Basic Information

Gene Symbol
kn
Assembly
GCA_030522685.1
Location
JAPYZA010006291.1:1-13060[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.72 1.1e+04 -4.0 1.6 453 494 76 119 66 132 0.62
2 2 9.5e-40 1.5e-35 124.4 0.0 41 116 189 264 169 273 0.90

Sequence Information

Coding Sequence
TGCGAAAATCTGAAGCTCCACGACAACAGCGGCGtcgacgctgctgctgctgctgctgctgccgctgccggcTCCTGGTGCAGCGAGCCATCGAGCATCGCCTACGAGGTATCCCTGCGCGGTAGGTTGGCATGGTGCAGGGGCCTCGCGACGGCGCAGCGGCCTCATAACGCCGGTCGTGGCTATCCGCGTGGCCAGCTCAACCCAGCCCAAACGCCAGCTCAGGCGACTTCTTCCAACGAGGGCTACGCGTACGGCCTCACGACGCGCTCCGACGAGTGGAACAGCCTCCTGCCCAGCTCCACAATCGTGGGTGCTGGCGGGTCGCCATGGCTGGGCCTGGGTGCTGCCGGTGGAGGCACCGGGAGCACCGCCGGAGGTGGCAGTCCCGTCGAGCTGGAGGGCCACTGGGGCAGGAAGCTGTACGGGGCCAGCGTGGCGCCACCTCCGCCGCCGCCTCATCACCATCCCAGGGCGCCCCTCGTCTTCGCACCCCAGGATATGAGGCAGATCTTGAAGGAGGAGCCCGTGCCCAGGGCCTGGCCCCAGCCAGCCATCGCGGACAATGGAACGGCTGTGGTCGGAAGAGCGCACTTCGAGAAACAGCCGCCCAGTAATCTGCGAAAGAGCAACTTCTTTCACTTCGTTATCGCCCTCTACGATCGTTCAGGCCAGCCGATAGAAATCGAACGAACGGCTTTCATCGGTTTCGTCGAGAAGGACcagGAATCAGAAGGTCAGAAGACGAACAACGGAATCCAGTATCGACTTCAGCTTCTGTATTCGAATgAGTCTAATCAAACCGTAGAATCACAAAAATCAACAACCCACACCGACCTTGCTCAGCCACTGCCCTAA
Protein Sequence
CENLKLHDNSGVDAAAAAAAAAAGSWCSEPSSIAYEVSLRGRLAWCRGLATAQRPHNAGRGYPRGQLNPAQTPAQATSSNEGYAYGLTTRSDEWNSLLPSSTIVGAGGSPWLGLGAAGGGTGSTAGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPAIADNGTAVVGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYSNESNQTVESQKSTTHTDLAQPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692696; iTF_00689952;
90% Identity
iTF_00689952;
80% Identity
-