Basic Information

Gene Symbol
kn
Assembly
GCA_900480025.1
Location
UDEW01000216.1:66078-94471[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.61 7.3e+03 -4.8 1.7 453 494 86 129 77 141 0.61
2 2 1.7e-70 2.1e-66 224.9 0.0 41 159 199 317 181 324 0.94

Sequence Information

Coding Sequence
ATGGATAGCGTGAAAATAAGAGTTTATGGGTGCGAAAATCTGAAGCTCCACGACAACAGCGGCGtcgacgctgctgctgctgctgctgctgccgctgccggcTCCTGGTGCAGCGAGCCATCGAGCATCGCCTACGAGGTATCCCTGCGCGGTAGGTTGGCATGGTGCAGGGGCCTCGCGACGGCGCAGCGGCCTCATAACGCCGGTCGTGGCTATCCGCGTGGCCAGCTCAACCCAGCCCAAACGCCAGCTCAGGCGACTTCTTCCAACGAGGGCTACGCGTACGGCCTCACGACGCGCTCCGACGAGTGGAACAGCCTCCTGCCCAGCTCCACAATCGTGGGTGCTGGCGGGTCGCCATGGCTGGGCCTGGGTGCCGCCGGTGGAGGCACCGGGAGCACCGCCGGAGGTGGCAGTCCCGTCGAGCTGGAGGGCCACTGGGGCAGGAAGCTGTACGGGGCCAGCGTGGCGCCACCTCCGCCGCCGCCTCATCACCATCCCAGGGCGCCCCTCGTCTTTGCACCCCAGGATATGAGGCAGATCTTGAAGGAGGAGCCCGTGCCCAGGGCCTGGCCCCAGCCAGCCATCGCGGACAATGGAACGGCTGTGGTCGGAAGAGCGCACTTCGAGAAACAGCCGCCCAGTAATCTGCGAAAGAGCAACTTCTTTCACTTCGTTATCGCCCTCTACGATCGTTCAGGCCAGCCGATAGAAATCGAACGAACGGCTTTCATCGGTTTCGTCGAGAAGGACcagGAATCAGAAGGTCAGAAGACGAACAACGGAATCCAGTATCGACTTCAGCTTCTGTATTCGAATgGTGTCAGGCAGGAGCAGGACATCTTCGTCAGGCTGATCGACTCCGTTACAAAACAGgcGATCATGTACGAAGGCCAGGACAAGAATCCAGAAATGTGCCGAGTCCTGCTCACCCACGAAGTCATGTGCAGGTTAGTCCCAACGACTTCACAATACAAACACGCACAATCATTCAAAGCTTTGCAAAAAGCATCGAATAAAATCGTGTCTTCTCCATCTTCCAACATCTTCGAGCAATGA
Protein Sequence
MDSVKIRVYGCENLKLHDNSGVDAAAAAAAAAAGSWCSEPSSIAYEVSLRGRLAWCRGLATAQRPHNAGRGYPRGQLNPAQTPAQATSSNEGYAYGLTTRSDEWNSLLPSSTIVGAGGSPWLGLGAAGGGTGSTAGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPAIADNGTAVVGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYSNGVRQEQDIFVRLIDSVTKQAIMYEGQDKNPEMCRVLLTHEVMCRLVPTTSQYKHAQSFKALQKASNKIVSSPSSNIFEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690883;
90% Identity
iTF_00690883;
80% Identity
-