Ejap034891.1
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_005406025.1
- Location
- BGZK01000873.1:30489-41119[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-77 1.7e-72 246.1 24.5 1 297 31 315 31 318 0.88 2 2 0.98 6.2e+04 -5.3 12.6 119 170 329 380 321 392 0.64
Sequence Information
- Coding Sequence
- ATGCGGCGACCCGGTGATCGTCGTGTAGAAGGTTTCGGACGTACAAATAACAAACGCCACGCGACAGCGGCGACAGAGGATAAACGTCACGCGGAACAGCGATTAGCGGCGCGACGAGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGCGAGCTGGAGAGACAGCAGCGCGAACAAGAAGACCATGCCGACAAAGCTTACGACATGTACACGGAGAGCGTCGGTCGGCGCGGGCGGCTGGCGGCGCTCAGCCCGGGCGCGCTGCACTCGCCCCGCCGTAGTTCCGAGGACTCCGCAGACGACGGCTTCTGCCTTAAGGACCTTAGACACGAGCTGAAAGAAGTAGAAGAGAAATTCAGGAAGGCGATGATTCTAAACGCACAATTGGACAACGACAAAGCGGCGCTTGCGTATCAACTGGAACTGCTCAAGGATCGGTTGGAAGAGCTGCAAGAGGAACATGCTCAATTACAGcgggaacacaaagaaaaatgttcAGCGTACGAACGATTGCGGAGGGAGCACGCCTCGCTGGAACGGGAAGTGACAGCGGCCAGGGACGCCGTGAGGGCCCGCGACACGGCCGCGCAGGCCGCCGGCTTCGCGTTCGTCGAGGCGGGGGTGGAGCCCTGCGACGAGGAGATGGCACCGGGCGAGGCCTGCGGGAGTGTGCCCGCGCTGGCGCTGGTCTCCCGGGAATCTGAACAGCTACTGAACGACGCAGGGGAAGGCACCCTGGATGTGCGATTGCAGAACATTTTAAATCAGAAACTGGGACTGGAGTCAGAAGTGCGCAAGCTGAAACTGCAACTGAACGAAGAGCGCGCCGCGCGCCACAATGGCGTCGCGCACGCGCACGACCACGAGTACGAGAACGAATTGGAAACATTGCGGAAATGCGTATCGGAAGCTAAGGCACGAGCCGCGCGAGCGGAGGCGGAGGCGGCGCTGCAGGGCGCGGCCGTGGCCCGGCTCGAGGCGCAGGTGTCGCGGCTCCGCGCGCGTCAGGACCACCAGGACGAGCACGAGGAGCAGCTGAAGCAGGAGCGCCGTCGGCTGCAGAGGGAGgcTCGCGAGGCGCTCAATCGAGTCGAGGAACTGGAGACGGAGAATAGCCACCTGACGAAGCGTCTGGACAAACTCAAGAATGCAAAATCAGCGCTCCTCAAGGAGCTGTGA
- Protein Sequence
- MRRPGDRRVEGFGRTNNKRHATAATEDKRHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTESVGRRGRLAALSPGALHSPRRSSEDSADDGFCLKDLRHELKEVEEKFRKAMILNAQLDNDKAALAYQLELLKDRLEELQEEHAQLQREHKEKCSAYERLRREHASLEREVTAARDAVRARDTAAQAAGFAFVEAGVEPCDEEMAPGEACGSVPALALVSRESEQLLNDAGEGTLDVRLQNILNQKLGLESEVRKLKLQLNEERAARHNGVAHAHDHEYENELETLRKCVSEAKARAARAEAEAALQGAAVARLEAQVSRLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041796;
- 90% Identity
- -
- 80% Identity
- -