Btur004357.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus turneri
Gene Symbol
ZFY
Assembly
GCA_014825825.1
Location
CM026112.1:8495746-8524549[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 6.4 5.7e+02 1.4 4.2 1 23 499 523 499 523 0.92
2 12 0.001 0.09 13.4 0.2 2 22 580 600 579 603 0.89
3 12 0.0029 0.26 11.9 0.1 2 23 618 640 617 640 0.96
4 12 0.16 15 6.4 0.7 1 23 658 682 658 682 0.92
5 12 0.012 1.1 10.0 1.8 1 21 729 749 729 754 0.95
6 12 4.3e-05 0.0039 17.6 0.3 1 23 814 835 814 835 0.98
7 12 0.00075 0.068 13.7 0.1 1 21 841 861 841 862 0.95
8 12 5.1e-05 0.0046 17.4 3.1 1 23 881 903 881 903 0.98
9 12 0.0039 0.35 11.5 0.1 1 23 908 933 908 933 0.93
10 12 0.021 1.9 9.2 4.6 1 22 942 963 942 964 0.91
11 12 0.083 7.4 7.3 0.7 3 23 978 1000 977 1000 0.92
12 12 0.0013 0.12 12.9 1.2 1 21 1006 1026 1006 1031 0.94

Sequence Information

Coding Sequence
ATGGAAAGTTACGAGGACGACGACGATACTCACTTCTGCATCAAATGCCATCTGACGATACACGGCCTCGACAATTACGTACGACATCGTCAATCCGGATGTCGGCCACCGGACGACAAGAACGTAGCCGTGCGGGTATCACCCACGACGCCCGCTTCGCCGACCACCGTTTTCTATCCGGAGATTCTGAACGCGGACGCGTTCTTCAGTTCGCTGGAACTACAGAGCAGCTCCAAGTCGAATCCACGAAAGGCATCCGGTTTGCTCGAGGAAACTAGGAAGTTCAAGAAGGACGACAAAAGGAAAAAGAGTCAGAAATCGCAGGTGGACGCGGACGAATCGACGGTAAAAGAGAAGCTTCAGAATATGTTGCCCGGAGTTTCGGAGCTCGAAAACCCGACCGACCATCTCTGCATGCCATCCCTCGTTGGATTTCCCGATATCGTTCCGTCCACGTCCAATAAGCCTACGGTTGCGAGCAACCGGAACAAATTAAGTCAATCGATGGGCAACGTCGCCACGAACATCGACAGCGGTGGATTTTCGGTGAAGCCCGAGCCGGAAAATTCCTTGGAAGGTCTGATGACGTCTCAGGAATCCAAGCAGTCGGATAGAAAACGACAGGAAGAATCGCAAAGGATCGAACAGGTTCATCAAACGTGGTTGGAATACACGATATTGGCCGAGCTGGTGTCGAACAACGAAAACAAGGATCTGACCAGATACGAGTACGAATATCAACAGGACGAGGATTCGGAGGACGATATATTGGAGGAAGATTTGGGGGAGGATGACTCTTATTCCGAGTCTGACGATGGGGAAGATCGAGAACGTCCGCCGCGTGGTCACATTGGTGGCAAATGGAAGCCAGAATTGGACGATCTTCCTCAAAATATGTCTCAACTTCAGGACGACGACGTGGAGCCCGAAGACGAACATCAAGAACATCCGCCGCCGACTTATACAGGGGGCAAGTGGCGACCCTCGGACGCCTCGCAGAAGACAGAAGAGTACGAGACTAAGAGCAACGTTGGACAACCATCGCCAGGACACACACGAGGGAAATGGGTACCGGGCGCACAAACGGATATCGAATCAGGATATTGGTGCAGTCCTTGCGGCAGGAAACTTGCCTCTCGATTGGTCTACAACAGGCATCTTCTCTCTGATTTGCACGCTAGAAGGAGCATCCGAGAAATCGATGGCGTTCTTTGCCAGCCGCGTACCGTCAACATGCAAGCACTGAAAAAATCATCGACTCGTAATCAAAAAACTAAACAAGCGGGGGAAACGAAAGAAGCGAAGAAAAGTTTGCGAAAACGAGAAAAGGAAATACTTTGTTGCGAAATGTGCCATGCCCGAGTGAGAAGAACGCAAATGGGCAAGCATTTGCTCTCTCATTATCACTGCCGCGTGGCAGGTGTAAATCCTTGCGGCCCACGGGCGCGTCGCTTTTTGCTAGAAAATATGGCGAATGTGGTTCGGCAGTGCCCTTTTCAGTGTTTCTCTTGTCGTTTTTACTGTAACACAGAGGAAACATTCCTGCGTCATTGGCGATCCGATCTTCATGCAAAAACTCTCGACCAGATCGCCGGCAGTTACAGATGCACTCCTTGCGACTTTTGGTGCGAGGACAACGAAACGATGGAAGCGCATCTGGTCGATTCGAGTCATCGCGACGTTGTTTCCATGATGAATGGTTCGGTACCGATCATGATAGGTCGTCAGCGAGCTCTGATCTGCGGCGGTTGCGATCGTCGATTTCGATATAATTTGCAACTTCGATTGCACATCAAGGAAACTGGCCACGAAGAGAGTTTGACCGCGACGGACGAATATCAACAGCGAATCAAATGCAATCTGTGCCCGCAAATAGTTCGATCGTTGGTGGCACTTCAGCGTCACCAGTTGTCTTCTCACGTCACGAAGATCGAGAAACACGAGACGAACGATTCGTCCCAGCCAACGCCTTATTTCTGTTCGTTCTGCTCGATGAACTTTGCCACTGCTCGAGAAGCCGTATTACATCGAAGAACGTCCAGTCACAAGGAGATAGTGAAGGCTCGGAAAAGCAACGAAGGCCCATCCACGTCCACGGTTCGGCAGTGTCCTTATTGCAAGCAGAAGCAGGCGAATTTGTCGGAGCACAAGGCACACCTTCTCGATAGTCACCCCGAGCTTTGTTACAGATGTCCCAAATGCGGTACGTTGTTTGCCCTCTCGCAAGACGTGACGAGGCACACGAGGGAAAACAAGTGCCATGACTCAAACGATGAATCGAATAAAACGAAAACAGCGGACGCGAGAGACGAATGGAAATGCAACAGCTGTAGCTTCTCGACCAACATTCAAGCGGAATTTATCTTCCACGAAGCTCTTCACGCCGGGATCGTGCGAAACGATAACGAAGACGAGAGCTCTGGCAAATCATTGGCGAAGTATTCTTGCCCCATCTGCAAGAAGGCATTCGCGAAAGTGTCGTTACGGAATCACATCAGAAGCCACACCGGAGAGCGGCCGTTTCCGTGTGCCAAGTGCCTGGTGCCCTTTTCCAGGAGATCCGACCTAAACGCCCATCAGAAAGAGTGCACGGCTTCGACATCGTCGGGATGGTCGGAAGGTTTGGGACGGAAACGCAGCTTTGTTTGTTCCGAGTGCAACAGCGCCTTCTACACAAAGCACTCGCTGCGACAGCATATGCTGCGCCACGCCGGGAAAAAGTACAAGTGCGGACTTCCGGGCTGTCCAACGGTGCTCCGAACAGCCTCCGAATTGAGATCGCACAGAACCTTGGTACACGACAGCACGCCGTCTAATAGACGATACAAGTGCTCCGATTGCTCTTACGCGGCCAAAACAAAGACTCAGCTACGCCGACACTGCACTCGGCACGAAGAAGCAGGGAACGTGGCAAAATCAGAACTTCGCGCATGTCCCTACAGTGGTTGCGCTTTTAAAACGAAGCTCGCTTCTCATTTGCAGCGGCACGTGCGTCTCCACACGGGCACAAAGCCATACAAGTGTCGTCATTGTCCGTACGCCAGCAACAACTTGGAAAACCTGAGGAAACACGTGTTGTCCACGAACTTGCATCCCGGCAAGACGATCTACGAATGCAACGTTTGCCAAGAAAACAACCCGGAGCCGTTCCAGACGAATTTCGCGAAGGAGCTTCGCGCGCATCTGTTGGAAGTGCACAGCGACGCTTTTCCAACTCCTAATCACGCGAACGATTACGTGGTCGGGATTTTTAAGGTTCGACGAGACGGCGACGAGTCAAATTAA
Protein Sequence
MESYEDDDDTHFCIKCHLTIHGLDNYVRHRQSGCRPPDDKNVAVRVSPTTPASPTTVFYPEILNADAFFSSLELQSSSKSNPRKASGLLEETRKFKKDDKRKKSQKSQVDADESTVKEKLQNMLPGVSELENPTDHLCMPSLVGFPDIVPSTSNKPTVASNRNKLSQSMGNVATNIDSGGFSVKPEPENSLEGLMTSQESKQSDRKRQEESQRIEQVHQTWLEYTILAELVSNNENKDLTRYEYEYQQDEDSEDDILEEDLGEDDSYSESDDGEDRERPPRGHIGGKWKPELDDLPQNMSQLQDDDVEPEDEHQEHPPPTYTGGKWRPSDASQKTEEYETKSNVGQPSPGHTRGKWVPGAQTDIESGYWCSPCGRKLASRLVYNRHLLSDLHARRSIREIDGVLCQPRTVNMQALKKSSTRNQKTKQAGETKEAKKSLRKREKEILCCEMCHARVRRTQMGKHLLSHYHCRVAGVNPCGPRARRFLLENMANVVRQCPFQCFSCRFYCNTEETFLRHWRSDLHAKTLDQIAGSYRCTPCDFWCEDNETMEAHLVDSSHRDVVSMMNGSVPIMIGRQRALICGGCDRRFRYNLQLRLHIKETGHEESLTATDEYQQRIKCNLCPQIVRSLVALQRHQLSSHVTKIEKHETNDSSQPTPYFCSFCSMNFATAREAVLHRRTSSHKEIVKARKSNEGPSTSTVRQCPYCKQKQANLSEHKAHLLDSHPELCYRCPKCGTLFALSQDVTRHTRENKCHDSNDESNKTKTADARDEWKCNSCSFSTNIQAEFIFHEALHAGIVRNDNEDESSGKSLAKYSCPICKKAFAKVSLRNHIRSHTGERPFPCAKCLVPFSRRSDLNAHQKECTASTSSGWSEGLGRKRSFVCSECNSAFYTKHSLRQHMLRHAGKKYKCGLPGCPTVLRTASELRSHRTLVHDSTPSNRRYKCSDCSYAAKTKTQLRRHCTRHEEAGNVAKSELRACPYSGCAFKTKLASHLQRHVRLHTGTKPYKCRHCPYASNNLENLRKHVLSTNLHPGKTIYECNVCQENNPEPFQTNFAKELRAHLLEVHSDAFPTPNHANDYVVGIFKVRRDGDESN