Eazu022663.1
Basic Information
- Insect
- Eupelmus azureus
- Gene Symbol
- -
- Assembly
- GCA_030522685.1
- Location
- JAPYZA010018446.1:1-3757[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.5 1e+02 5.3 0.2 1 23 89 112 89 112 0.94 2 16 2.2 4.7e+02 3.3 1.7 2 23 292 314 291 314 0.94 3 16 7 1.5e+03 1.7 3.2 2 23 345 367 345 367 0.91 4 16 0.071 15 8.0 0.3 2 23 409 431 408 431 0.96 5 16 3.8 7.9e+02 2.6 0.9 1 23 459 482 459 482 0.94 6 16 0.018 3.7 9.9 1.5 1 23 497 520 497 520 0.96 7 16 0.051 11 8.4 0.3 1 23 530 553 530 553 0.96 8 16 0.0056 1.2 11.5 0.2 1 23 569 591 569 591 0.98 9 16 0.02 4.2 9.7 2.0 1 23 604 627 604 627 0.96 10 16 0.05 10 8.5 2.7 1 23 644 667 644 667 0.96 11 16 6.5e-06 0.0014 20.7 1.3 1 23 673 696 673 696 0.95 12 16 0.00052 0.11 14.7 1.2 3 23 703 724 701 724 0.93 13 16 0.004 0.83 11.9 1.9 1 23 729 752 729 752 0.97 14 16 1.1e-07 2.2e-05 26.3 0.3 2 23 759 780 758 780 0.97 15 16 9e-06 0.0019 20.3 0.7 1 23 786 808 786 808 0.98 16 16 6.6e-07 0.00014 23.8 0.3 1 23 814 836 814 836 0.98
Sequence Information
- Coding Sequence
- GACTCACGGCGCTTCGTCTTCCAGAAGAAGCTGATCAAGCTACCACTTAAGGTGACTGAGAAAGTAGCTGCGGCTGCCGCAAAGTTTGTCTCTGAGCAAGCAGCAACTCCCATACCCGAGGTGAAGCTTGAGCCTCCGGAGAACAACAACGACTTCGAGGAGGTGTCGATCGATGGCAGCGACTACAAGTCTGACGCTTCTACGAATCCGTCTCGGACGAAAGTGGCAACAACGAGCGGCAGCAGCTCCGACGAAATCGTCGTGTTCATGTGCAAGGCGTGCAAGGTGTACTTCCCTCTGCGTAGCATGCTGGTCCAACACGCGGAGAAGGTACACGGCAGTCTGATAAAGAAAAAACCGTCGCTGCGGCCGAGCATGACGATCACGAAAAAGCAGAAACCGGCAGTGACGATCGTCAAAAAGCTCGTACAGGTGAACCAGAAGGAGCTGGAGAAGTACAAGCCGTCAAAAATAGTTGTCATTAAGCCTACGAGTCCAGTAACAGATTCGACGAGAACAAAGAAGCCTGACTTTGTAACCGTGACGAAGGTCCAGAAACCAAAGTCTAACAAGTCCGAGGTTGATGATCTCGGTACGGTGTACTTCGACGGCTACTGCAGACTTAAGAGCGGCAAGTACGTGTGCAACTTCTGCGAGTACGAGTCGTTCGTGCGCACGACTGTCTCCTCGCACTCGAAGCGCAAACATGCTGAGGCCTGGTCCGCTGCCGTCATGGACATGAATGCCTCCGCAGATCATGCGGAAGGTGAAGAGTTCGAAGTGGAAAACATAGAATCCGAGGAAGAAGACGAGAACGCGGAAGAGTACGAATCAAACGTCGTTGAGGAAGAGGAAAGTTTCGACTCAATAAAGGTTTGCCCGTGCTGTCCATTTAGCACAAATAGCTCGGTTACCTATCAGATTCACGTTAAGCGTCGACATCGTGACTTTTGGCTCAAGTCCTTGGCTAATAAAGTGGCCGCTCTCTCGTCCGCCACCGAAATCAGGGAGCCGCCACCACCGGGTATTCGCCAGTGTCAGCACTGCCCATTTCAGTCTAAGAACCGCTCGACTATTTACATGCACACGGTTCGCAAGCACGGTCAGGAAAAAACTGACGATTTCGAGGAACCCTTAGTTGAAGAAATCCTCAATCCAATGGAGGTTGGAGAAGACGCCGGCATCGAGGACTCGGAGGAGATGGTTGAGGACGGCGAGCTACAAAAGTGTCCCTACTGCCCATTCGAGACCAAGGTGCTCTCGACCATAAGATCGCACATCGCTCGACGTCACCGTTACAAAGAGGCGTCTAATCGGTTGAAAAAATCCGGATTGATTGCTAAAGCAAAGGCAAGCCCCCAGCTGTACACGGGCTATGCTTGTTCGTTCTGCACTTTCGTGGCGGCGACTGTGTCCTCGATCAACCACCACACAACGCGTGAGCACTCGGGTGAGAAGCAGCCACTAAACGAGGTACCCGTCACCGAGTTCGATTGCGACCAGTGTGATTTTAAGTCTAGGAACCGTAAGCTCATGCAGATGCATATAAAGTCCTTGCACACGGCTCAAGCAAACGCTGATGGTATGTACACCTGTCCTATGTGCTCGTACGAGACGTTGACTAATATGGGCCTGCAGCGTCATATTTCGATAAAGCATAACAAGCTGAGGCGCGATGCCGACGCGAAGATAGTCAGGGAGGTCTACGAGTGCGATGAGTGCGAATACAACAGCCCGAATCTCAAGTTGCTAGAATGGCACAAACGGCAGCACTGCGCGTCTGGTGATGCCGAGAATATCGGTAATACGTTCTTCTGTAATGACTGCGATTTTAGCACCTGGACTAAGAACCAACTGTTCGTACATATCAAGAGAAAGCACAGAGATACTGAGGGAACTAAGCAGGAGCTAGATCCGGATGAGCATAGATTTACCTGTGATCAGTGCGATTATACGAGCAAGAGTAAGCATGTAATGAAGGTTCACGTTATAAGAAAGCACACAAATGAATATAATCACGAGTGCGAGATCTGTGGTAAGAAGTATAAAGTCAAAGCTGATCTAACGAATCATATAAGATTCCAGCACAGAGAACAGCCGATCATCTGTGACGTCTGTGGCAAGACCTGCAGGAATAGCAATTTGCTCTATTTGCATCAAAAGTTTGCGCACTACAAACCGGATTTCGAGTGTCACATATGCCATCGTCGAATGGTTAGTCAGGCCAATCTAGATGAGCATATCTTAAAGCAGCATGAGCAAAGGGAAGATGTCGTGTGTGAAGAGTGCGGTAAAACATTTACGAGACAAGCTAGATTGAAGATCCACATGAGGATACACACTGGTGTTAAACCATATACGTGTAAGATCTGTTTCAAGGCTTTTGCGAGGAGGAACGGATTAAGACAGCATTTGCTTATACATACCGGGCAGCGTCCGTACATCTGCGACATCTGCGGAAAAGCTTTTACCCAGAAGACAGGCTTGATCAGTCATAGGAAGAGTCATCCAGGCAACCATCCGCCCCTACCTAGAGTCACGATAGATCATGTACTGTCGGAATTCCTTAACGAGGAAGAGGAAGAGGCTTAA
- Protein Sequence
- DSRRFVFQKKLIKLPLKVTEKVAAAAAKFVSEQAATPIPEVKLEPPENNNDFEEVSIDGSDYKSDASTNPSRTKVATTSGSSSDEIVVFMCKACKVYFPLRSMLVQHAEKVHGSLIKKKPSLRPSMTITKKQKPAVTIVKKLVQVNQKELEKYKPSKIVVIKPTSPVTDSTRTKKPDFVTVTKVQKPKSNKSEVDDLGTVYFDGYCRLKSGKYVCNFCEYESFVRTTVSSHSKRKHAEAWSAAVMDMNASADHAEGEEFEVENIESEEEDENAEEYESNVVEEEESFDSIKVCPCCPFSTNSSVTYQIHVKRRHRDFWLKSLANKVAALSSATEIREPPPPGIRQCQHCPFQSKNRSTIYMHTVRKHGQEKTDDFEEPLVEEILNPMEVGEDAGIEDSEEMVEDGELQKCPYCPFETKVLSTIRSHIARRHRYKEASNRLKKSGLIAKAKASPQLYTGYACSFCTFVAATVSSINHHTTREHSGEKQPLNEVPVTEFDCDQCDFKSRNRKLMQMHIKSLHTAQANADGMYTCPMCSYETLTNMGLQRHISIKHNKLRRDADAKIVREVYECDECEYNSPNLKLLEWHKRQHCASGDAENIGNTFFCNDCDFSTWTKNQLFVHIKRKHRDTEGTKQELDPDEHRFTCDQCDYTSKSKHVMKVHVIRKHTNEYNHECEICGKKYKVKADLTNHIRFQHREQPIICDVCGKTCRNSNLLYLHQKFAHYKPDFECHICHRRMVSQANLDEHILKQHEQREDVVCEECGKTFTRQARLKIHMRIHTGVKPYTCKICFKAFARRNGLRQHLLIHTGQRPYICDICGKAFTQKTGLISHRKSHPGNHPPLPRVTIDHVLSEFLNEEEEEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690540; iTF_00693253; iTF_00692351;
- 90% Identity
- iTF_00690540; iTF_00693253; iTF_00692351;
- 80% Identity
- -