Emex005418.1
Basic Information
- Insect
- Eufriesea mexicana
- Gene Symbol
- Lztr1
- Assembly
- GCA_001483705.1
- Location
- NW:657175-666252[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-13 9.8e-11 41.0 0.6 3 107 350 491 348 494 0.82 2 4 1.3 2.1e+02 1.3 0.1 76 108 492 524 489 526 0.87 3 4 2.8e-18 4.3e-16 58.2 0.0 9 96 586 673 578 689 0.83 4 4 1.1 1.7e+02 1.6 0.1 76 100 687 711 677 720 0.80
Sequence Information
- Coding Sequence
- ATGGATAACGTTGCAGAGTGTTTAACTCTTGATTTTGGCCCTTTCGAAACTGTTCATCGCTGGCAACGTATGCCAGAATGCGACGAATTCGTTGGCGCCAGGCGTAGCAAACATACTGTTGTAGCATACAGAGATGCAATCTATGTATTTGGTGGGGATAATGGTAAAAGAATGTTGAATGATTCATTGAGATTTGATGTGAAAGAAAAGTCCTGGGGACGTGCACTTGCAACAGGAGCACCTCCAGCTCCACGGTATCATCATTCTGCAGTTGTACATGATTCTTCTATGTTTGTATTTGGTGGTTACACTGGTGACATACATTCCAATTCGAATCTCACCAATAAGAATGATCTATTTGAATACCGATTCCAAACTGGTCAATGGACAGAATGGAAATTTATTGGAAAAACCCCAGTAGCTAGGTCTGCGCATGGAGCTGCTGTATTTGATAATAAGTTATGGATATTTGCTGGCTATGATGGTAATGCAAGATTAAATGATATGTGGACAATATCATTACTACCTGGAGAACCAAGAGTATGGGAGGAGGTTGTTCAGTCTGGTGATCGTCCACCAACATGTTGTAATTTTCCTGTTGCAGTAGCACGTGAATCTATGTTTGTTTTTAGTGGCCAAAGTGGAGCTAAAATCACAAATAGTCTTTTCCAATTTCACTTTCGCGAAAAGCGATGGACACGAATTTCAACGGAGCATATACTTCGTGGTGCACCACCTCCGCCAGCGCGACGGTATGGTCACACAATGGTCAGCTTTGATAGACATCTTTACGTGTTTGGTGGTGCAGCTGATTCTACACTACCTAATGATCTCCACTGTTATGATCTTGATACACAAACATGGAATATTATTTTACCATCTGCTGATAGTCAAATTCCTTCTGGTCGCCTGTTTCATGATGCAGCAGTAATCGGGGGGGCGATGTTTATTTTTGGTGGAACAGTTGACAATAATGTACGCTCTGGAGAGACATATCGATTTCAGTTTTCATCCTATCCAACATGTACCTTGCACGACGATTTCGGGAGATTGTTGAAGGGACGACTTTTCTGTGATGTAGAATTTATAGTAGGGGATACGAAAACGAAAATACCTGCTCACATATCCATGGTAGCTGCTCGTTCCCAATTTCTTAGGACTCGCATTAGACAAGCACGAGAAGAACGAGATAAACGTTTGGAAAAAGTCTTTGGAACTGTGCATGTACCAATTAAAGATATGCCGTTGTTAGAGGTAAGCCTGAAGGATGCTGAACCAGAAGCATTTGAAATGGTCCTAAACTACATTTACACCGATCGTATCGATCCAACTAAAAGAAACGAGGATGGATCTAGCAGTCGCGTTGAAGATCTATTAAGCAATCGAATTGTGCTCCTTATGATGGATGTCTATCGTTTAGCTTTGCAATTCAACATGAAACGATTGGAGCAGTTGTGCGTGCAATATTTAAAAGCGACCATAAGTCATGCTAATGTTTTGGAAGCATTGCACAATGCCGCCCACttaaaactatattttataaAGGATTTTTGTTTAAGCTTTATTGTAAAAGAAATCAATTATAATCAGATTGTGATGAGTAAAGAATTTGAGACCTTAGATCAGCCTCtaatggtggaaattattagGAAAAGACAAATGCCTCAAAGAGGTGCATTCTCTAGACAATGTGACCTAAGTACAGgGACGACTTTGGAACAGGATATGGAGGCATTTCTTAAAAGTGTTGGCAGAGAATTCTGTGATATTAGGCTTATGTTAGATGGCGTGCCAATTCCGGCTCATAAAGCCATTCTTGCGGCACGTTGTAGTTATTTCGAAGGAATGTTTCGCTCTTTTATGCCAAAAAATAATACAGTGAATATACAAATCGGGGAAATGATTCCATCTTCCGAGTCATTCGATTCTTTATTAAGGTACATTTATTATGCAGACGTTTCAATGCCACCCGAGGACTCTTTGTATTTATTTACTGCACCAGTTTTTTATGGCTTCACAAATAATCGACTGCAAGCGTTTTGCAAGCAAAACCTCGAGATGAATGTCACCTTTGAGAATGTCATACAGATCTTAGAAGCTGCGGATAGAATGCAAGCTGTTGACATGAAGAAATATGCGTTAAATCTTATCGTGCATCATTTTACAAAGGTCGCAAGGCTTCCGAGGTTAAAACAATTAAGTCGTGAACTTTTATTGGATATTTTGGAGGCATTGGCTGACGAACGCAGCGAAGCACGAACATGTCAAGACATGGCAAACGATTGCTGA
- Protein Sequence
- MDNVAECLTLDFGPFETVHRWQRMPECDEFVGARRSKHTVVAYRDAIYVFGGDNGKRMLNDSLRFDVKEKSWGRALATGAPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKNDLFEYRFQTGQWTEWKFIGKTPVARSAHGAAVFDNKLWIFAGYDGNARLNDMWTISLLPGEPRVWEEVVQSGDRPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFREKRWTRISTEHILRGAPPPPARRYGHTMVSFDRHLYVFGGAADSTLPNDLHCYDLDTQTWNIILPSADSQIPSGRLFHDAAVIGGAMFIFGGTVDNNVRSGETYRFQFSSYPTCTLHDDFGRLLKGRLFCDVEFIVGDTKTKIPAHISMVAARSQFLRTRIRQAREERDKRLEKVFGTVHVPIKDMPLLEVSLKDAEPEAFEMVLNYIYTDRIDPTKRNEDGSSSRVEDLLSNRIVLLMMDVYRLALQFNMKRLEQLCVQYLKATISHANVLEALHNAAHLKLYFIKDFCLSFIVKEINYNQIVMSKEFETLDQPLMVEIIRKRQMPQRGAFSRQCDLSTGTTLEQDMEAFLKSVGREFCDIRLMLDGVPIPAHKAILAARCSYFEGMFRSFMPKNNTVNIQIGEMIPSSESFDSLLRYIYYADVSMPPEDSLYLFTAPVFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAVDMKKYALNLIVHHFTKVARLPRLKQLSRELLLDILEALADERSEARTCQDMANDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_00216471;
- 80% Identity
- -