Esab027504.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951905685.1
- Location
- OX645062.1:116337277-116350294[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.63 1.3e+04 -3.7 0.0 169 199 5 28 2 36 0.48 2 3 1.1e-116 2.2e-112 376.4 33.2 1 299 158 448 158 449 0.92 3 3 0.17 3.5e+03 -1.9 3.8 224 244 481 501 453 523 0.46
Sequence Information
- Coding Sequence
- ATGTCGGAAGTGTTGAAGCAATCCAACGGATTGATCTACGAGAGTGGCAACGCCGCCAATGAAGAGAATAACAATGTGAACGATATGAAATCCGCGGATTATGATGAAATTGGTGAAGAATTCGACTTTAGTGATAGTGAGTTGAGTGCTTTGGGAGACGGTGACGACAACGATGGTAATGGTGATAGTGCGAAAGACACGCGTGACGCTGTGGACAATGTGAATAACGATAGTGGACTGAAGCCGGCAAATTTGAGTCTCGAGCCGTCGAAGGATGTTGCTATAGATGCGTTCTGTCCAATTACGCCGCGTAAAATTGTCGACTGCGATGAATCGAAGAAGCTTAAGAGCAGAGATGGTGGTGACAGTGCTTCGAATGGATACGCCAGTGATGGAGCGGATGACGATGTCGATGAAGACGGAGGAGATGACGAGCTGATTGTTCAGTTTTTAGGACAGGCTAATCAAATCGCTGAAGCAAGACTGGCAGCCAGGCGACAGGCACGTGCCGAAGCGCGAGAAATTCGCATGCGCGAATTGGAGCGCCAACAAAAGGAACAAGAACAAAATGCCGATCGGGTATTCGATATGCAAACAGCGGCAGGCATTGATCCACTTGCTAGATCGCGTCTTACCGCATCGAGCGTTACCGGTGTGGTTAATTCCGTCCGTGCCGGTTCGATGTCTTCCCGTCGCAGCAGTGAAGATTCCCTGGAAGAGGAAGGTCGTAGCTTACGTGATATCAGGCATGAGCTCAAGGATGTTGAGGAGCGTTTTCGTAAGGCAATGATAGCCAATGCACAATTGGATAATGAACGAGCCTCGCAATCCTATCAAATTCAATTGCTCAAAGATAAACTTGAGGAAATGGAAGAGTCATACGCGCAATTGCAGCGTGAATTTAAAGAGAAAACACGCGAGTGTAACGCTCTCAAACGGAATCTGGACAAATTGAGCGAAGAGCTGAAACTTGTCCAGGGGCAATTGAATGAACGCGATACGCTTATAACCGAACAGGGTTTAGTAATTGTAGCCGTAGAGAATGAGGATGGCTCGGATGCCAAGCGAGCTCTAGTCACTATGGAGAATGCACAATTGTTAGGTTCTGTACAAGGCTCTCTCGATGTACGACTTAAGAAATTCAGtgaagaaaaacaacaacttCAGGCTGAAGTGCAACATTTACAGGAACAATTAGAGAATGTCAAGACACAGGGACGAGGACGCGGTATGTCCATGAACGGTCCAATGGGATCCGATGACGATTACGAAGCTCAAAGAGAAGCAAACAAAATCATCTCAGACTACAAGTATAAACTGCAAAAAGCCGAACAAGAGATTGCTAGTCTACAAGCCAGTTTAGCTCGATCAGAAACTCAAGTAATACGTTACAAGAGTACAGCGGAAGCGGCCGAAAAAGCTGAGGCAGATTTGAAAATCGAAAGGAGGAAGCTTCAACGAGAGAACCGTGAGGCAATGGAACGCCTAGAAGAGTTAGAAACATCCAATAATCATTTACTAAAACGACTGGATAAATTAAAGAATGCCAAGAGTGCATTGCTTAAAGAACTCTGA
- Protein Sequence
- MSEVLKQSNGLIYESGNAANEENNNVNDMKSADYDEIGEEFDFSDSELSALGDGDDNDGNGDSAKDTRDAVDNVNNDSGLKPANLSLEPSKDVAIDAFCPITPRKIVDCDESKKLKSRDGGDSASNGYASDGADDDVDEDGGDDELIVQFLGQANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRLTASSVTGVVNSVRAGSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLQREFKEKTRECNALKRNLDKLSEELKLVQGQLNERDTLITEQGLVIVAVENEDGSDAKRALVTMENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQHLQEQLENVKTQGRGRGMSMNGPMGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEADLKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315970;
- 90% Identity
- iTF_00991806;
- 80% Identity
- -