Ekie001941.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- ZFX
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010000870.1:18506-23886[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.5 6.2e+02 3.2 0.1 3 23 26 46 25 46 0.94 2 15 1.5 3.9e+02 3.9 2.6 1 20 1008 1027 1008 1031 0.76 3 15 3.7e-05 0.0093 18.4 1.5 2 23 1119 1141 1118 1141 0.97 4 15 0.0037 0.93 12.1 0.3 2 23 1154 1175 1154 1175 0.98 5 15 2.7e-05 0.0067 18.8 2.3 2 23 1178 1199 1177 1199 0.97 6 15 0.066 17 8.2 0.3 1 23 1205 1227 1205 1227 0.95 7 15 3.7e-05 0.0093 18.4 4.5 2 23 1234 1255 1233 1256 0.95 8 15 0.16 41 6.9 3.7 5 23 1269 1287 1268 1287 0.97 9 15 3.3e-05 0.0084 18.5 1.5 3 23 1294 1315 1293 1315 0.97 10 15 0.015 3.8 10.2 0.3 2 23 1331 1351 1330 1351 0.97 11 15 0.0001 0.025 17.0 0.7 1 20 1357 1376 1357 1379 0.92 12 15 0.00013 0.032 16.7 2.7 1 23 1387 1409 1387 1409 0.99 13 15 0.0035 0.88 12.2 3.2 1 23 1415 1437 1415 1437 0.97 14 15 1.6e-05 0.0041 19.5 3.8 1 23 1443 1465 1443 1465 0.99 15 15 0.00046 0.11 15.0 7.2 1 23 1471 1493 1471 1494 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGCACAGCTGTGAGTGCGATGTCGGCGGGAGTACCGCAGAATGGAGGCGGCGCCGGGGCAGTGGCCTGCCCGGTCTGCACGCTCTACCTACGCGAGGGCATCAGCCTGCAGAAGCACTTGGACACTCATCCCAAGGAGCAGGTGATCGAGGCGCTCATCCGGGCCAGCAGCGCCGGCGCTGGCGCCTCGGCTCTGCTCAGCCAGAACCGCGCGCCGCAGCCACCGTCGCAACCGCAGACGCCGGTGCTGGCGCCAACGCCAACCCCTGCGCTGCCGCCTGGTCCAGCCACGCCGCAGCAGCAACAGCCTCCGGCCGCATCGCCGGGTCCACATGTTCCTCACGCCCAGTCGCCCTACCCGATTGGGCCTATATTTGAGTGTCCGCCTATCAACGCTATGATACCGCCACCTCAATTCGCGTCTTTTAGCTACCAGCAGTTTGTTAATAACGGCACGATGATGATACCCGCACAGTACGCGATGGCCCAGGCGCAGGCCGCTCCAACCAGCCAAATGATGCAGATGCTGTACAGCCCTTATGGCATGTATCACCAGCAACAGATTCCTACGGTCCAGATGATTTCAGCGCCACCGATGATGCCAACCTCAACAGCGACGCTGCCGACGACGGTGCCTGCAGTCACGCCGCGCATGAGGCCGGCTACGAGCACGAGCAACGTCGCGCCAGTCAACGAGACGACGGCGTCGCCGCCGAGGCCTGTCTCGTGCGCACAGCAACTGCCTTCACCGCTAGCAGCATTGTCTGCGGTACAGCAACCGCAACAGCCGGAACCAGAAGAAGAACCACAATCGCAACAGCAAAATCTTGTTTTGGAGCCGACACAAATTGTGCGGGAAATCGAAAGTGGACCCGATAGTATACTGCCGGATTTGGAGATGCCTCCGTCGCCTGAGCCACCAAGTACCGAGGTCGAGAGTGAACAGAATGTCATTCATGCAGAGCAGCAAATTCAGAATAGCTGTTCGCAGGTAGGACAGCGACACGCACAGCAATATCAGAGGGAGGATTCACGAACATTAATCAATAATACTAGCGATGATAATGCTGACGATGATAAGACTGAAAGAATCCTACCTGATATTGAAGATAATGATGAAATTGAATCACTTTTAGTGCGGCAGACGGAAGTAGTAGAAATTCACAAAGAAACCGAAATTCAAGTAGAACAGTCTATTGAACACATGGAGACATCGGTTGAAGAATCGACTAGGGAGAATGATGTAGAAAATATCCctaataataaagaagaaattagcaaaaatttaGAAGATAAAACTGATGATGTTGAAGTCATCGAGGAAAGAATAGAACCTCATGATCTAACAATGTCAGTTGATAAGACTCGAATTCCTAACATTAAAAAACCCGAAATAGAACAATTAAGCagattaattgtaaatatggaATCAGAATTTAACAACGTAGAGTTATCCAGCAAAGATGATGAGGAAGTCCTTGAACGATCTCAGGAAGTTATCGAGAACGCTTTGTCACCGGAGCCTGCTGTTGAAAAGCACCCAGAGGAGGATGAAGCGACTAATGCATCATATAACAAAACAACTTCCGAACCTACTGagtgtaaaattattgtttccCATGAAGATACAGATGTTTCATCCGTATCATCGTCAGATTCATTACGATGTGAtatggaaattcaaaaaattactacaCCCTCTTATCAGTACAAGTATTCTCAATCGTGCCCTACTTCTCCCGTCAGTAAAAAGAAGTTTTGGCGTTCTCTTTCGCGCGTCTCTCTACGTTACGACTTAGGCCGTTCAAATGAGAATATATGCTCATATCCAGTCGGTTTCGAAGCAACAACACTTGAAGACTActtaaaagataattataatgatGAGGACATGGAGCTGGAACAAAGCAGCGGTATGATAGTAGAACGAGCACGCTCTCACACACCCTTGTCTACCAGTATGACTGGTGCATCTGTGTTGAAAGCTCGTCGCAGTAAAATACCAAATTCGCCTTTGTCCATGCGCTCTTCCTCATCATACTGTCATATGGaggatgaagaagaagaagaagaagaagactcAGAGGCTGAAAGCTGTGGCAGTTGTCATTCCAATGAAAAGGACGACGAGGAAGATGATGAAGAAGATCAAATATTGATGGATAGCTCAGCTCATCAGATGATTGAAGACCATGAGCGCGATGAGAAAAAACAGGTATTGCACGTTGAAGAAAGCAAGGCCACAGTTACCACTGAGATAGTGCAACAGCAACGCCTACATCATCCACAGGATCAACCTGCAGATTTTCGAACACAATGTCTAATGGCCGATCATTACTCTGCTAATCAATTTCCACTGGATCACCATCCAACGTCGCAGCAACAGTCGTCTGTTTCGGTGCACCATGAGACTTATCCACTgtcaaatagtgaaatttcacaaaatttactgaATATGTCTGAATGTGCAGATCCAACTACAAGTGCGGATTCAAAAAGCTTTTCTAGCTCGAGCAAGTCGTCGATTCAGAAACCATCTACGGAACTGCTTAACATCAGTGAAGATGCACATGCAGGACCAatgaatgtttttgaatttgacGGGTTACAAATACTTGTGCCAAGTACATTTATCAGTGAATCATCACAAAAGGCCGTAAGTGGGACGAGTCAACAATCGATGTCTAGTAGTGAAAATGGAGCAGGCAATGATGAGGAAGTTAAAAGCGTAAATATGAGGGCTGATGAAACAATGCCACCTAGAGGCGAACTGTCTGAGCAGGAGAGCAATGGATGTACCGAACCGTCGGCTTGgcagTTATACATGGGTCAAGAATCTTCGCGGATGTCGACATCTTATGATCTGATGGCACGTGAAAGCTGGGAAGAATCCGAAGGCTCCGATCATGAAGAGAACAATGCTGGCCCTCTGCTCGACAGCCGTTCTTTAGCAACTCACTTCACCTCAAGTTTGTTCTTGGACCGCGATCGTAAAACGCCTACCCGACGCGTTTTCAAGTGTTCGCACTGTCCGGAGGTATTCGAGTGTCCAAAAGAGCGTCGTGTACACAGTACGATGGTACACAAAGAGGCAGGACCTTCCGGATGCAGCAATGACAATATGGATAATCAATCCGAGCTGAGAGATCTTAAGCTACTTGACGGACGTGCTAACGTCTTCGATGATCTTTTTGTGCCTAGTGGGTTGCATGTACAACAGACGTATCTTCAACATCATCAGCAACCGCTTTTGCATCAGCTCCAGCCACCTCAGCATTCGAGCTCTGCGAAATCCGAAACAGATGCTAAAATCGATTCCTTACATTTGTCCACGGTGAATGAGGTAACATGCAATATGTGTAATCAACGTTTCAGCAGCGAGAAATCTCTGCAAATTCATCAGAGACGGATGCACATGTCGGAGCCGTCAAAGCGAATACGGGAAAACGCGAAATGCCAAATCTGCAGCGAAGAATTTACTTCTGTTGCCTCGTTCAATCTTCATCTGAAAATTCATCCGCTCGAGTGCGGACAGTGTGGTAAATACTTTTATCGCAAACAAAATTTCAAGCTGCATATGAAGCGACATTTAGGGATAAAACCTTTCCCATGCACAGTCTGTGAAAAGGCTTTCCTTACTAAACAGAAGCTTGATGAACATACCAACGGTCACACTGGCAACGCCCCTGTCAAGTGTAACTTGTGTAACGAGACGTTCAGACGCTACTCGAACCTTACGCAACACAAGAATCGTCATCATctcaatattaaaaagaaactgAAAGACTATATCTGCCATTGTGGCGAAGTTTTTCACACAAAAAAGAAGCTTGCCTGGCACAAAGAAACGCACGATGAGAAACCCAAGGCGTGTACCTACTGTAATGAGCGCTTTATACACATGGCTAGTTTAACTAGACACATGCGACGGGCCCATAACCGTAGGTTCGTGCCTGATGCTCAGAGAGAGAATGAGAACGTCGAGTGTCCTATTTGCAAATGCATTTATCTTAGGTCATCCCTTGCTGTGCATATGCGCGTTCACAATGGAGAAAGACCTTATGAGTGCCAGGTATGTTCTAAGGCCTTCAGTACCAAATGGAATTTACAGCTGCACAAGTGGACTCATGCCGCTCGTAGCACGAAGCCTTTCAAGTGCAACCAGTGTAGTGCTGCTTTCTATCGGCACAGCGACTACACCGCTCACATGAACTCTCACAGGAATGTCAGGCCGTATACCTGTAATTATTGCGGGGCTCAGTTCATCAGAAAATACAATTGCTTGCGGCACGTTAAAGAACACGAAGAAAACAAGGCATACACCTGTGACGTATGTAGTAAGACTTTCCACAGATCTTACTATTTAAAGGAACACTTGAGGGTACATTCTGGAGCGAGACCTTATACTTGTCACATATGCGGTAAATCTAGCAGCACAAAGTCCAATCATAATAAACACGTCAGGATTCATCATGCGCGTGAGCCTGTAAATACGGAAAATTAA
- Protein Sequence
- MDLSTAVSAMSAGVPQNGGGAGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGAGASALLSQNRAPQPPSQPQTPVLAPTPTPALPPGPATPQQQQPPAASPGPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAAPTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMMPTSTATLPTTVPAVTPRMRPATSTSNVAPVNETTASPPRPVSCAQQLPSPLAALSAVQQPQQPEPEEEPQSQQQNLVLEPTQIVREIESGPDSILPDLEMPPSPEPPSTEVESEQNVIHAEQQIQNSCSQVGQRHAQQYQREDSRTLINNTSDDNADDDKTERILPDIEDNDEIESLLVRQTEVVEIHKETEIQVEQSIEHMETSVEESTRENDVENIPNNKEEISKNLEDKTDDVEVIEERIEPHDLTMSVDKTRIPNIKKPEIEQLSRLIVNMESEFNNVELSSKDDEEVLERSQEVIENALSPEPAVEKHPEEDEATNASYNKTTSEPTECKIIVSHEDTDVSSVSSSDSLRCDMEIQKITTPSYQYKYSQSCPTSPVSKKKFWRSLSRVSLRYDLGRSNENICSYPVGFEATTLEDYLKDNYNDEDMELEQSSGMIVERARSHTPLSTSMTGASVLKARRSKIPNSPLSMRSSSSYCHMEDEEEEEEEDSEAESCGSCHSNEKDDEEDDEEDQILMDSSAHQMIEDHERDEKKQVLHVEESKATVTTEIVQQQRLHHPQDQPADFRTQCLMADHYSANQFPLDHHPTSQQQSSVSVHHETYPLSNSEISQNLLNMSECADPTTSADSKSFSSSSKSSIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEENNAGPLLDSRSLATHFTSSLFLDRDRKTPTRRVFKCSHCPEVFECPKERRVHSTMVHKEAGPSGCSNDNMDNQSELRDLKLLDGRANVFDDLFVPSGLHVQQTYLQHHQQPLLHQLQPPQHSSSAKSETDAKIDSLHLSTVNEVTCNMCNQRFSSEKSLQIHQRRMHMSEPSKRIRENAKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCEKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCSKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691384; iTF_00690528; iTF_00693240;
- 90% Identity
- iTF_00693240; iTF_00690528; iTF_00691384;
- 80% Identity
- -