Emex002255.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eufriesea mexicana
Gene Symbol
ZFY
Assembly
GCA_001483705.1
Location
NW:42391-71290[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 5.6 3e+02 1.4 4.2 1 23 500 524 500 524 0.92
2 13 0.0025 0.13 11.9 0.2 2 22 582 602 581 605 0.89
3 13 0.011 0.57 9.9 0.7 2 23 620 642 619 642 0.96
4 13 0.14 7.8 6.4 0.7 1 23 660 684 660 684 0.92
5 13 6.4 3.4e+02 1.2 2.2 2 23 704 726 704 726 0.92
6 13 0.01 0.55 10.0 1.8 1 21 731 751 731 756 0.95
7 13 4e-05 0.0022 17.5 0.4 1 23 817 838 817 838 0.99
8 13 0.00066 0.036 13.7 0.1 1 21 844 864 844 865 0.95
9 13 5.3e-05 0.0029 17.2 2.1 1 23 884 906 884 906 0.97
10 13 0.0027 0.15 11.8 0.0 1 23 911 936 911 936 0.94
11 13 0.00016 0.0086 15.7 2.6 1 23 945 967 945 967 0.98
12 13 0.072 3.9 7.3 0.8 3 23 981 1003 980 1003 0.92
13 13 0.0034 0.18 11.5 1.7 1 21 1009 1029 1009 1034 0.94

Sequence Information

Coding Sequence
ATGGAAAGTtacgaggacgacgacgacaCCCACTTTTGCATCAAGTGCCATCTGACGATACACGGTCTGGAGAATTACGTGCGACATCGTCAATCCGGATGTCGACCACCGGACGACAAAAACGTAGCCGTGCGGGTATCACCGACGACGCCCGCTTCACCGACCACCGTCACCTATCCGGAAATACTGAACGCGGACGCATTCTTCAGTTCGTTGGAGCTGCAGAGCAGTTCCAAGTCGAATCCTCGAAAAACGACCGCTTTGCTGGAGGAGAGTAAGAAGTTtaaaaaggaggagaaaaagaaaaagagtcAGAAAGCGCAGGTGGACGCGGAAGAATCGACGGTAAAGGAGAAGCTTCACAATATGCTGCCAGGAGTCTCGGAACTCGACGATCCAACCGAGCATCTCTGCATGCCATCCCTCGTTGGCTTTCCCGATATCGTTTCCTCCGCGGCCAGTAAGCCTACGGTTACAAGCAGTCGGAACAAATTAAGCCAATCGATGACCAATGTCGCGACGAACATCGAGAGTAGCGGATTCTCGGTAAAACACGAGCCGGAAAATTCTTTGGAAAGTTTGATGACCTCTCACGTGGAATCCAAACAGACGGATCGAAAGAGGCAAGAGGAGTCGCAGAGGATCGAGCAAGTTCATCAAACGTGGCTCGAGGATACGATCCTGGCCGAATTAGTAGCGAACAACGAGAACAAGGATTTAACCAGATACGATTTCGAATATCAACAGGACGAGGATTCAGAGGACGATATATTGGAAGAAGATTTGGGGGAGGATGACTCTTACTCCGAGTCGGACGACGGGGAGGATAGGGAACGTCCACCGCGCGGTCACACCGGTGGCAAATGGAAGCCAGAATTGGACGATCTTCCTCAAAATATGTCTCAACTTCAGGACGACGATGTGGACCCGGAAGACGAACATCAAGAACATCCGCCGCCGACTTACACCGGGGGCAAGTGGCGACCTTCGGATACCTCGCAGAAGGCGGAGGAGTACGAGACCAAGAGCACCGATGGACAGCCACCGCCAGGACACACGCGAGGGAAATGGGTACCGGGCGCGCAAACGGATATCGAATCAGGATATTGGTGCAATCCTTGCGGCAGGAAACTTGCCTCTCGATTGGTCTACAACAGGCATCTTCTCTCTGATTTGCACGCTAGAAGGAGCATCCGAGAAATCGATGGCGTTCTTTGCCTACCGCGTACCGCGAGCTTGCACGTTGCGAGAAAGTCATCGCCTCGTAATCAAAGAACCAGACAAGCATCGGAAACGAAGGGGGCGAAGAAGAGTTCGCGAAAGCGGGAAAAGGAAATAGTTTGCTGCGAGATGTGTCATGCACGAGTGAGAAGGGCACAAATGGGCAAGCATTTGCTCTCTCATTATCACTGCCGCGTGGCCGGTGTAAATCCTCGCGGGCCACGAGCGCGTCGCTTTTTACTGGAAAATATGGCGAATGTGGTTCGGCAGTGTCCTTTTCAGTGTTTCTCTTGTCGCTTTTATTGCAACACGGAGGAAACCTTTCTGCGTCATTGGCGATCCGATCTTCACGCGAAAACGCTCGAACAGATCGGCGGTGGCAGCTACAGATGTACCCCTTGCGACTATTGGTGCGAAGACGGGGAAACTATGCATTCTCACCTGCTCAGCTCGAGCCATCGCGACGTTGTTTCCGTGATGAATGGTTCGGTACCGATCATGGTCGGTCGTCAACGAGCTCTGCCTTGTGGCAGCTGTGATCGTCGATTCCGATATAATCTAGAGCTTCGCTTGCACATCAGGGAAACTGGTCACGAAGAGAGTTTGACCGCGACGGACGAGTATCAGCAGCGAATCAAATGCAATTCGTGCCCGCAAATAGTAAGATCGTTGGTGGCGCTTCAACGTCACCAGTTGTCCTGTCACAGCGTAAAGATCGAGAAGGACGAGACGAACGACTCGCCTCCGCCCGCTCCTTACTTTTGTTCCTTTTGCTCTATGAACTTTGCGACCGCTCGAGAAGCGGTTTTGCATCGCAGAACGTCCAGTCACAAAGAGACGGTAAAGGCACGGAAAAGCAAGGAGAACTCGTCGATAACCACGACTCGAGAGTGTCCCCATTGCGAGGAGAAGCAAGCGAATTTGTCGGAGCACAAGAAACATCTTCTCACCGATCATCCGGAGCTTTGTTACAGATGTCCGAAATGCGGCACGTTGTTTGCCCTTTCGCAAGACGTGACGAGACACACGAGAGAGAACAAGTGTCACGAGGATGACGAGTTAAACGCGACGAAAAGGACGGACGTGAAAGACGAATGGAAATGCGGGAATTGCAGCTTCTCGAGCAACTCCCAGGCCGAGTTTATCTTTCACGAGGCTCTTCACGCGGGGGTCGTGGCGCGAAGCGATAACGAGGACGCGAGTCGCGGCAAATCGTCGTTGGCCAAGTATCGTTGTCCCGTTTGCAAGAAGGCCTTCGCGAAAGTCTCGTTGCGGAATCACATAAGAAGTCACACCGGAGAACGGCCGTTTCCCTGTGCCAAGTGTCTCGTGCCCTTCTCGAGAAGATCGGACCTGAACGCCCATCAGAAGGAGTGCACGGGATCGACGTCGTCCGGCTGGTCAGACGAATCCGGACGGAAACGCAGCTTTGCCTGTTCCGAGTGCAACAACGCTTTCTACACCAAGCACGCTCTGCGGCAACACATGTTGCGACACGCGGGAAAAAAATACAAGTGCGGACTTCCGGGCTGTCCGACGGTCCTTCGAACAGCCTCCGAATTGAGATCGCACAGAAGCTTGGTGCACGACTGCACGCCGTCTAATAGACGATACAAGTGCTCGGATTGCTCGTACGCGGCAAAGACCAAGACGCAGCTGCGACGGCACCGCAGTCGACACGACGGACCAGAGAACGCGACGAAATCGCAAGTTCGCGCGTGTCCTTACAACGGCTGCGCTTTCAAGACGAAGCTCGCCTCTCATTTGCAACGGCACGTGCGTCTTCACACGGGCACGAAACCTTACAAGTGTCGCCATTGTAGTTACGCGAGCAACAACTTGGAGAATCTGCGGAAACACGTGCTGTCCACGAACCTGCATCCGGGCAAGACGATCTACGAGTGCGACGTTTGCCAGGGTGAGGAGGGAACGCAACCGTTTCGGACCAACTTCGCCAAAGAGCTACGCGCGCATCTGCTGGAGATGCACGGATCGGCGTTTCCGACGCCTAGCCACGCCAACGATTACGTCTTGGGGATTTTCGAGGTTCATCGAAACGCTACGACTTTCGTCGCCGAGTCGAGTTAA
Protein Sequence
MESYEDDDDTHFCIKCHLTIHGLENYVRHRQSGCRPPDDKNVAVRVSPTTPASPTTVTYPEILNADAFFSSLELQSSSKSNPRKTTALLEESKKFKKEEKKKKSQKAQVDAEESTVKEKLHNMLPGVSELDDPTEHLCMPSLVGFPDIVSSAASKPTVTSSRNKLSQSMTNVATNIESSGFSVKHEPENSLESLMTSHVESKQTDRKRQEESQRIEQVHQTWLEDTILAELVANNENKDLTRYDFEYQQDEDSEDDILEEDLGEDDSYSESDDGEDRERPPRGHTGGKWKPELDDLPQNMSQLQDDDVDPEDEHQEHPPPTYTGGKWRPSDTSQKAEEYETKSTDGQPPPGHTRGKWVPGAQTDIESGYWCNPCGRKLASRLVYNRHLLSDLHARRSIREIDGVLCLPRTASLHVARKSSPRNQRTRQASETKGAKKSSRKREKEIVCCEMCHARVRRAQMGKHLLSHYHCRVAGVNPRGPRARRFLLENMANVVRQCPFQCFSCRFYCNTEETFLRHWRSDLHAKTLEQIGGGSYRCTPCDYWCEDGETMHSHLLSSSHRDVVSVMNGSVPIMVGRQRALPCGSCDRRFRYNLELRLHIRETGHEESLTATDEYQQRIKCNSCPQIVRSLVALQRHQLSCHSVKIEKDETNDSPPPAPYFCSFCSMNFATAREAVLHRRTSSHKETVKARKSKENSSITTTRECPHCEEKQANLSEHKKHLLTDHPELCYRCPKCGTLFALSQDVTRHTRENKCHEDDELNATKRTDVKDEWKCGNCSFSSNSQAEFIFHEALHAGVVARSDNEDASRGKSSLAKYRCPVCKKAFAKVSLRNHIRSHTGERPFPCAKCLVPFSRRSDLNAHQKECTGSTSSGWSDESGRKRSFACSECNNAFYTKHALRQHMLRHAGKKYKCGLPGCPTVLRTASELRSHRSLVHDCTPSNRRYKCSDCSYAAKTKTQLRRHRSRHDGPENATKSQVRACPYNGCAFKTKLASHLQRHVRLHTGTKPYKCRHCSYASNNLENLRKHVLSTNLHPGKTIYECDVCQGEEGTQPFRTNFAKELRAHLLEMHGSAFPTPSHANDYVLGIFEVHRNATTFVAESS