Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030522685.1
Location
JAPYZA010005785.1:1-5996[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-24 2.7e-20 74.3 0.0 1 89 77 163 77 163 0.95

Sequence Information

Coding Sequence
CCGAAATTGAAGGGTCGACCGCGCCGGAAGCGCAAAAAGCGCAGCGTCTCGCCGTGCGGCGAGTCCAGCAACGAGAGCGAGGCGTCGGTCGCCTCCTCAGCCGCCGCCTCCACCTCCAAGGGATCCAGCTCGTCCTCGTCTGCCATCGCCGCGAgtagcggcagcagcagcagcaggcgcaTCAACAATCTGGCATCGCTGGGCGCTGTTGATCGCAAACCCAGCCCCGAGGAGAAGAAATTCGTGAGCGACGTGCACAGCTTCATGTCCTCGCGGAATACTCCGCTCGGCAAGATGCCCCTGCTCGGTTACAGGCagattgaTCTGTTCCTGTTTTATACAAAAGTCCGAGATTTGGGTGGCTACGACAGAGTTAGTGCAAACCGTCTTTGGAAGTCAATATACGATGACATGGGTGGCAACACAGGATCGACAAGTGCTGCAACTATAACAAGAAGGCATTATGAAAAGCTACTTCTGCCCTACGAGAGATGTCAGAAGATCGATGAGACCAAGATCAAAGCAAATCTGGCAAACAGACGCATCAAAACGCCAAGTATATCGGACGCCTCAGAGGATTCCGTTGAAGTTAAAAGGGAGACTGAAAGCCCACCGCCTTCGGAAACGCCACCTCCTAGTGAGGCATCCAACTCCACAGTCACTCCACCTCCTCTACAGTCAATTCTTTCGACTTCGCCATTCCTGCCGGGAGACAAGCTACCGCGCGCCGAGTCCGGCAAGACCTCGTCGCTGCGCAGCGTGCGTGTCAAGCCCGAGCGGCTCAAGTCGCTGAACACGATTATCGCGACGAGCAATCCAGCGAACGGCCCTGCCAGCAGCCACCCCCAACTGCCCAGCTCGCCCACGACGATGGCGGGCACGACGACGTCGTCGTCGGGCGCCTCCTCGCCCACTGGCACGCCGCCCGCCTCCACGACGCCGACGGCCGGCCAGCAGCACAGCGTGCTCGAGCGCCAGCTCAACAGTCCGTTGATAACTCAACAGGTACCACCATCGTGTTCACCTCCGGGCCTGCCAGTGGCCACGAATGCGACGACGGTGGTGACGCTAACTCCGCCCCCGGAGAAGGACATGAAGGAGATCAAGCTCGATGCGAAACAGACGTCACTGCTGGCTCAGGGCAAGGAGAACATACCGCTGTTCGAGGAGAAGGCCGGCGTCATATTCGCGGACAAGCCGCGCTCGCCCGAAGTCATAGATCTCGAGACGGAGACCGAGTCCGGCACCCGGGATAAGCTCATCATTCCCAGCTTCAAGAAGCGCAAGCTCGAAATACTGCGCGAAGGCGGCCTGGAGGTCACGCCCGTTGAATTAGatGCCAGACCGAGCGTTATTCAGCCTACAACGACAGCCTGCCTCTCTTCCTCAACGACAACGACCACATCATCCTCGGCGCCGTCTCCGACACCGCTAGTAACTCCGACACTCTCCGGTCAAGTTACGCCACAGTCACCCATCAAACAAGATGAAAAATCCGCTTTTACGCTGCCTCCATCCGCGGTGATTCCCAAGTTGATAAACGTTACAGTCACCCCGGATATCGGCCACATGCTGCCACGCTCAGGAGAAGATCGTCAACACCCCCTTACACCCGttaaacagcagcagcaacagcaaatGCCGGCAAATGGCTCGCCGACGGCGCCTGGGCAGCCATCGCCTGCTGGAAACAGTCGGGTTATTAATCTGTGCAACTCCAACAACGCATCGTTATTGCAGCTCTACGCTGCCGCGCAAGTCAATCCCCGGTTCGTACCGCCGCTTTTGACGAATGGTAGACAGATGCCGCACAAGGTCACGCAGTCCAAATCGATGTTTGCGAAGGATGAAAAAACGGTTTACGGAAATCCAAAGGATATTTTGGTGACTCCAAAATATCTGCCTCCTGTGCTACCACAGCCACATGCGCCTAGGAATCCAAGtattttatcAGCACCCAGCGTCAGATGCGGTAGCGGCAGCGATCCTACTCCGGGTGGTGTCCTTGATCTCACCCAAAAAGCCTGCTCAACTCCTGAGCGACCGACCTACGGTCGACCAAATTTGGAAATTGTCAGGGTGCCGGTAGTGCCACGACCAACGCCGTTAAATCTCGAAACGCGTCCACAGAACATGGAAGCTCATTACCGCGCTATGAACATGCCGACCAACCTCTGCAAAGATATGAACAACAAACCTCACCCATCGTCTGATTCAGTATCAAATGCCCGCAAGACTCAGTTTGTTACTGGGACCGTTGCCACTAATCCAGCCGTTGGATACACGAACGTCCTCGATAGTCGAACGATGGCTACAAACAATTTAGAAATCACGCTGGTTAGTCCGAAAAAATCGTCCGGCGGTACCGTTGCCATGCCCCAGGATAGTCCGCCACGCAATAATAGCTCGGCGCACTCACCTATGCCAGTACAAAGGAGGCAGCCGCCACCACCACAGCAACAGCCACCACCGCCACTTCCACCTCAACAACAGCATCATCTGAATGGCAAGTTTCCCACGAGAATGCCAGCAGAACCTGTATCTCCGTATACACCTCGAAAACCGACTTCAAATAATACCGGCAGTGGAAGTAGTCACCATCCAGTGATACCAAATGTGCCGAACTTGAGCCACCTGAACGTTAATGCAGCTGGTTATCCAAAACCGAGTTTAGTCAGCAATTATCAGCATATGGCATTAGAGAAGAGAAAACAGGCTGCCGAGGAGCAAAGGAGTAAAGAACAGCATCGCAGGATAAGCGAAGGCGACAAGCTTACGTTgcaacagcaacaacagcagagACTAGAAGGCGCCTCGAAACAGCAGCAGTCAAGGGAATCTGAGCAACGAAGGCACAGTGTGCCGAACCTGCCAACGGGTTTCATTCCGACGATACCGTCGGCAAATCCGGCCTTCCTTGCACACCAGCTCGCCGTCGCCAACAACGGCTCATCACCTGCTGCCGCAGCTGCTGCAGCAGCGGCTAGCGGCAAGTATCTGCCGATGCTTGATCCGATGTACTACTCGGCCTTCTACAATGGCCTGTTCCCTGGGCATATGGCTCCAGGAGCACCCTTCCTCACACCTGAACTCAGCGCTTACTATAAAGAGTTGCTGGCCTCTTCTCCTGCAGCACAACAGACGAGGCTAGCTGCTATGGCTGCTGGCCAGCAGCACCAGCCCGCTGCTCCAACGTCCAAGTAA
Protein Sequence
PKLKGRPRRKRKKRSVSPCGESSNESEASVASSAAASTSKGSSSSSSAIAASSGSSSSRRINNLASLGAVDRKPSPEEKKFVSDVHSFMSSRNTPLGKMPLLGYRQIDLFLFYTKVRDLGGYDRVSANRLWKSIYDDMGGNTGSTSAATITRRHYEKLLLPYERCQKIDETKIKANLANRRIKTPSISDASEDSVEVKRETESPPPSETPPPSEASNSTVTPPPLQSILSTSPFLPGDKLPRAESGKTSSLRSVRVKPERLKSLNTIIATSNPANGPASSHPQLPSSPTTMAGTTTSSSGASSPTGTPPASTTPTAGQQHSVLERQLNSPLITQQVPPSCSPPGLPVATNATTVVTLTPPPEKDMKEIKLDAKQTSLLAQGKENIPLFEEKAGVIFADKPRSPEVIDLETETESGTRDKLIIPSFKKRKLEILREGGLEVTPVELDARPSVIQPTTTACLSSSTTTTTSSSAPSPTPLVTPTLSGQVTPQSPIKQDEKSAFTLPPSAVIPKLINVTVTPDIGHMLPRSGEDRQHPLTPVKQQQQQQMPANGSPTAPGQPSPAGNSRVINLCNSNNASLLQLYAAAQVNPRFVPPLLTNGRQMPHKVTQSKSMFAKDEKTVYGNPKDILVTPKYLPPVLPQPHAPRNPSILSAPSVRCGSGSDPTPGGVLDLTQKACSTPERPTYGRPNLEIVRVPVVPRPTPLNLETRPQNMEAHYRAMNMPTNLCKDMNNKPHPSSDSVSNARKTQFVTGTVATNPAVGYTNVLDSRTMATNNLEITLVSPKKSSGGTVAMPQDSPPRNNSSAHSPMPVQRRQPPPPQQQPPPPLPPQQQHHLNGKFPTRMPAEPVSPYTPRKPTSNNTGSGSSHHPVIPNVPNLSHLNVNAAGYPKPSLVSNYQHMALEKRKQAAEEQRSKEQHRRISEGDKLTLQQQQQQRLEGASKQQQSRESEQRRHSVPNLPTGFIPTIPSANPAFLAHQLAVANNGSSPAAAAAAAAASGKYLPMLDPMYYSAFYNGLFPGHMAPGAPFLTPELSAYYKELLASSPAAQQTRLAAMAAGQQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00689948;
80% Identity
iTF_00689948;