Basic Information

Gene Symbol
TFIP11
Assembly
GCA_002201625.1
Location
NIJG01000271.1:103226-108006[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2e-101 3.9e-97 324.9 15.6 1 275 392 659 392 659 0.99
2 2 0.002 15 4.8 0.2 244 272 673 701 664 704 0.88

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTAGAAAGTTTTGAAATTACGGATTACGACCTTGAGAATGAATTCAACATTAATCGCCCAAGGCGAAAATTAACAAAAAAGCAACAAATGCTTGGTATTTGGGCAGATGATAGCGATGAAGATGAATTATCTGCTAGACCATCATTTAAAACATTTGACAAAGGACCAAAGAATTATACGACTCCTGTAAACTTTGTAGCGGGAGGTATTCAACATGCTGGAAAACCAAAAGACGAAGCAGATGACAAAGATGATGATGAAAGTGATAACGACAATAAGTTGCAAAGGGAATTTCCAAATAGTTCGAGTTCTGAAGATGAAAGACCAAGTTCTTTGCATCAACGTGCATCATTTTCGTTAAATACAGATGGAGATATTGCAGGTTTACGTAAAAAGAAACAAAAAGTAAATCCTTTATTAATGCAAAGCGGAATGGGTAGTTGGGAAGTCTATACAAAAGGTATTGGAGCTAAGTTGCTACTACAGATGGGCTTTGAACCTGGTAAAGGATTAGGTAAACAATTGCAAGGTATAAGTGCACCAGTAGAAGCACATCTGAGAAAAGGCAGGGGAGCAATTGGTGCTTATGGCCCAGAAAAAGCTCCAAAAGTTCCAGAAAAGAAAAAAGATGAAGAAACAGAAGAGGGCAAAGAATCTAAAGCTAAGTTATCGCAATGGAGGAAAGGAGATGGAAGTATTACTAAGAAAAAGGTTAATTATGTATACAGGAGTGTAGATCAAGTTTTGGAAGATGGAAAATTAAAACCTAATAAAAAAGTAAGAATATCCAATGAGATGAGTAGGGTTAAAGTCATAGATATGACTGGACCAGAACAGAGAATTCTTAGTGGATACCACGCGATAGCTGGAGGTCAACAACGTCCTGATGAAAATATCGTTGTTACTGATAAAAAGGCTAAAGTTAACTTTGAACTGCCAGAGCTTCAACATAATTTAAATATACTTGTGGATATGTGTGAGCAAAATATTATACAAAATGACAGAAGGACACGACATTTGAGTGACAGGATGGTTGCATTGGAAGCAGAGAAGAAAAATTTATCCAAAGTTATAGATCAACATAGTCAGTTAATAGACACTTTAGAAAATGTTCTTGCAATTGTAGATAGATTGATGGATGAAACAAATCAATTAACATTACAAGAAACTGCAGATGCTTTTAAAGATTTACAAGATAAATATTACGAGGAATATAAAATGTACGAACTTGGTGAATTAGCTAGCAGTTTTGTTGGCCTAAAAATAAAAGATTGTCTAATTAATTGGAATCCATTAATGCAACCAAAACAACCTATCAAATTGTTTGAACAATGGAAAGGTATATTAGAAAGTGGTATCACTACTCTTCAGACAAGAACCATGCATCCATATGATCATCTTGTTTGGAATTCATGGATGCCATCAATTAGAGGAGCCATACAACAGTGGACATGTAGGCAACCAGAACCACTAATTGAATTAATAGAATATTGGATGCCATTACTTCCAAGTTGGATATTAGAAAATATTTTAGATATGCTAGTTCTTCCTAAACTTACATTGGAAGTAGAAGAGTGGAATCCTCTTACAGATACAGTACCTATTCATACATGGATTCATCCTTGGTTACCACTTTTAAGAAATCGTTTGGATACCTTAATATATCCAATAATACGTCGCAAACTAGGATCTGCATTAGGTGGGTGGCACCCATCTGACAGATCTGCTAGACTAATGTTACAACCATGGTCTAACGTTTTCGCAAAAGGGGACATGGAAGCGTTTTTAGTAAAAAATATCATTCCAAAACTGCAAATAGCACTTTCAGAATTTGTTATAAACCCGCACCAACAACATTTGGATCAATGGAATTGGGTATATGAATGGAAGGAATTGATTCCTGCTCATATAATGGCAGGGTTACTGGATAAATTCTTTTTCCCTAAATGGTTACAAGTTTTGGCTCTTTGGTTAAATCATTCCCCTAACTATGATCAAGTTACAAATTGGTACATGGGATGGAAAAGTATGTTGAGTGAAAAACTATTGGCTGAACCGTTAGTAAAAGAACACTTCAAGAAAGCGTTAGAGATGATGAATAGAGCAGTTTCCGTGCCGCAAAGTCATCAACCAGGTGCGATGGAACAAGTTTCGTATTTAACGAGTTTAGAAAGGACTCAACCTACTATGTCACAGATGCCTCCAACTGCGCAACCAAGAATGGAGAGACTTGCAGAAGCAGTTAGAACAGCATCGCAGATACCTCAAGGTTTTAAAGACCTTGTTCAAAAGAAATGCGAGGAGAGGGGTATTTTGTTTATGCCAATACCAAATCGGTATAGGGAAGCAAAACAAGTTTACAAAGTGGGCAATGTCCAAGCTTATATAGACGGCAACGTTTTATTTGTTTGTCATAATGGAATGAATTGGATGCCAACCCACTTAAATGCTTTGTTAGATATGTCGGAACTCTAG
Protein Sequence
MSEDEVESFEITDYDLENEFNINRPRRKLTKKQQMLGIWADDSDEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQHAGKPKDEADDKDDDESDNDNKLQREFPNSSSSEDERPSSLHQRASFSLNTDGDIAGLRKKKQKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKAPKVPEKKKDEETEEGKESKAKLSQWRKGDGSITKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDENIVVTDKKAKVNFELPELQHNLNILVDMCEQNIIQNDRRTRHLSDRMVALEAEKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGLKIKDCLINWNPLMQPKQPIKLFEQWKGILESGITTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPLIELIEYWMPLLPSWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSNVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPAHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKSMLSEKLLAEPLVKEHFKKALEMMNRAVSVPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGMNWMPTHLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00118005;
80% Identity
-