Eata005055.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- -
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010000027.1:1039467-1049427[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.011 0.97 10.4 0.6 3 23 219 240 218 240 0.90 2 23 0.027 2.4 9.2 0.6 1 22 601 622 601 622 0.95 3 23 4.1 3.6e+02 2.3 0.3 1 22 664 685 664 687 0.82 4 23 0.0062 0.55 11.2 0.4 3 21 698 716 696 717 0.94 5 23 0.27 23 6.0 0.0 3 23 726 747 724 747 0.89 6 23 0.011 0.95 10.4 0.2 3 23 767 788 765 788 0.96 7 23 0.011 0.97 10.4 2.7 1 23 794 817 794 817 0.95 8 23 0.077 6.8 7.7 0.0 1 23 842 865 842 865 0.90 9 23 0.011 1 10.3 3.4 1 23 870 892 870 892 0.97 10 23 0.08 7.1 7.7 0.1 1 23 898 921 898 921 0.95 11 23 0.00063 0.056 14.3 0.8 1 23 934 956 934 956 0.97 12 23 0.00011 0.0096 16.7 1.8 1 23 1006 1029 1006 1029 0.97 13 23 0.00043 0.038 14.8 1.3 1 23 1100 1123 1100 1123 0.96 14 23 0.0012 0.11 13.4 1.5 2 23 1149 1171 1148 1171 0.95 15 23 0.053 4.7 8.2 0.1 2 23 1177 1199 1176 1199 0.93 16 23 0.027 2.4 9.1 0.1 1 21 1243 1263 1243 1264 0.94 17 23 0.0012 0.1 13.5 0.2 1 23 1274 1296 1274 1296 0.93 18 23 5.4e-05 0.0048 17.7 0.3 2 23 1389 1411 1389 1411 0.93 19 23 1.1e-07 9.6e-06 26.1 1.1 3 23 1418 1438 1417 1438 0.98 20 23 0.18 16 6.6 0.1 1 23 1456 1478 1456 1478 0.96 21 23 0.12 10 7.2 0.0 1 23 1499 1521 1499 1521 0.97 22 23 0.0066 0.58 11.1 0.5 1 23 1527 1550 1527 1550 0.95 23 23 0.00019 0.017 15.9 0.7 1 23 1558 1581 1558 1581 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGGATTATGATAGTGTTTGTAGACTATGCTTAGCATCAGAATGTGATTTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCTTACCCTCGCTTCGAAAATCAAAGATTGTGTGTCCGTACAGATTGAAGAAAATGACAATCTGCCAAGGAATATTTGCAAAAAGTGCAATGACAATGTTAATAACTGGCAGATATTTAAGGCTGTTTGTGAAAGAACACAAAATAAATTACAAAATTTAAACAATAAGGACAGCAGCCTACTGGAAGAGGAGTTGAATGTTAAAAGTGAACCATTCAATGATGAGGCTTATGATGATGGAGTAGTTATTGATGGCTCATATCCAGAAAGTGAGAATGCAGATTCTTCAAGTAAATTACAACCAGAGGGTCCACCTATTTTGACTTCCTTAGGATTGACACCGAGGAGTGATAAGGGCATGGATAGTGATAAAGATGAATATGAACCAGATGAGACCGAGGAGCCTGCAGAAGATGATGAAGAGGAGGAAGAAATGGATAACAGAAAAGTTTATGCTGATATTCCCAACATGCCCGAGGTTTCTATAACGGTCATGCGGCCTACCGGCGAAACTTTGCATGCGCGACAAGGTATTCAACAATTAGCCTCCAAAGACTGCTTGGTGTGTGGCCGCAGCTATAGATACTCACACAATGCCAGAAGACACGAACTCGGTGCACATAATTTTGATAGATACACAAATAATATCTTGGCAAAAAAATCAAACCTTCAACCTAAGCTAAGGCCAAATCCATTTAACCCTAAAGCGAGATTGATGCCCAATCCCATTAGCCATAAAATTCAGTATATGGGAAAACCGTTGCAATCGAAAATGATTCCGCAAAAAATGATGGCCTGTTCAAAACCGATACCAATTAAAAATGCCAAACCCAACCAAAACAATTTGCCCTATCCACTCAGAATTAAAGCTTTAAAAGATTTACAAATAAAGAAAAAGGAACCCCAAATACTAAAAACACTTCTCACGTCAAAACCGGAAGTTCTGGTTTCTGAGCCCGAAATTCTTAACTCAGGTCCTGAAAGTCCAGAAACCTTGATTTCGGAACCAGAAATAGCGTCCTTTGCAGTTGAGACGATATTGTCTGAGCCGGATGGTTTCGTCAACCAACCAGATGACGATGACGATGGCGAAGGGCAAAATAATCGTGGCCATAATTATGATACAGTGGATATGGATTCGGAAAATGAAATTGAAATTGCTCGTCAACATGGTGAGAATTATCAAAATGAGCATAACCAGAATGATGATAATACGAAGGATGAGTTTGACGACAATGATGATTCAAATAAAAATGATAATGATAAACACGTCAAAAAAGAGAATATAGAGAATTATGGTGATGATGGAGATAGTAAACAAATCGACGAATTAATGGAAACTAATGACGATCAAGATCTAAATAATGAAGACGATTGTGAAGATGACGATGAAATGCCACCAATAGCACCAGTAGTGGAAATTAACGAAGAAGTAAATCATTCATTTAACTGCGAAGCCAATGAGGACGATTACCTCGATGATACAGGGGATCCAAATGATACTGTAGACGGTGAAATGAATGAGAAAATACTTGACCCTGATAAACTATACGTAACTAAGACCCAAAGAGATTTTATACAAAAATATCGAGATATTATACTGCAAATAAATACTATGACTTGTATATGTTGTAATAGGGAGCATCCGCGGAGGAAAGCAGTCATCCAACATCTACAAAAGAACGGACATAAAGTACCTAAGCATACCTGTTACAATTGTGTTGTAACTTTTAGTCATATCGGTGCATTGCTCAGTCACATGCGCTCTAACACTTGTACTGATTTATGGAAAATTATATATAATGAAAACGGCATCACAGACGATTTGGTCCTGGAAGACGAGCCAAAAGACAACAAGGTCCAATACAAAGATATATTCAATGCTAGATCTTACGCGTGTAAACTGTGTCCAGCCAAGTTCCAACTCAAGCAATTTATAATGAAACACGTACTGGATGTTCACGAGGATGGCCAGTCGAGGGTTTCCTTGGCCTGTGTACACTGCGGTTCGAGGTTTAAAGATAAGCCACTATGGAAGAAACATATACGTAATGGAGAATGCACTGTGTATATCGCCTGCGATCTGTGCACGGAAACGTTTATCACCATGCAGGAATTCAACGATCACGCATTGGCCGTACATGCGGGTAACTTCGATCCAGACAGTCAAAATAAATGCGTTGATGGCCGCCCAACAGATTGTCCCTTATGCGGCAAGAAGAACAGTAGCTATCCCAATTTGGTGAAGCACTTGAAAATCATTCACAACGAAGAGAAACCACACTATTGTCAACACTGTGATTCCAAATATAAGGAGGCTGCTGATCTTAACAAGCATATTTATATGGAACACTCTGACCGGACTCTAGGATTGCAAAACGAGCCGGATATGTCATTAGTTAAAGAGGAAGCTGAGGAATATCATTACTCGTGCACAGAATGTAACGCCATATTTGAAACAGTAGACGCGTGGACTGATCACCAGGTGGCTGAGCACAATCAGATTGCTCACCACTGTGACCAGTGCGAGAAGAAGTTCCTCAGGCCTTCGGAGCTTGCTGAGCACAAAAATACACACTTACGCGTTAAATTCTACCCATGTGGTATATGTGCAAATTCGTACAGCACAGCTCAGAAATTGGCCGAACATGTACAACAAACCCACCCCGGTTCGAACGCACTCGCAGGAGCAGATAATGAGTTCTTCTGCGATGTTTGCGTGAGAGGCTTTAAAAGCCGCCAAGCCTATTCCAACCACATGCGTATACACGCTAAAGTGCCTACAACTAATAGGAAACCAGGAATGGATCCTAAAAGTTTTGCACCACAGATTATTGGCAAGCCAATCCTACAATATCCGATGATACAGCCGGGTTTTGGCGCCTATAAAACAAGTTGTAATGTTCCTAATGCACCCTACTCTTGTGATATCTGCGGTAAAGGTTTTATGCATAAGAAAAATATTTGGAAGCACAAAAAGGTGCTTCATGCTGATATTGTGAACGATAGAAATGACAGCGAGGAGAATACTATGCATGCGTCCACTGAGGAGGATGAATATAACGTTGACGAGAATGGATCAATGTTGTCGACACCACAGTTCAATAGTTTCAACTTCACAAACTTGCCCATGATCACGAACCATACGGCTCCACAGCCTCAACACCCACCGACGCTCACACCTCAAGAAGCTAACCCCTTCTCTTGTGACTTGTGTTCCAAACGGTTCCCAGTCAAGACTAGTTTATGGAAGCACAAGCGCGCAAAACATGGCATCATTAACGCTAGCGCTATCGGTACGCCGGACATCCAACCTTCTGGAAGCGAAGGTGCGGGAGGTCGATCGAGCTGCACTATTTGCAAGATAACATTTGCGGATAAGAAATCTTACTATCGCCACAGAAAGAATGTTCACAAGTCCAACTCCCAAATGTGCAAAATTTGTGGCAAACCTCTAAATTCCACTTTAGAACTCTATGAGCATCTCAAAGCGGCTCATGCCAGAGAACTTCTGGGCTACAATTCCAACCAAGCGTCTAAGGCGCAAGCCCAAGAGTATGTGCCAGAGGAGCCCGAGTACGAGCCTGAACAGGATCCCAACGATCCCAGCAGCGAGTATCAGGCCCATTACCCTTGCGTGACTTGCGGCAAACAATTCATCGGTCTACTCGCGTTACAGAACCACCAATGTATCACGCAGTCACAATCCCAGGCGCAGACTTTCGACTGTGAGATCTGTCAGAAGAGTTACACGTCGATCGCCGCCCTGAAGAGTCACCGCGGATGGCACCTCAGGTCTCCGGACGGGAAAGCTGCGGCGAATAACTCGGGGCTGTGGATGCCGCACACCAAAGTTACTAACAAAGTGAGCAAGTTCGAAGTGCTCGACGCCGCCCAGTTTGCCAAAGTATCGCTCTCCACACAATCTACGTCGGCCGCTCTCGCGAAACGAAGATTACCACCGGAGGTCGAAGTGACGGTTGTTAATCCAAACAAGAAGATGCGTTCGGACGACTCGCTGGAACTGGACCAGCAGAACAGCACCTCGGTGAACGCCGACGACAGGTACTGCAATATATGCGACAAGGAATTTACCAAACGAGCCGCCTACCAGCGGCACATGGACGAGGTTCACCAACCCAACTCCGTCTTCTGTCCCGTTTGCGACAAGAGCTTCACGAGAAAGTCCACGCTGATCGTGCACATGAAGAAACATTACGAAGGCGAGGAAGGCACCTCGAGTGCGTCGATGCAAGACGAGGGCCTGCATACGTGCGACATATGTGAGATTCAGTTCGACAGCGAGGCGGACGCCGTGGCCCACCGAGACATGCACGTCGACGACTCTGGCGAGTCCGACGACGACGGCAGCGTCCCCATCCAACAGCCGGGTGAGTTCACGTGCGCGCAATGTGGCGATGGGGTCGCGACCCCGCGGGATCTGATCGCCCACCGCGCCATGCACTCTACCCCGACGAAGTTCTTCTGTAACATCTGCAAGGTCTACTTTGCGAGAGCCATCGACCTGTCGACTCACACCCGAGCCAGACACGCGGACAACGAAAAGGTTTTCTTCCCCTGCGCCATGTGCGATCGGTTTTATATGAATAAGAAGAGTTTGCAAAGGCACATCGAAATGTCTCACTGA
- Protein Sequence
- MSVDYDSVCRLCLASECDLLPIFPTTSSDDSEPLTLASKIKDCVSVQIEENDNLPRNICKKCNDNVNNWQIFKAVCERTQNKLQNLNNKDSSLLEEELNVKSEPFNDEAYDDGVVIDGSYPESENADSSSKLQPEGPPILTSLGLTPRSDKGMDSDKDEYEPDETEEPAEDDEEEEEMDNRKVYADIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNILAKKSNLQPKLRPNPFNPKARLMPNPISHKIQYMGKPLQSKMIPQKMMACSKPIPIKNAKPNQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFAVETILSEPDGFVNQPDDDDDGEGQNNRGHNYDTVDMDSENEIEIARQHGENYQNEHNQNDDNTKDEFDDNDDSNKNDNDKHVKKENIENYGDDGDSKQIDELMETNDDQDLNNEDDCEDDDEMPPIAPVVEINEEVNHSFNCEANEDDYLDDTGDPNDTVDGEMNEKILDPDKLYVTKTQRDFIQKYRDIILQINTMTCICCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVSLACVHCGSRFKDKPLWKKHIRNGECTVYIACDLCTETFITMQEFNDHALAVHAGNFDPDSQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKYKEAADLNKHIYMEHSDRTLGLQNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCGICANSYSTAQKLAEHVQQTHPGSNALAGADNEFFCDVCVRGFKSRQAYSNHMRIHAKVPTTNRKPGMDPKSFAPQIIGKPILQYPMIQPGFGAYKTSCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVNDRNDSEENTMHASTEEDEYNVDENGSMLSTPQFNSFNFTNLPMITNHTAPQPQHPPTLTPQEANPFSCDLCSKRFPVKTSLWKHKRAKHGIINASAIGTPDIQPSGSEGAGGRSSCTICKITFADKKSYYRHRKNVHKSNSQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQASKAQAQEYVPEEPEYEPEQDPNDPSSEYQAHYPCVTCGKQFIGLLALQNHQCITQSQSQAQTFDCEICQKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPHTKVTNKVSKFEVLDAAQFAKVSLSTQSTSAALAKRRLPPEVEVTVVNPNKKMRSDDSLELDQQNSTSVNADDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGEEGTSSASMQDEGLHTCDICEIQFDSEADAVAHRDMHVDDSGESDDDGSVPIQQPGEFTCAQCGDGVATPRDLIAHRAMHSTPTKFFCNICKVYFARAIDLSTHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289016; iTF_00262039; iTF_00925950;
- 90% Identity
- iTF_00262039;
- 80% Identity
- -