Basic Information

Gene Symbol
ZFX
Assembly
GCA_900480035.1
Location
UELX01004212.1:2096-7764[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.9 2.1e+02 3.2 0.1 3 23 26 46 25 46 0.94
2 15 1.2 1.3e+02 3.9 2.6 1 20 1005 1024 1005 1028 0.76
3 15 2.8e-05 0.0031 18.4 1.5 2 23 1116 1138 1115 1138 0.97
4 15 0.0028 0.31 12.1 0.3 2 23 1151 1172 1151 1172 0.98
5 15 2e-05 0.0023 18.8 2.3 2 23 1175 1196 1174 1196 0.97
6 15 0.05 5.6 8.2 0.3 1 23 1202 1224 1202 1224 0.95
7 15 2.8e-05 0.0031 18.4 4.5 2 23 1231 1252 1230 1253 0.95
8 15 0.12 14 6.9 3.7 5 23 1266 1284 1265 1284 0.97
9 15 2.5e-05 0.0028 18.5 1.5 3 23 1291 1312 1290 1312 0.97
10 15 0.011 1.3 10.2 0.3 2 23 1328 1348 1327 1348 0.97
11 15 7.6e-05 0.0085 17.0 0.7 1 20 1354 1373 1354 1376 0.92
12 15 9.4e-05 0.011 16.7 2.7 1 23 1384 1406 1384 1406 0.99
13 15 0.0026 0.3 12.2 3.2 1 23 1412 1434 1412 1434 0.97
14 15 1.2e-05 0.0014 19.5 3.8 1 23 1440 1462 1440 1462 0.99
15 15 0.00034 0.039 15.0 7.2 1 23 1468 1490 1468 1491 0.96

Sequence Information

Coding Sequence
atGGATCTCAGCACAGCTGTGAGTGCGATGTCGGCAGGAGTACCGCAGAATGGAGGCGGCGCCGGGGCAGTGGCCTGCCCGGTCTGCACGCTCTACCTACGCGAGGGCATCAGCCTGCAGAAGCACTTGGACACTCATCCCAAGGAGCAGGTGATCGAGGCGCTCATCCGGGCCAGCAGCGCCGGCGCTGGCGCCTCGGCTCTGCTCAGCCAGAATCGCGCGCCGCAGCCACCGTCGCAGCCGCAGACGCCGGTGCTGGCACCAACGCCAACCCCTGCGCTGCCGCCTGGTCCAGCCACGCCGCAGCAGCAACAGCCTCCGGCAGCCTCGCCGGGTCCACATGTTCCTCACGCCCAGTCGCCCTACCCGATTGGGCCAATATTTGAGTGTCCGCCTATCAACGCTATGATACCGCCACCTCAATTCGCGTCTTTTAGCTACCAGCAGTTTGTTAATAACGGCACGATGATGATACCCGCACAGTACGCGATGGCCCAGGCGCAGGCCGCTCCAACCAGCCAAATGATGCAGATGCTGTACAGCCCTTATGGCATGTACCACCAGCAACAGATTCCTACGGTCCAGATGATTTCAGCGCCACCGATGATGCCAACCTCAACAGCGACGCTGCCGACGACGGTGCCTGCAGTCACGCCGCGCATGAGGCCAGCTACGAGCACGAGCAACATCGCGCCCGTCAACGAGACGACGGCGTCGCCGCCGAGACCTGTCTCGTGCGCACAGCAACTGCCTTCACCGCTAGCAGCGTTGTCTGCGGTACAGCAACCGCAACAGCCGGAACCAGAAGAGGAACCACAATCGCAACAGCAAAATCTTGTTTTGGAGCCGACACAAATTGTGCGGGAAATCGAAAGTGGACCCGATAGTATATTGCCGGATTTGGAGATGCCTCCGTCGCCTGAGCCACCGAGTACCGAGGTAGAGAGTGAACAGAATGTCATTCATGCAGAGCAGCAGATTCAGAATAGCTGTTCGCAGGTAGGACAGCGACACGCACAGCAATATCAGAGGGAGGATTCACGAACATTAATCAATAATACTAGCGATGATAATGCTGACGATGATAAGACTGAAAGAATCCTACCTGATATTGAAGATAATGATGAAATTGAATCACTTTTAGTGCGGCAGACGGAAGTAGTAGAAATTCACAAAGAAACCGAAATTCAAGTAGAACAGTCTATTGAACACATGGAGACGTCGGTTGAAGAATCGACTAGGGAGAATGATGTAGAAAATATCcctaataataaagaagaaattagcaaaaatttagAAGATAAAACTGATAATGTTGAAGTCATCGAGGAAAGAATAGAACCTCATGATCTAACAATGTCAGTTGATAAGACTCGAATTCCTAACATCAAAAAACCCGAAATAGAACAATTAAGCAGATTAATTGGAAATATGGAATCAGAATTTAACAACGTAGAGTTATCCAACAAAGATGATGAGGAAGTCCTTGAACGATCTCAGGAAGTTATCGAAAATGCTTTGTCACCGGAACCTGCTGTTGAAAAGCATCCAGAGGAGGATGAAGCGACCAATGCATCATATAACAAAACAACTAATGAACCTACTGagtgtaaaattattgtttcccATGAAGATACAGATGTTTCATCCGTATCATCGTCAGATTCATTACGATGTGATatggaaattcaaaaaattatcacacCCTCTTATCAGTACAAGTATTCTCAATCGTGCCCTACTTCTCCCCTCAGTAAAAAGAAGTTTTGGCGTTCTCTTTCGCGCGTCTCTCTACGTTACGACTTAGGCCGTTCAAATGAGAATATATGCTCATATCCAGTCGGTTTCGAAGCAACAACACTTGAAGACtacttaaaagataattataatgatgAGGACATGGAGCTGGAACAAAGCAGCGGTATGATAGTAGAACGAGCACGCTCTCACACACCCTTGTCTACCAGTATGACCGGTGCATCTGTGTTGAAAGCTCGTCGCAGTAAAATACCAAATTCGCCTTTGTCCATGCGCTCTTCCTCATCATACTGTCATatggaggaagaagaagaagaagactcAGAGGCTGAAAGCTGTGGCAGTTGTAATTCCAATGAAAAAGACGACGAGgaagatgatgaagaagatCAAATATTGATGGATAGCTCAGCTCATCAGATGATTGAAGACAATGAGCGCGATGAGAAAAAACAGGTATTGCACGTTGAAGAAAGCAAGGCCACAGTTACCACTGAGATAGTGCAACAGCAACGCCTACATCATCCACAGGATCAACCTGCAGATTTTCGAACACAATGTCTAATGGCCGATCATTACTCTGCTAATCAATTTCCACTGGATCATCATCCAACGTCGCAGCAACAGTCGTCTGTTTCGGTGCACCATGAGACTTATCCACTGtcaaatagtgaaatttcacAAAACTTACTGAATATGTCTGAATGTGCAGATCCAACTACAAGTGCGGATTCAAAAAGCTTTTCTAGCTCGAGCAAGTCGTCGATTCAGAAACCATCTACGGAACTGCTGAACATTAGTGAAGATGCACATGCAGGACCAatgaatgtttttgaatttgacGGGTTACAAATACTTGTGCCAAGTACATTTATCAGTGAATCATCACAGAAGGCCGTAAGTGGGACGAGTCAACAATCGATGTCTAGTAGTGAAAATGGAGCAGGCAATGATGAGGAAGTTAAGAGCGTAAATATGAGGGCTGATGAAACAATGCCACCTAGAGGCGAACTGTCTGAGCAGGAGAGCAATGGGTGTACCGAGCCGTCGGCTTGgcagttATACATGGGTCAAGAATCTTCGCGGATGTCGACATCTTATGATCTGATGGCACGTGAAAGCTGGGAAGAATCCGAAGGCTCCGATCACGAAGAGAACAATGCTGGCCCTCTGCTCGACAGCCGTTCTTTAGCAACTCACTTCACCTCAAGTTTGTTCTTGGACCGCGATCGTAAAACGCCTACCCGACGCGTTTTTAAGTGTTCGCACTGTCCGGAAGTATTCGAGTGTCCAAAAGAGCGTCGTGTGCACAGTACAATGGTACACAAGGAGGCTGGACCTTCCGGATGCAGCAATGACAATATGGATAATCAATCCGAGCTGAGAGATCTTAAGCTACTTGACGGACGTGCTAACGTCTTCGATGATCTTTTTGTGCCTAGTGGGTTGCATGTACAACAAACGTATCTTCAGCATCATCAGCAGCCGCTTTTGCATCAGCTCCAGCCACCTCAGCATTCGAGCTCTGCTAAATCTGAAACAGATGCTAAAATTGATTCCTTACATTTGTCCGCGGTGAATGAGGTAACATGCAATATGTGTAATCAACGTTTCAGCAGCGAGAAATCTCTGCAAATTCATCAGAGACGGATGCACATGTCTGAGCCGTCAAAGCGAATACGGGAGAACGCGAAATGCCAAATCTGCAGCGAAGAATTTACTTCTGTTGCCTCGTTCAATCTTCATCTGAAAATTCATCCGCTCGAGTGCGGACAGTGTGGTAAATACTTTTATCGCAAACAAAATTTCAAGCTGCATATGAAGCGACATTTAGGGATAAAACCTTTCCCATGCACAGTCTGTGAAAAGGCTTTCCTTACTAAACAGAAGCTTGATGAACATACCAACGGTCACACTGGCAACGCCCCTGTCAAGTGTAACTTGTGTAACGAGACGTTCAGACGCTACTCGAACCTTACGCAACACAAGAATCGTCATCAtctcaatattaaaaagaaactaaaagaCTATATCTGCCATTGTGGCGAAGTTTTTCACACAAAAAAGAAGCTTGCCTGGCACAAAGAAACGCACGATGAGAAACCCAAGGCGTGTACCTACTGTAATGAGCGCTTTATACACATGGCAAGTTTAACTAGACACATGCGACGGGCCCATAACCGTAGGTTCGTGCCTGATGCtcagagagagaatgagaacgTCGAGTGTCCTATTTGCAAATGCATTTATCTTAGGTCATCCCTTGCTGTGCATATGCGCGTTCACAATGGAGAAAGACCTTATGAGTGCCAGGTATGTTCTAAGGCCTTCAGTACCAAATGGAATTTACAGCTGCACAAGTGGACTCATGCCGCTCGTAGCACGAAGCCTTTCAAGTGCAACCAGTGCAGTGCTGCTTTCTATCGTCACAGCGACTACACGGCTCACATGAACTCTCACAGGAATGTCAGGCCATATACCTGTAATTATTGCGGGGCTCAGTTCATCAGAAAATACAATTGCTTGCGGCACGTTAAAGAACACGAAGAAAACAAGGCATACACCTGTGACGTATGTAGTAAGACTTTCCATAGATCTTACTATTTAAAGGAACACTTGAGGGTACATTCTGGAGCAAGACCTTATACTTGTCACATATGCGGTAAATCTAGCAGCACAAAGTCCAATCATAATAAACACGTCAGGATTCATCATGCGCGTGAGCCTGTAAATACggaaaattaa
Protein Sequence
MDLSTAVSAMSAGVPQNGGGAGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGAGASALLSQNRAPQPPSQPQTPVLAPTPTPALPPGPATPQQQQPPAASPGPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAAPTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMMPTSTATLPTTVPAVTPRMRPATSTSNIAPVNETTASPPRPVSCAQQLPSPLAALSAVQQPQQPEPEEEPQSQQQNLVLEPTQIVREIESGPDSILPDLEMPPSPEPPSTEVESEQNVIHAEQQIQNSCSQVGQRHAQQYQREDSRTLINNTSDDNADDDKTERILPDIEDNDEIESLLVRQTEVVEIHKETEIQVEQSIEHMETSVEESTRENDVENIPNNKEEISKNLEDKTDNVEVIEERIEPHDLTMSVDKTRIPNIKKPEIEQLSRLIGNMESEFNNVELSNKDDEEVLERSQEVIENALSPEPAVEKHPEEDEATNASYNKTTNEPTECKIIVSHEDTDVSSVSSSDSLRCDMEIQKIITPSYQYKYSQSCPTSPLSKKKFWRSLSRVSLRYDLGRSNENICSYPVGFEATTLEDYLKDNYNDEDMELEQSSGMIVERARSHTPLSTSMTGASVLKARRSKIPNSPLSMRSSSSYCHMEEEEEEDSEAESCGSCNSNEKDDEEDDEEDQILMDSSAHQMIEDNERDEKKQVLHVEESKATVTTEIVQQQRLHHPQDQPADFRTQCLMADHYSANQFPLDHHPTSQQQSSVSVHHETYPLSNSEISQNLLNMSECADPTTSADSKSFSSSSKSSIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEENNAGPLLDSRSLATHFTSSLFLDRDRKTPTRRVFKCSHCPEVFECPKERRVHSTMVHKEAGPSGCSNDNMDNQSELRDLKLLDGRANVFDDLFVPSGLHVQQTYLQHHQQPLLHQLQPPQHSSSAKSETDAKIDSLHLSAVNEVTCNMCNQRFSSEKSLQIHQRRMHMSEPSKRIRENAKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCEKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCSKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692334;
90% Identity
iTF_00692334;
80% Identity
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