Edil007087.1
Basic Information
- Insect
- Euglossa dilemma
- Gene Symbol
- lola
- Assembly
- GCA_002201625.1
- Location
- NIJG01000057.1:189419-191649[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-06 0.005 16.3 0.0 6 38 204 236 199 242 0.71 2 4 6.6e-11 1.1e-07 31.2 0.0 5 39 253 286 250 293 0.85 3 4 0.085 1.4e+02 2.0 0.0 21 34 320 333 306 338 0.80 4 4 8.7e-12 1.5e-08 34.0 0.1 4 39 364 399 361 404 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAAATTGTTAACCAACATGAGGTCAATCAAAGTTATTGGTTTAAATGGAATGATTATCAAAACCATCTTTCCGATGTAGTTAGACAACTCCTAGAGGAAGATTGTATGGTGGATGTTACCCTAGCTGCTGCTGGGGAACGTATTCATGCTCATCGTATAGTTCTTTGTGCTTGTAGCACTTTATTTCGAGAAATATTGAGTCAAGTTAATGAAGACCATTCAACAATAATATTAAGTGACATATCTGCTCAAGACATAAAATCTATCATAGAATTTACTTACCATGGAGAAGTAAGAGTTCCAGTTGAAAATATTAGTAGTTTATTAGATGCAGCACGTTCATTAAAAATCTGTGGTCTTATCGAAATTGATGGACTTGAAGAAACTGATTCTGTTATAAGTAACAAAGATTTTAATGATAATAATGAAGAACCAATGACTGTAATTAGTGAGACAGAGGAAAATGTTATTACTGCATTACAACATAATTATGAAGATTTAGAAGATCAACAAAAAGATGAGGTTATTGAAAATTCTCCCTTAAATAAAAAAAAGAAACGCAGACGTGATACTACAAAAAGAGATTATAGTGATGATATGTTAGCATCAGCAATTAGTGATTTAAAAGCAGGCCAAACATTAATAGAAGCTTCTACTAAACATAACATACCACGTTCAACCTTGTATATGCGTGCTAAAGCATTAGGTATACATTTAAATGCATCAAGAAATGAATATCCAGCAGAATGTATGAAAGCTGCTATAAATGCGGTAATTGCTGGATCAAGTTTGCAGCATGCATCAGAAATGTTTAGTATACCAAAGACTGTATTATGGAGAAGAATACAAAAAGAAGGATATCAGATATTACGTTCAGAAATGAAAAGATCTTATGGGTCTGATAAACGGGAAGCTGCTGTTAAAGCTTTAGAAAGAGGAGAGAATTTAACAAAAGTTGCACTTGAATTCAAAATACCGAAGACTACTCTATTTAGAGATAAAGCTCGATTAGTAGATGAAGGGAAATTACCATTGTCATTTTGGAAGAAACGTAAAACAGAAAATGAAGAGTTAAAAAAGTCGCGTTTGGAGGAAGCTGTTGCTGCTTGTAAAGGAGGAAAAATGTCGCAAGCAGCGGCATCGATGACTTATCATATTCCAAAGACAACAATATGGAGACGTCTTCAACAAGATGGTAAAAAATCAGAGCGCTTATTAAGTTCAAGAAAACAAAGAATAATGGATTCTAAACATAGTACAGAAACAAAGGTACAAGAAGGATCAGATTTTACTTATTGCGAGGTTTCCTCCGAAATTCCTATAACTTATATAGATGAAAATAGTATACCTGAAGATTCTGTGATAATATTAACAGCAGAAGATATGGATGGACTTAATTTAGAAGAAGGGCGACAAATTATTGTTAACTCAGAATCAGGACAAGAATATGTTCCTTGTGCTATAAGTATTGAAGAAAACTCAAATTATTCACAAACAGAAAGT
- Protein Sequence
- MSEIVNQHEVNQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHSTIILSDISAQDIKSIIEFTYHGEVRVPVENISSLLDAARSLKICGLIEIDGLEETDSVISNKDFNDNNEEPMTVISETEENVITALQHNYEDLEDQQKDEVIENSPLNKKKKRRRDTTKRDYSDDMLASAISDLKAGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIAGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERLLSSRKQRIMDSKHSTETKVQEGSDFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDGLNLEEGRQIIVNSESGQEYVPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00684872;