Basic Information

Gene Symbol
kn
Assembly
GCA_900480035.1
Location
UELX01000067.1:76264-108163[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.57 7.6e+03 -4.7 1.7 453 494 81 124 72 136 0.61
2 2 9.4e-91 1.2e-86 291.8 0.1 41 182 194 335 176 335 0.95

Sequence Information

Coding Sequence
ATGGATTATTACGCTGAGGTTTCCATACGCAATCAGAAAGTTCTGCTCCACGACAACAGCGGCGTTGACGCTGCTGCTACTGCCGGCTCCTGGTGCAGCGAGCCATCGAGCATCGCCTACGAGGTATCCCTGCGCGGTAGGTTGGCATGGTGCAGGGGCCTCGCGACGGCGCAGCGGCCTCATAACGCCGGTCGTGGCTATCCGCGTGGCCAGCTCAACCCAGCCCAAACGCCAGCTCAGGCGACTTCTTCCAACGAGGGCTACGCGTACGGCCTCACGACGCGCTCCGACGAGTGGAACAGCCTCCTGCCCAGCTCCACAATCGTGGGTGCTGGCGGGTCGCCATGGCTGGGCCTGGGTGCCGCCGGTGGAGGCACCGGGAGCACCGCCGGAGGTGGCAGTCCCGTGGAGCTGGAGGGCCACTGGGGCAGGAAGCTGTACGGGGCCAGTGTGGCGCCACCTCCGCCGCCGCCCCATCACCATCCCAGGGCGCCCCTCGTCTTCGCGCCCCAGGATATGAGGCAGATCTTGAAGGAGGAACCCGTGCCCAGGGCCTGGCCCCAGCCAGCCATCGCGGACAATGGAACGGCTGTGGTCGGAAGAGCGCACTTCGAGAAACAGCCGCCCAGTAATCTGCGAAAGAGCAACTTCTTCCACTTCGTAATCGCCCTCTACGATCGTTCAGGCCAGCCGATAGAAATCGAACGAACGGCTTTCATCGGTTTCGTCGAGAAGGACcagGAATCAGAAGGTCAGAAGACGAACAACGGAATCCAGTATCGACTTCAGCTTCTGTATTCGAATGGTGTCAGGCAGGAGCAGGACATCTTCGTCAGGCTGATCGACTCCGTTACGAAACAGGCGATCATGTACGAAGGCCAGGACAAGAATCCAGAAATGTGCCGAGTCCTGCTCACCCACGAAGTCATGTGCAGCCGGTGTTGCGACAAGAAGAGCTGTGGAAATAGGAACGAGACGCCAAGCGATCCCGTCATCATCGATCGGTGA
Protein Sequence
MDYYAEVSIRNQKVLLHDNSGVDAAATAGSWCSEPSSIAYEVSLRGRLAWCRGLATAQRPHNAGRGYPRGQLNPAQTPAQATSSNEGYAYGLTTRSDEWNSLLPSSTIVGAGGSPWLGLGAAGGGTGSTAGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPAIADNGTAVVGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYSNGVRQEQDIFVRLIDSVTKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690883;
90% Identity
iTF_01465973;
80% Identity
-