Eann002530.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- -
- Assembly
- GCA_900480025.1
- Location
- UDEW01010503.1:919-3576[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.47 41 5.3 0.2 1 23 111 134 111 134 0.94 2 16 2.1 1.9e+02 3.2 1.7 2 23 314 336 313 336 0.94 3 16 6.5 5.8e+02 1.7 3.2 2 23 367 389 367 389 0.91 4 16 0.067 5.9 8.0 0.3 2 23 431 453 430 453 0.96 5 16 3.5 3.1e+02 2.5 0.9 1 23 481 504 481 504 0.94 6 16 0.017 1.5 9.9 1.5 1 23 519 542 519 542 0.96 7 16 0.048 4.3 8.4 0.3 1 23 552 575 552 575 0.96 8 16 0.0052 0.46 11.4 0.2 1 23 591 613 591 613 0.98 9 16 0.019 1.7 9.7 2.0 1 23 626 649 626 649 0.96 10 16 0.047 4.1 8.5 2.7 1 23 666 689 666 689 0.96 11 16 6.1e-06 0.00054 20.7 1.3 1 23 695 718 695 718 0.95 12 16 0.00049 0.043 14.7 1.2 3 23 725 746 723 746 0.93 13 16 0.0037 0.33 11.9 1.9 1 23 751 774 751 774 0.97 14 16 1e-07 8.9e-06 26.3 0.3 2 23 781 802 780 802 0.97 15 16 8.4e-06 0.00074 20.2 0.7 1 23 808 830 808 830 0.98 16 16 6.2e-07 5.5e-05 23.8 0.3 1 23 836 858 836 858 0.98
Sequence Information
- Coding Sequence
- ATGCTGTACGGTCCCGCATTTCTGCCAAATCACTTTACTaaccattttttctttctgattTTCAGGGACTCACGGCGCTTCGTCTTCCAGAAGAAGCTGATCAAGCTACCACTTAAGGTGACTGAGAAAGTAGCTGCGGCTGCCGCAAAGTTTGTCTCTGAGCAAGCAGCAACTCCCATACCCGAGGTGAAGCTTGAGCCTCCGGAGAACAACAACGACTTCGAGGAGGTGTCGATCGATGGCAGCGACTACAAGTCTGACACTTCTACGAATCCGTCTCGGACGAAAGTGGCAACAACGAGCGGCAGCAGCTCCGACGAAATCGTCGTGTTCATGTGCAAGGCGTGCAAGGTGTACTTCCCTCTGCGTAGCATGCTGGTCCAACACGCGGAAAAGGTACACGGCAGtctgataaagaaaaaaccgtCGCTGCGGCCGAGCATGACGATCACGAAAAAGCAGAAACCGGCAGTGACGATCGTCAAAAAGCTCGTACAGGTGAACCAGAAGGAGCTGGAGAAGTACAAGCCGTCAAAAATAGTTGTCATTAAGCCTACGAGTCCAGTAACAGATTCGACGAGAACAAAGAAGCCTGACTTTGTAACCGTGACGAAGGTCCAGAAACCAAAGTCTAACAAGTCCGAGGTTGATGATCTCGGTACGGTGTACTTCGACGGCTACTGCAGACTTAAGAGCGGCAAGTACGTGTGCAACTTCTGCGAGTACGAGTCGTTCGTGCGCACGACTGTCTCCTCGCACTCGAAGCGCAAACATGCTGAGGCCTGGTCCGCTGCCGTCATGGACATGAATGCCTCCGCAGATCATGCGGAAGGTGAAGAGTTCGAAGTGGAAAACATAGAATCCGAGGAAGAAGACGAGAACGCGGAAGAGTACGAATCAAACGTCGTTGAGGAAGAGGAAAGTTTCGACTCAATAAAGGTTTGCCCGTGCTGTCCATTTAGCACAAATAGCTCGGTTACCTATCAGATTCACGTTAAGCGTCGACATCGTGACTTTTGGCTCAAGTCCTTGGCTAATAAAGTGGCCGCTCTCTCGTCCGCCACCGAAATCAGGGAGCCGCCACCACCGGGTATTCGCCAGTGTCAGCACTGCCCATTTCAGTCTAAGAACCGCTCGACTATTTACATGCACACGGTTCGCAAGCACGGTCAGGAAAAAACTGACGATTTCGAGGAACCCTTAGTTGAAGAAATCCTCAATCCAATGGAGGTTGGAGAAGACGCCGGCATCGAGGACTCGGAGGAGATGGTTGAGGACGGCGAGCTACAAAAGTGTCCCTACTGCCCATTCGAGACCAAGGTGCTCTCGACCATAAGATCGCACATCGCTCGACGTCACCGTTACAAAGAGGCGTCTAATCGGTTGAAAAAATCCGGATTGATTGCTAAAGCAAAGGCAAGCCCCCAGCTGTACACGGGCTATGCTTGTTCGTTCTGCACTTTCGTGGCGGCGACTGTGTCCTCGATCAACCACCACACAACGCGTGAGCACTCGGGTGAGAAGCAGCCACTAAACGAGGTACCCGTCACCGAGTTCGATTGCGACCAGTGTGATTTTAAGTCTAGGAACCGTAAGCTCATGCAGATGCATATAAAGTCCTTGCACACGGCTCAAGCAAACGCTGATGGTATGTACACCTGTCCTATGTGCTCGTACGAGACGTTGACTAATATGGGCCTGCAGCGTCATATTTCGATAAAGCATAACAAGCTGAGGCGCGATGCCGACGCGAAGATAGTCAGGGAGGTCTACGAGTGCGATGAGTGCGAATACAACAGCCCGAATCTCAAGTTGCTAGAATGGCACAAACGGCAGCACTGCGCGTCTGGTGATGCCGAGAATATCGGTAATACGTTCTTCTGTAATGACTGCGATTTTAGCACCTGGACTAAGAACCAACTGTTCGTACATATCAAGAGAAAGCACAGAGATACTGAGGGAACTAAGCAGGAACTAGATCCGGATGAGCATAGATTTACCTGTGATCAGTGCGATTATACGAGCAAGAGTAAGCATGTAATGAAGGTTCACGTTATAAGAAAGCACACAAATGAATATAATCACGAGTGCGAGATCTGTGGTAAGAAGTATAAAGTCAAAGCTGATCTAACGAATCATATAAGATTCCAGCACAGAGAACAGCCGATCATCTGTGACGTCTGTGGCAAGACCTGCAGGAATAGCAATTTGCTCTATTTGCATCAAAAGTTTGCGCACTACAAACCGGATTTCGAGTGTCACATATGCCATCGTCGAATGGTTAGTCAGGCCAATCTAGATGAGCATATCTTAAAGCAGCATGAGCAAAGGGAAGATGTCGTGTGTGAAGAGTGCGGTAAAACATTTACGAGACAAGCTAGATTGAAGATCCACATGAGGATACACACTGGTGTTAAACCATATACGTGTAAGATCTGTTTCAAGGCTTTTGCGAGGAGGAACGGATTAAGACAGCATTTGCTTATACATACCGGGCAGCGTCCGTACATCTGCGACATCTGCGGAAAAGCTTTTACCCAGAAGACAGGCTTGATCAGTCATAGGAAGAGTCATCCAGGCAACCATCCGCCCCTACCTAGAGTCACGATAGATCATGTACTGTCGGAATTCCTTAAcgaggaagaggaagaggCTTAA
- Protein Sequence
- MLYGPAFLPNHFTNHFFFLIFRDSRRFVFQKKLIKLPLKVTEKVAAAAAKFVSEQAATPIPEVKLEPPENNNDFEEVSIDGSDYKSDTSTNPSRTKVATTSGSSSDEIVVFMCKACKVYFPLRSMLVQHAEKVHGSLIKKKPSLRPSMTITKKQKPAVTIVKKLVQVNQKELEKYKPSKIVVIKPTSPVTDSTRTKKPDFVTVTKVQKPKSNKSEVDDLGTVYFDGYCRLKSGKYVCNFCEYESFVRTTVSSHSKRKHAEAWSAAVMDMNASADHAEGEEFEVENIESEEEDENAEEYESNVVEEEESFDSIKVCPCCPFSTNSSVTYQIHVKRRHRDFWLKSLANKVAALSSATEIREPPPPGIRQCQHCPFQSKNRSTIYMHTVRKHGQEKTDDFEEPLVEEILNPMEVGEDAGIEDSEEMVEDGELQKCPYCPFETKVLSTIRSHIARRHRYKEASNRLKKSGLIAKAKASPQLYTGYACSFCTFVAATVSSINHHTTREHSGEKQPLNEVPVTEFDCDQCDFKSRNRKLMQMHIKSLHTAQANADGMYTCPMCSYETLTNMGLQRHISIKHNKLRRDADAKIVREVYECDECEYNSPNLKLLEWHKRQHCASGDAENIGNTFFCNDCDFSTWTKNQLFVHIKRKHRDTEGTKQELDPDEHRFTCDQCDYTSKSKHVMKVHVIRKHTNEYNHECEICGKKYKVKADLTNHIRFQHREQPIICDVCGKTCRNSNLLYLHQKFAHYKPDFECHICHRRMVSQANLDEHILKQHEQREDVVCEECGKTFTRQARLKIHMRIHTGVKPYTCKICFKAFARRNGLRQHLLIHTGQRPYICDICGKAFTQKTGLISHRKSHPGNHPPLPRVTIDHVLSEFLNEEEEEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691392;
- 90% Identity
- iTF_00691392;
- 80% Identity
- -