Ccec002586.2
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- -
- Assembly
- GCA_001625245.1
- Location
- LUGF01004508.1:59075-69561[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.014 1.6 10.4 0.6 3 23 217 238 216 238 0.90 2 23 0.034 4 9.1 0.6 1 22 599 620 599 620 0.95 3 23 5.2 6e+02 2.3 0.3 1 22 662 683 662 685 0.82 4 23 0.0078 0.91 11.2 0.4 3 21 696 714 694 715 0.94 5 23 0.34 39 6.0 0.0 3 23 724 745 722 745 0.89 6 23 0.014 1.6 10.4 0.2 3 23 765 786 763 786 0.96 7 23 0.0027 0.31 12.6 2.1 1 23 792 815 792 815 0.95 8 23 0.097 11 7.7 0.0 1 23 840 863 840 863 0.90 9 23 0.014 1.7 10.3 3.4 1 23 868 890 868 890 0.97 10 23 0.1 12 7.7 0.1 1 23 896 919 896 919 0.95 11 23 0.0008 0.093 14.3 0.8 1 23 931 953 931 953 0.97 12 23 0.00014 0.016 16.7 1.8 1 23 1004 1027 1004 1027 0.97 13 23 0.00055 0.064 14.8 1.3 1 23 1101 1124 1101 1124 0.96 14 23 0.0016 0.18 13.4 1.5 2 23 1150 1172 1149 1172 0.95 15 23 0.067 7.8 8.2 0.1 2 23 1178 1200 1177 1200 0.93 16 23 0.028 3.3 9.4 0.1 1 21 1245 1265 1245 1266 0.94 17 23 0.00095 0.11 14.0 0.6 1 23 1276 1298 1276 1298 0.93 18 23 6.8e-05 0.0079 17.6 0.3 2 23 1391 1413 1391 1413 0.93 19 23 1.4e-07 1.6e-05 26.1 1.1 3 23 1420 1440 1419 1440 0.98 20 23 0.13 15 7.3 0.1 1 23 1458 1480 1458 1480 0.96 21 23 0.15 17 7.2 0.0 1 23 1501 1523 1501 1523 0.97 22 23 0.0083 0.96 11.1 0.5 1 23 1529 1552 1529 1552 0.95 23 23 0.00024 0.028 15.9 0.7 1 23 1560 1583 1560 1583 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGGATTATGATCGTGTTTGTAGACTATGCTTAGCATCAGAATGTGATTTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCCCTTGTCCTCGCTTCGAAAATCAAAGATTGTGTGTCCGTACAGattGAAGAAAATGACAATCTGCCAAGgaatatttgcaaaaaatgCAATGACAATGTTAATAACTGGCAGATATTTAAGGGTGTTTGTGaaagaacacaaaataaattacaaaatttaaacaacaaGGACAGCAGCCTACTGGAAGAGttaaaTGTTAAAAGTGAACCATTTAATGATGAAGTTTATGATGGAGTAGTCATTGATGGCTCATATCCAGAAAGTGAGACTGCTGATTCTTCGAGTAAATTACAACCAGAAGGTCCACCTATTTTGACTTCCTTGGGATTGACACCGAGGAGTGATAAGggcATGGATAGTGATAAAGATGAATATGAAGCCGATGAGGCCGAGGAGCCAGCAGAAGATGatgaagaggaagaagaaaTTAATAACAGTAAAGTTTATGCCGATATACCCAACATGCCTGAGGTCTCCATAACGGTCATGCGGCCCACTGGCGAAACTCTACACGCGCGGCAAGGTATCCAACAACTGGCCTCCAAAGACTGCTTAGTCTGTGGGCGTAGCTACAGATACTCACATAATGCCAGGAGACACGAACTCGGTGCGCACAACTTCGACAGATACACAAACAATGTTTTAGCGAAGAAATCCAATTTTCAACCCAAGTTGAGGCCAAACCCGTTTAATCCAAAGGCAAGGTTGATGCCCAATCCCATTAGCCATAAAATGCAATATATGGGGAAACCGTTGCAGTCGAAAATAATACCGCAAAAAATGATCGCCTGTTCAAAACCGATACCAATCAAAAATGCCAAACAACCCCAAATCAATTTACCCTATCCACTTAGAATTAAAGCTTTAAAggatttacaaataaagaaaaaagaacctCAAATATTAAAGACTCTTCTTACTTCAAAACCAGAAGTTCTAGTTTCTGAACCTGAAATTCTGAACTCCGGCCCTGAAAGTCCAGAAACACTTATTTCGGAACCAGAAATAGCGTCATTTGCAGTAGAGGCAATCCTGTCCGAGCCGGATGGTTTCGTTAACCAAcaggatgatgatgacgatgggGAAGAGCAAAGCAATCGTGGCCATAATTATGATACAGTTGATATGGATTCggaaaatgaaattgaaatagcTCGTCAACGACATGATGAGAACTATCAGAATGATAACCAGAATGATGATAACACAAaggatgattatgatgataatgatgattctaataaaaatgatgatgataaagacgTCAAAAAAGAGAGTACCGATAATGAAGTTGATGATGGAGATAGTAAACAAAATGATGAATTAATGGAAACCGGGGAAGACCAAGACatgaataatgatgatgattgtgaaGATGACGATGAAATGCCACCGATAGCACCAGTCGTTGAAATCAATGAAGAAGTGAACAACTCATTTAACAGCGAAGTCAATGACGATGATTATCTCGATGATACAGTGGATCCAAGTGATACTGTGGACGGTGACATGCATGACAAAATACTAGACCCTGATAAAATTTACGTAACAAAGACCCAAAGAGATTTCATAACTAAATATCGTGATATTATACTGCAAATTAATACTATGACTTGCCTATGTTGTAATAGGGAGCATCCGCGAAGAAAAGCAGTCATCCAACATCTACAAAAGAATGGTCACAAAGTACCCAAGCACACTTGTTATAATTGCGTCGTAACTTTTAGTCACATCGGCGCGTTGCTTAGTCACATGCGATCCAACACATGCACAGATTTAtggaaaattatatacaatgagAACGGCATAACCGACGATTTGGTTTTAGAAGACGAGCCAAAAGACAACAAGATCCAGTACAAAGATATTTTCAATGCAAGGTCCTATGCGTGTAAACTATGTCCGGCGAAATTCCAGCTCAAGCAATTTATAATGAAACACGTGCTGGATGTGCATGAGGATGGGCAATCTAGGGTGTCTTTGGCCTGTGTACACTGTGGTTCGAGGTTCAAAGACAAACCGCTGTGGAAGAAACACATACGTAACGGAGAATGCACTGTGTACATCGCATGCGATCTGTGCACCGAAACATTTATCACCATGCAGGAATTCAACGATCATGCTTTGGCTGTGCATGCGGGCAACTTCGATCCCGACAATCAAAACAAATGCGTTGATGGCCGCCCAACAGACTGCCCCTTATGCGGCAAGAAGAACAGTAGCTATCCTAATTTGGTGAAGCATTTGAAGATCATTCACAATGAAGAGAAGCCACATTACTGCCAACACTGTGAGGCCAAATTTAAGGAAGCCGCTGATCTTAACAAGCATATTTACATGGAGCACTCTGACCGGAGTCTACGACAGCAAAACGAGCCTGATATGTCATTAGTTAAAGAAGAGGCCGAAGAATATCATTACTCGTGTACAGAATGCAATGCCATATTTGAAACGGTGGACGCGTGGACCGATCACCAAGTGGCAGAGCACAATCAGATAGCTCATCACTGTGATCAGTGCGAGAAAAAGTTCCTAAGGCCTTCTGAGCTTGCTGAGCACAAAAATACACACTTGCGCGTTAAATTCTATCCGTGTGGTATATGTGCAAATTCCTACAGCACAGCTCAGAAATTGGCCGAACATGTACAACAGACTCATCCCGGATCGAACTCCCTCGGAGCAGAAAACGAATTCTTCTGCGATGTGTGCGTGAGAGGATTTAAGAGCCGCCAAGCCTATTCCAACCACATGCGTATACATGCTAAAGTACCTACGACTAATAGGAAACCCGGAGCAATGGATCCTAAGAGTTTTGCTCCACAGATTATTGGCAAACCAATCCTACAATATCCAATGATACAACCAGGTTTTGGCGCCTACAAAACAAGTTGCAATGTTCCTAATGCACCGTACTCTTGTGATATTTGCGGTAAAGGTTTTATGCATAAGAAGAATATTTGGAAGCACAAAAAGGTGCTTCATGCTGATATCGTGAACGATAGGAATGATAGCGAGGAGAATACAATGCATGCGTCCACGGAGGAGGATGAATATAACGTAGACGAAAATGGATCCATGTTGTCGACACCACAGTTCAACAGCTTTAACTTCACAAACTTACCCATCATCACAAACCACAACACACCACAGCCTCAGCACCCCCATGCATCACAGTCGCTGACACCTCAAGAGGCCAACCCCTTCTCGTGTGACCTGTGTTCCAAACGGTTCCCAGTCAAGACCAGTTTATGGAAGCACAAGCGCGCAAAACATGGCATCATTAACGCTAGCGCCATCGGTACACCGGAGATTCAACCTTCTGGAAGCGAAGGCGCGGGCGGAAGATCGAGCTGCACTATTTGCAAGATAACATTCGCCGATAAGAAATCTTACTATCGCCACAGGAAGAATGTCCACAAGTCCAACTCGCAAATGTGCAAAATCTGTGGCAAACCTCTGAATTCCACGCTAGAACTTTACGAGCATCTCAAAGCGGCTCATGCCAGAGAACTCCTGGGCTACAATTCTAACCAGGCTGCGTCTAAGACGCAGTCTCAAGAATATGTGAAAGAGGAGCCCGAATACGAGCAAGAACAGGATCCAAACGATCCCACCAACGAGTATCAGGCTCATTACCCCTGTGTGACTTGTGGGAAACAATTCGTCGGTCTTCTCGCGCTGCAGAATCACCAATGCATCACTCAGTCCCAATCCCAAGCGCAGACATTTGACTGTGAGATCTGTCACAAGAGTTACACGTCGATCGCCGCCCTGAAGAGTCACCGGGGTTGGCATCTCAGATCCCCGGACGGAAAAGCCGCGGCGAATAACTCTGGCCTTTGGATGCCTCACACCAAGGTGACCAACAAAGTGAGTAAGTTCGAGGTTCTCGACGCAGCGCAGTTCGCTAAGGTATCGCATTCCACACAATCGACGTCGGCCGCTCTAGCGAAACGACGATTACCTCCAGAGGTGGAAGTGACGGTCGTTAATCCAAACAAGAAGATGCGATCAGACGACTCGCTGGAGTTTGACCAGCAAAACAGCACTTCAGGTAATGCCGATGACAGGTACTGCAAcatttgcgacaaggagttcACAAAACGAGCCGCCTACCAGCGACATATGGACGAGGTTCACCAGCCCAACTCTGTCTTCTGCCCGGTGTGTGACAAGAGTTTCACGAGGAAGTCTACATTGATCGTGCACATGAAGAAGCATTACGAAGGCGAGGAAGGCACTTCTAGTACGTCGATGCAGGACGAGGGTCTCCACACGTGCGATATTTGCGAGATTCAGTTCGACAGCGAAGCTGACGCCATTGCCCACCGAGACATGCATGTGGACGACTCCGGGGAGTCGGACGACGATGGCAGCGTCCCCATCCAACAGCCGGGAGAGTTCACCTGCGCCCAATGTGGTGACGGGGTCGCGACCCCGCGGGATCTGATCGCCCACCGCGCCATGCACTCTACTCCTACCAAATTCTTCTGCAATATTTGCAAGGTCTACTTCGCGCGAGCCATCGATCTATCTACTCACACCCGAGCCAGACACGCGGACAACGAAAAGGTTTTCTTCCCCTGCGCCATGTGTGACCGATTTTACATGAATAAGAAAAGTTTGCAGAGGCACATCGAAATGTCTCACTGA
- Protein Sequence
- MSVDYDRVCRLCLASECDLLPIFPTTSSDDSEPLVLASKIKDCVSVQIEENDNLPRNICKKCNDNVNNWQIFKGVCERTQNKLQNLNNKDSSLLEELNVKSEPFNDEVYDGVVIDGSYPESETADSSSKLQPEGPPILTSLGLTPRSDKGMDSDKDEYEADEAEEPAEDDEEEEEINNSKVYADIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNVLAKKSNFQPKLRPNPFNPKARLMPNPISHKMQYMGKPLQSKIIPQKMIACSKPIPIKNAKQPQINLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFAVEAILSEPDGFVNQQDDDDDGEEQSNRGHNYDTVDMDSENEIEIARQRHDENYQNDNQNDDNTKDDYDDNDDSNKNDDDKDVKKESTDNEVDDGDSKQNDELMETGEDQDMNNDDDCEDDDEMPPIAPVVEINEEVNNSFNSEVNDDDYLDDTVDPSDTVDGDMHDKILDPDKIYVTKTQRDFITKYRDIILQINTMTCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDNKIQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVSLACVHCGSRFKDKPLWKKHIRNGECTVYIACDLCTETFITMQEFNDHALAVHAGNFDPDNQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCEAKFKEAADLNKHIYMEHSDRSLRQQNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCGICANSYSTAQKLAEHVQQTHPGSNSLGAENEFFCDVCVRGFKSRQAYSNHMRIHAKVPTTNRKPGAMDPKSFAPQIIGKPILQYPMIQPGFGAYKTSCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVNDRNDSEENTMHASTEEDEYNVDENGSMLSTPQFNSFNFTNLPIITNHNTPQPQHPHASQSLTPQEANPFSCDLCSKRFPVKTSLWKHKRAKHGIINASAIGTPEIQPSGSEGAGGRSSCTICKITFADKKSYYRHRKNVHKSNSQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQAASKTQSQEYVKEEPEYEQEQDPNDPTNEYQAHYPCVTCGKQFVGLLALQNHQCITQSQSQAQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPHTKVTNKVSKFEVLDAAQFAKVSHSTQSTSAALAKRRLPPEVEVTVVNPNKKMRSDDSLEFDQQNSTSGNADDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGEEGTSSTSMQDEGLHTCDICEIQFDSEADAIAHRDMHVDDSGESDDDGSVPIQQPGEFTCAQCGDGVATPRDLIAHRAMHSTPTKFFCNICKVYFARAIDLSTHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00688027;
- 90% Identity
- iTF_00688027;
- 80% Identity
- -