Emex007534.1
Basic Information
- Insect
- Eufriesea mexicana
- Gene Symbol
- Hr39
- Assembly
- GCA_001483705.1
- Location
- NW:522527-565686[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6 6.4e+03 -4.7 5.0 124 169 42 72 21 103 0.43 2 4 4 9.9e+03 -14.0 19.0 112 150 402 438 238 530 0.57 3 4 4.8e-08 0.00012 20.8 0.0 1 23 597 619 597 629 0.91 4 4 5.7e-71 1.4e-67 228.1 0.1 183 408 754 974 621 974 0.75
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCGGCGAGGGCCCAGGACCGGGCCCGGGGCCGGGTCCTGGCTGGTGGCCAGCCTCGCAGTCTTGGAAGACAAACTCGTGCACCGCCGCCTCCTCGTCCACCGGTTCCACCGCCCCAGACAACTCCGCCTCCGTCTCTGCCTCCTGCACCACCACTACCTCCTCTCTGACCACCACTACTTCCGCCACTTCCTCCACCCCTGGCGGACCGACCTGCACCATCACCGCGGCCCGTTCTTCCGAAACAGGAAAGAATGTCTCCGTCACCACTATCAACGTACCCCCCAATCAGGATATGCACGATGGCAAAGGTATATGCAAGTATCTGACCGGGCAGAATGGTGTGACAGTATCCGTAGTTTCAAGTTGTGGCTCCGTACTAGGCTGTGGAAATGCGAACGTCGTATCTACCACGGGAATCGGCAACAGCACTGGGACGCAAAGCATCGGTATCGGGATCGGAGTGAATGTTCTGAACCAGAACACAGTGGATGACGATGCGGAGGATAGTGACGTTGAGATAAGCAAAATCGACTTTCGAGGGGTGAATTTACGTACGAAGAAGAAGCGAGACGTATCGGGTAGTCAAAGCGGAGAGAAAATCGGTGATGCGGATGTCGAAGATGGAAACGGTTGCTACGATGGGAACGACGTGTCACAGCAACAGCCGGAGAGACCCATGTCATGGGAAGGAGAACTATCCGACCAAGAAATGTCTTCCAATACAATTACAAATCAAGATACACACGAGGACACATCGATGGAGGGTGTGCAAGTATGTGGCGCAAGCCCTGGGCCTATAGAACAGAAATTTCCTATAAAACCAGAGCCAGATTTTCGATCCAGCCCAGGATTTACGCTTGGTTCTTTTCACGATGCAGGATTGCCTCTGGCCCATGGCCAGCAAATgcaacaacagcaacagcaacgcAACATTGAAAATCTTGAACAAACACAACAAAATGATTTGCCTCTTCTCGTAGGAAAATTACTCGGAGGCTACAATAGTTCAACTCCGAATCACAGTCCAGTGTTAAATCCTCGACATCATTTAACGAAGCATAGTCACACGAGATCACAGGTGCCGTCACCAGATTCGGCAATTCATTCCGTATACAGCGTATTCAGCTCTCCGACGCAAAGTCCACACGCAGCTCGTCACTCTGCTTTAGGCGCAGGAAGTCCAGTACCATCTTCGTCGTTATCTTTGTCGCGACATAGTTTCAACAATTCGACCTCCTCGTTGTCTCTGTCACACTCACTCTCAAGGAACAATTCAGATGCTTCGAGCAGCTGCTATAGCTATGGCTCTCTCAGTCCTCCTACGCATTCACCCGTTCAGCAACCAAGACATCCGCAACATCATCAGCATCAGGTTGCTCAAGGAAGCCCGCTTCATTTGCCGGCAACAGCCTCGCCTGCCATTGCTCATCATTATTCTTCCTCTGCACCGGGTTCAGAGCTGCCTTCGGAAGGACACACTGCTACTGATGATCAGGAAGACTGTCGAATACCATCAGCGCCATCTGGTATTTCAACTAGACAACAACTAATCAATAGTCCATGTCCAATTTGCGGAGATAAGATTAGTGGTTTTCATTATGGAATTTTCTCATGCGAATCCTGCAAAGGCTTTTTCAAACGCACCGTCCAGAATCGGAAAAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTTGCTACCAGAAAAAAATGCCCCGCCTGTCGATTTGACAAGTGCCTCAATATGGGTATGAAGCTTGAGGCGATTAGAGAGGATCGCACCAGAGGTGGAAGAAGTACCTACCAATGTACGTACACGCTCCCAGCAAGCCTTGTCGGTAGTTCTGCAAGCAGCATGACCAATGACAAATTAAACACTGGAGGAAATTGTAGTCCAGCTCCAACTGGCAATGAACATTACTATACAGCAAGGCATCATTCGAATCACTCCCATAAAATGCAAGTGGTACCACAACTTCTACAGGATATCATGGATGTGGAACACTTATGGCATTACAATGATAATGATCGCATGACTGGGATTCAAGCTGGTGGGACAAATACTATCAGGAACAATGATACTATGTTATTAGGAGTGGGAAGTGGTGGAGGTTCTGGAACAGGAAATGAAACAGGTTCAGGTGTTGAGTGTTCCTCTAATGGAACTTCAGGAAATGGCAACTCCAGTAACAGAAGAGATGAAAGATCGTGCTCTAATGTTCCCACAGTTAGTAATGAACAACGAGCTGCAGCCATTAGTAGTAGCTCtcaaattaataatacaaatggTAATCCAACTCAGCATCCTGATTTTCTGTCGAACCTCTGCAACATTGCTGATCATCGACTCTATAAAATAGTGAAGTGGTGCAAAAGTTTGCCGCTATTTAAAAACATTTCGATCGATGATCAAATTTGTCTGTTAATTAACTCTTGGTGCGAACTACTGCTCTTCTCGTGCTGTTTTCGCAGTATGAGCACTCCTGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTGGAACAGGCTAGACAGCTTGGCTTAGCGACCTGCATCGAGAGGATGCTTGCGTTTACTAACAATTTGCGAAGGCTTCGTGTAGATCAGTATGAATATGTGGCAATGAAGGTAATAGTACTCTTGACCTCTGATACAAGTGAGCTGAAGGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAAGCTTTACAAGCACTACAGCAATATACTATAGCAAGGTACCCAGAGATGCCTGCTAAATTTGGTGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGTCAAGCAGGGAAAGAATTGTTAAGCGCGAAACGTGCTGAAGGGGAAGGCAGCTCATTTAATTTGTTGATGGAATTGTTGAGAGGGGATCATTGA
- Protein Sequence
- MSEQNGPGEGPGPGPGPGPGWWPASQSWKTNSCTAASSSTGSTAPDNSASVSASCTTTTSSLTTTTSATSSTPGGPTCTITAARSSETGKNVSVTTINVPPNQDMHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVVSTTGIGNSTGTQSIGIGIGVNVLNQNTVDDDAEDSDVEISKIDFRGVNLRTKKKRDVSGSQSGEKIGDADVEDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPIEQKFPIKPEPDFRSSPGFTLGSFHDAGLPLAHGQQMQQQQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSVYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPAIAHHYSSSAPGSELPSEGHTATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSSASSMTNDKLNTGGNCSPAPTGNEHYYTARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMTGIQAGGTNTIRNNDTMLLGVGSGGGSGTGNETGSGVECSSNGTSGNGNSSNRRDERSCSNVPTVSNEQRAAAISSSSQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733987;
- 90% Identity
- iTF_00141880;
- 80% Identity
- iTF_00684199;