Basic Information

Gene Symbol
ZFX
Assembly
GCA_900480025.1
Location
UDEW01001851.1:2119-7513[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.2 1.9e+02 3.2 0.1 3 23 26 46 25 46 0.94
2 15 1.3 1.2e+02 3.9 2.6 1 20 1006 1025 1006 1029 0.76
3 15 3.2e-05 0.0028 18.4 1.5 2 23 1117 1139 1116 1139 0.97
4 15 0.0032 0.29 12.1 0.3 2 23 1152 1173 1152 1173 0.98
5 15 2.3e-05 0.0021 18.8 2.3 2 23 1176 1197 1175 1197 0.97
6 15 0.057 5.1 8.2 0.3 1 23 1203 1225 1203 1225 0.95
7 15 3.2e-05 0.0029 18.4 4.5 2 23 1232 1253 1231 1254 0.95
8 15 0.14 13 6.9 3.7 5 23 1267 1285 1266 1285 0.97
9 15 2.9e-05 0.0026 18.5 1.5 3 23 1292 1313 1291 1313 0.97
10 15 0.013 1.2 10.2 0.3 2 23 1329 1349 1328 1349 0.97
11 15 8.8e-05 0.0078 17.0 0.7 1 20 1355 1374 1355 1377 0.92
12 15 0.00011 0.0096 16.7 2.7 1 23 1385 1407 1385 1407 0.99
13 15 0.0031 0.27 12.2 3.2 1 23 1413 1435 1413 1435 0.97
14 15 1.4e-05 0.0013 19.5 3.8 1 23 1441 1463 1441 1463 0.99
15 15 0.0004 0.035 15.0 7.2 1 23 1469 1491 1469 1492 0.96

Sequence Information

Coding Sequence
atGGATCTCAGCACAGCTGTGAGTGCGATGTCGGCTGGACTACCGCAGAATGGAGGCGGCGTCGGGGCAGTGGCCTGCCCGGTCTGCACGTTGTACCTACGCGAGGGCATCAGCCTGCAGAAGCACTTGGACACTCATCCCAAGGAGCAGGTGATCGAGGCGCTCATTCGGGCCAGCAGCGCCGGCGCTGGCGCCTCGGCTCTGCTCAGCCAGAACCGCGCGCCGCAGCCACCGTCGCAGCCGCAGACGCCGGTGCTGGCGCCAACGCCGACGGCTGCGCTGCCGCCTGGTCCAGCCacgccgcagcagcagcaacagcctCCGGCAGCCTCGCCGGGTCCACATGTTCCTCACGCCCAGTCGCCCTACCCGATTGGGCCTATATTTGAGTGTCCGCCTATCAACGCAATGATACCGCCGCCTCAATTCGCGTCTTTCAGCTACCAGCAGTTTGTTAATAATGGCACGATGATGATACCCGCACAGTACGCGATGGCCCAGGCGCAGGCAGCTCCAACCAGTCAAATGATGCAGATGCTGTACAGCCCTTATGGCATGTATCACCAGCAACAGATTCCTACAGTCCAGATGATTTCAGCGCCACCGATGATGCCAACTTCAACAGCCACGCTGCCGACGACGGTGCCTGCAGTCACGCCGCGCATGAGGCCCGCTACGAGCACGAGCAACGTCGCGTCCGTCAACGAGACGACGGCGTCACCGCCGAGGCCTGTCTCGTGCGCACAGCAGCTGCCTTCGCCACTAGCAGCGCTGTCGGCGGCACAGCAACCGCAACAGCCGGAACCAGAAGAGGAACCACAATCGCAACAGCAAAATCTCATTTTGGAGCCGACACAAATTGTGCGGGAAATCGAAAATGGACCCGACAGTATACTGCCGGATTTGGAGATGCCTCCGTCGCCTGAGCCACCGAGTACCGAGGTCGAGAATGAACAGAATGTCATTCATGCAGAGCAGCAGATTCAGAATAGCTGTTCGCACGTAGAACAGCGACACGCACAGCAATATCAGAGGGAGGATTCACGTACATTAATCAATAATACTAGTGATGATAATGCTGACGATGATAAGACTGAAAGAATCCTACCTGATATTGAAGATAATGATGAAATTGAATCCCTTTTAGTCCGGCAGACGGAAGTAGTAGAAATTGACAAAGAAACCGAAATTCAAGTAGAACAGTCTATTGAACACATGGAGACATCAGTTGAAGAATCGACTAGAGAGAATGATGTAGAAAATATCCCTAATAATACAGAagaaattagcaaaaatttagaagataAAACTGATAATGTTGAAGTCATCGAGGAAAGAACAGAACCTCATGATCTAACAATGTCAGTTGATAAGACTCGAATTCCTAACATCAAAAAACCCGAAATAGAACAATTAAGCagattaattgtaaatatggAATCAGAATTTAATAACGTAGAGTTATCCAACAAAGATGATGAGGGAGTCCTTGAACGATCTCAGGAAGTTATCGAAAACGCTTTGTCAGCCGAGCATGCTGTTGAAAAGCATCCAGAGGAGGATGAAGCGACCAATGCATCGTATAACAAAACAACTTCCGAACCTACTgagtgtaaaattattgtttcccATGAAGATACAGATGTTTCATCCGTATCATCGTCAGATTCATTACGATGTGATATGgaaattgacaaaattatcACACCTTCTTATCAGTACAAGTATTCTCAATCGTGCCCTACTTCTCCCATCAGTAAAAAGAAGTTTTGGCGTTCTCTTTCGCGCGCCTCTCTACGTTACGACTTTGGCcgttcaaatgaaaatatgtgcTCATATCCAGTCGGTTTCGAAGCAACAACACTTGAAGACTacttaaaagataattataatgatgaGGACATGGAGCTGGAACAAAGCAGCGGTATGATAGTGGAACGAGCACGCTCTCTCACACCCTTGTCTACGAGTATGACTGGTGAATCTGTGTTGAAAGCTCGTCGTAGTAAAGTACCAAATTCGCCTTTGTCCGTGCGCTCTTCCTCATCATACTGTCATatggaggaggaagaagaagaggactCAGAGGCTGAAAGCTGCGGCAGTTGTCATTCCAATGAAAAGGACGACGAGGAAGATGATGAAGAAGATCAAATATTGATGGATAGCTCAGCTCATCAGATGATTGAAGACCATGAGCGCGATGAGAAAAAACAGGTATTGCACGCCGAAGAAAGCAAGGCCACAGTTACCACTGAAATAGTGCAACAGCAACGACTACATCATCCACAGGATCAACCTGCAGATTTTCGAACGCAGTGTCTAATGGCCGATCATTACTCTTCTAACCAGTTTCCGTTGGAACACCATTCAGCGTCACAGCAACAGTCGTCTGTTTCGGTGCACCACGAGACTTATCCACTGTCAAATAGTGAAATTTCACAAAACTTACTGAATATGTCTGAATGTGCAGATCCAACCACAAGTGCGGATTCAAAAAGCTTCTCTAGTTCGAGCAAGTCGTTGATTCAGAAACCATCAACGGAACTGCTAAACATCAGTGAAGATGCACATGCAGGTCCAATGAACGTTTTTGAATTCGACGGGTTACAAATACTTGTGCCAAGTACATTTATCAGTGAATCATCGCAGAAGGCCGTAAGTGGGACGAGTCAACAATCGATGTCTAGTAGTGAAAATGGAGCAGGCAATGACGAGGAAGTTAAAAGCGTAAATATGAGGGCTGACGAAACAATGCCACCTAGAGGCGAACTGTCTGAGCAGGAGAGCAATGGATGTACCGAACCGTCGGCTTGgcagTTATACATGGGTCAAGAATCTTCGCGGATGTCGACATCTTATGATCTGATGGCACGAGAAAGCTGGGAAGAATCCGAAGGCTCCGATCACGAAGACAACAATGCTGGTCCTCTGCTCGACAGCCGTTCTTTAGCAACTCACTTCACCTCAAGTTTGTTCTTGGACCGTGATCGTAAAACGCCAACCCGACGCGTTTTCAAGTGTTCGCACTGTCCAGAGGTATTCGAGTGTCCAAAAGAGCGTCGTGTGCACAGTACGATGGTACACAAGGAGGCAGGACCTTCCGGATGCAGCAATGACAATATGGATAATCAATCCGAGCTGAGAGATCTTAAGCTGCTTGACGGACGTGCTAACGTCTTCGATGATCTTTTTGTGCCTAGCGGGTTGCATGTACAACAGACGTATCTCCAACATCATCAGCAGCCGCTTTTGCATCAGCTCCAGCCACCTCAGCATTCGAGCTCCGCTAAATCCGAAACAGATGCTAAAATTGATTCCTTACATTTGTCCACGGTGAATGAGGTAACATGCAATATGTGTAATCAACGTTTCAGCAGCGAGAAATCTCTGCAAATTCATCAGAGAAGGATGCACATGTCTGAGCCGTCAAAGCGAGTGCGAGAGAACGCGAAATGCCAAATCTGCAGCGAAGAATTTACTTCTGTTGCCTCGTTCAATCTTCATCTGAAAATTCATCCGCTCGAGTGTGGACAGTGTGGCAAATACTTTTAtcgcaaacaaaatttcaagctgCACATGAAGCGACATTTAGGGATAAAACCTTTCCCATGCACAGTCTGCGAAAAGGCTTTCCTTACGAAACAGAAGCTTGATGAACATACCAACGGTCACACTGGCAACGCCCCTGTTAAGTGTAACTTGTGTAACGAGACATTCAGACGCTACTCGAACCTTACGCAACACAAGAATCGTCATCAcctcaatattaaaaagaaactgaaaGACTATATCTGCCATTGCGGCGAAGTTTTTCACACAAAAAAGAAGCTTGCCTGGCACAAGGAAACGCACGATGAGAAACCCAAGGCGTGTACCTACTGTAACGAGCGCTTTATACACATGGCTAGTTTAACTAGACACATGCGAAGGGCCCATAACCGTAGGTTCGTGCCTGATGCtcagagagagaatgagaatgTCGAGTGTCCTATTTGCAAATGCATTTATCTTAGGTCATCCCTCGCTGTGCATATGCGCGTTCATAATGGAGAAAGACCTTACGAGTGCCAGGTATGTTCTAAGGCCTTCAGTACCAAATGGAACTTACAGCTGCACAAGTGGACTCATGCCGCTCGTAGCACGAAGCCTTTCAAGTGTAACCAGTGTAGTGCTGCTTTCTATCGGCACAGCGACTATACGGCTCACATGAACTCTCACAGGAATGTCAGGCCATATACCTGTAATTATTGCGGGGCTCAGTTCATCAGAAAATACAATTGCTTGCGGCACGTCAAAGAACACGAAGAAAACAAGGCATACACGTGTGACGTATGCAGTAAGACTTTCCACAGATCTTACTATTTAAAGGAGCACTTGAGGGTACATTCTGGAGCGAGACCTTATACTTGTCACATATGCGGTAAATCTAGCAGCACAAAGTCCAATCATAATAAACACGTCAGGATTCATCATGCGCGTGAGCCTGTAAATACGGaaaattaa
Protein Sequence
MDLSTAVSAMSAGLPQNGGGVGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGAGASALLSQNRAPQPPSQPQTPVLAPTPTAALPPGPATPQQQQQPPAASPGPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAAPTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMMPTSTATLPTTVPAVTPRMRPATSTSNVASVNETTASPPRPVSCAQQLPSPLAALSAAQQPQQPEPEEEPQSQQQNLILEPTQIVREIENGPDSILPDLEMPPSPEPPSTEVENEQNVIHAEQQIQNSCSHVEQRHAQQYQREDSRTLINNTSDDNADDDKTERILPDIEDNDEIESLLVRQTEVVEIDKETEIQVEQSIEHMETSVEESTRENDVENIPNNTEEISKNLEDKTDNVEVIEERTEPHDLTMSVDKTRIPNIKKPEIEQLSRLIVNMESEFNNVELSNKDDEGVLERSQEVIENALSAEHAVEKHPEEDEATNASYNKTTSEPTECKIIVSHEDTDVSSVSSSDSLRCDMEIDKIITPSYQYKYSQSCPTSPISKKKFWRSLSRASLRYDFGRSNENMCSYPVGFEATTLEDYLKDNYNDEDMELEQSSGMIVERARSLTPLSTSMTGESVLKARRSKVPNSPLSVRSSSSYCHMEEEEEEDSEAESCGSCHSNEKDDEEDDEEDQILMDSSAHQMIEDHERDEKKQVLHAEESKATVTTEIVQQQRLHHPQDQPADFRTQCLMADHYSSNQFPLEHHSASQQQSSVSVHHETYPLSNSEISQNLLNMSECADPTTSADSKSFSSSSKSLIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEDNNAGPLLDSRSLATHFTSSLFLDRDRKTPTRRVFKCSHCPEVFECPKERRVHSTMVHKEAGPSGCSNDNMDNQSELRDLKLLDGRANVFDDLFVPSGLHVQQTYLQHHQQPLLHQLQPPQHSSSAKSETDAKIDSLHLSTVNEVTCNMCNQRFSSEKSLQIHQRRMHMSEPSKRVRENAKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCEKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCSKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692334;
90% Identity
iTF_00692334;
80% Identity
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