCGGCTGGCGGCAAGTATCTGCCGATGCTTGATCCGATGTACTACTCGGCCTTTTACAATGGCCTGTTCCCTGGACACATGGCCCAGGGTGCACACTTCCTGACACCTGAACTCAGCGCTTATTATAAGGAGTTGCTCGCCTCTTCTCCTGCAGCACAACAGACGAGGCTGGCTGCTATGGCTGCTGGCCAGCAGCACCAGCCCGCTGCTCCAACGTCCAAGTAA
Protein Sequence
MKVHVQDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVAYLGTPSSSPSSSPQPQVLSDPGLDFSDVERHQKDLEALSTRGRGQVVVNEPANCSQTKVVVLSYPRYCRYRALLRRLEGAEPSWSCSSIAAALGGFTAGPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPCGESSNESEASVASSAAASTSKGSSSSSSAIAASSNSSSSRRINNLAALGGVDRKPSPEEKKFVSDVHSFMSSRNTPLGKMPLLGYRQIDLFLFYTKVQDLGGYDRVSANRLWKSIYDDMGGNTGSTSAATITRRHYEKLLLPYERCQKIDEAKIKANLANRRIKTPSISDASEDSVEVKRETESPPPSETPPPSEASNSTVTPPPLQSILSTSPFLPGDKLPRAESGKTSSLRSVRVKPERLKSLNTIIATSNPANGPASSNPQLPSSPTTMAGTTSSSGASSPTGTPPASTTPTAGQQHSVLERQLNSPLITQQVPPSCSPPGLPVSTVATNATTVVTLTPPPEKDMKEIKLDSKQTALLAQGKENIPLFEEKTGVIFADKPRSPEVIDLETETESGTRDKLIIPSFKKRKLEILREGGLEVTPVELDARPSVIQPTTTACLSSSTTTTTSSSAPSPTPLVTPTLSGQVTPQSPIKQDEKSAFTLPPSAVIPKLINVTVTPDIGHMLPRSGEDRQHPLTPVKQQQQQQHMAANGSPTAPGQPSPAVNSRVINLGNSNNASLLQLYAAAQVNPRFVPPLLTNGRPMPHKVTQSKSMFAKDEKMVYGNPKDILVTPKYLPPVMPQPHAPRNPSVLSAPSVRCGSGSDPTPGGVLDLTQKACSTPERPTYGRPNLEIVRVPVVPRPTPLNLDTRLQNMEAHYRAMNMPTNLCKDMNSKPPPPPDSVPNARKTQFVTGTVSTNPAVGYTNVLDSRTMATNNLEITLVSPKKSSGGTVAMPQDSPPRNNSSAHSPMPVQRRPPPLPPQPQPQHHLNGKFPTRLPVEPVSPYTPRKPTSNNTGSGSSHHPVIPNVPNLSHLNHNAAGNQEPSLISTVLQLQYMELEKRKQAAEEQRNKEQHRRISESDKLTLQQQQQQRLEDLNAAGNQDPSLISTVLQLQYMELEKRKQAAEEQRSKEQHRRISEGDKLTLQQQQQQRLEGAAKQQQSRESEQRRHSVPSLPTGFIPTIPPANPAFLAHQLAVANNGSSPTAAAAGGKYLPMLDPMYYSAFYNGLFPGHMAQGAHFLTPELSAYYKELLASSPAAQQTRLAAMAAGQQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690879;
90% Identity
iTF_00691719;
80% Identity
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