Basic Information

Insect: Eudonia truncicolella
Gene Symbol: -
Assembly: GCA_949315975.1
Location: OX438852.1:7843342-7844970[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.5e-06 0.00031 21.7 0.6 2 23 101 123 100 123 0.95

2 14 0.00012 0.01 16.9 1.5 2 23 131 153 130 153 0.96

3 14 0.017 1.4 10.1 3.0 2 23 160 182 159 182 0.90

4 14 5.7e-06 0.0005 21.0 0.5 3 23 191 212 189 212 0.96

5 14 0.00058 0.05 14.7 0.1 3 23 220 241 218 241 0.94

6 14 0.0017 0.15 13.3 1.9 1 23 248 271 248 271 0.97

7 14 0.00011 0.0098 16.9 5.9 2 23 277 299 276 299 0.96

8 14 0.00016 0.014 16.5 0.5 3 23 316 337 314 337 0.94

9 14 0.0038 0.33 12.1 1.1 2 23 345 367 344 367 0.96

10 14 6.9e-06 0.0006 20.7 3.7 2 23 373 395 373 395 0.97

11 14 0.01 0.89 10.8 3.7 2 23 403 425 402 425 0.91

12 14 2e-05 0.0017 19.3 3.9 2 23 432 453 431 453 0.97

13 14 9.3e-05 0.0081 17.2 1.8 1 23 458 481 458 481 0.98

14 14 0.13 11 7.3 0.2 2 20 497 515 497 517 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.5e-06	0.00031	21.7	0.6	2	23	101	123	100	123	0.95
2	14	0.00012	0.01	16.9	1.5	2	23	131	153	130	153	0.96
3	14	0.017	1.4	10.1	3.0	2	23	160	182	159	182	0.90
4	14	5.7e-06	0.0005	21.0	0.5	3	23	191	212	189	212	0.96
5	14	0.00058	0.05	14.7	0.1	3	23	220	241	218	241	0.94
6	14	0.0017	0.15	13.3	1.9	1	23	248	271	248	271	0.97
7	14	0.00011	0.0098	16.9	5.9	2	23	277	299	276	299	0.96
8	14	0.00016	0.014	16.5	0.5	3	23	316	337	314	337	0.94
9	14	0.0038	0.33	12.1	1.1	2	23	345	367	344	367	0.96
10	14	6.9e-06	0.0006	20.7	3.7	2	23	373	395	373	395	0.97
11	14	0.01	0.89	10.8	3.7	2	23	403	425	402	425	0.91
12	14	2e-05	0.0017	19.3	3.9	2	23	432	453	431	453	0.97
13	14	9.3e-05	0.0081	17.2	1.8	1	23	458	481	458	481	0.98
14	14	0.13	11	7.3	0.2	2	20	497	515	497	517	0.92

Sequence Information

Coding Sequence: ATGGAGGTAGTGATAGAAGTGGAACCGTACATTGAAGATgacgaaacaaaacataactttgATAGCAGTATAATTACTAATGAAAGCCCTAGTACCGATGGTATTGttaaaacagaacaaaatacaacaggctatattaaaataGAACAGAGCACATCTGTTCATAGCGACAAACCTTTAAATGACTTTTTAGGGAATTCCGGAACAGATttagatgataatgacgatgccAGTATCACACCTGCTAGAACAATAAAGTTTGATGGTAAAGTCTACGCAAACGGCAAGAGGAATCGTCTGCAATGTCCTCAATGCGATACGACGTTCAAAAACCGGGCCAACCTCAAGGGACACCTCAAATACATACACGCAACAGAGGACGAAACAAAGGAATGCGACATCTGCTACCGAACGTTTAAATCGCTGGTGCATCTGCGTTCGCACGTGAACTCTATCCATGCCAAAGACAAAGAGGTCACATGTGATCATTGCggcaaaaactttttaaacaaaaagaagTTAAGCAATCACGTTTTCTACACACATCCGAAACCTGAGGAAGACGTCATATGCGGAGTATGCTCCAAAGTGTTTAAAACGAAATACAGATTAAAACTACACATACGTACAGTACATCCGGAAGGGAAAAACGTTAATTGCCCTAACTGCGCTAAAGAGTTTAAATCGGAAATGCTGCTCCAAAGACATGTGAAATGGGCTCACCCGTCAGACGGCATGTCTTACCGATGTCAAGACTGCGGTAGAGTTCTCCCATCTATCCAATGCTTCAAGAAACATCTGAAGAACGTACATGGTTTGGGTAATATCAAATGTGATCACTGCGACAAGGTATTCCAAACGAAAAACACTTTGCATCGGCATGTAAAAAGGTTCCATGAAGGTGTTATAGTAGAGAAGAAGGAGTACAAAAGTGGCCAGTTGGACTGTGATAAATGTGACAAGAAATTTAGTACGGTTACCGCTTTAACTTGGCATAAAGAGCGGTTGCACTCAGATAACAAGTTGACTACGACATGCCAGTTGTGTTTAAAAgagtttggtgatcacaacggTTTGAAACGGCATCTGGAAACCGTGCATTCCATGGAGACTGCCACGTGTCATATATGCTCAAAGACATTCAAGTCCTACTTGAACTTGCAGAGACATTTGCGTGTAACCCACGCGCCGCCGGAAGCTGCTCAGACTTGCGATATATGTAAAAAGACGTTTAAATGCTCGATGCACTTGAAAATTCATATATACGCAGTACATCCTAAAGAAGGTAGGGTCAGTTGTCATATCTGCAAGAAAGAGTTCTCatccaaaaagtatttattaaaacacgAAAAAACTCATTACGGCAAAGAGTATGAGTGCACTATATgcggtaatttttttaaaactatgcaCGATGTCAATAGGCATGTACGGAGAGTTCATACGAAGGACAAGATGAGAGTGATCGAGAGAAAGCGAAATGATCGGACCTGTTTGCAGTGTGGATTGAATTTCAACGATGATCTGTCGTTGCATAAACATATAGCGATTTGTGGTGTCGACTTGAATACCCACACTGCTTTCATTAAAGTGGAATTGGAAGAGAGTTGTGCCGATGTCAATGAGTGA
Protein Sequence: MEVVIEVEPYIEDDETKHNFDSSIITNESPSTDGIVKTEQNTTGYIKIEQSTSVHSDKPLNDFLGNSGTDLDDNDDASITPARTIKFDGKVYANGKRNRLQCPQCDTTFKNRANLKGHLKYIHATEDETKECDICYRTFKSLVHLRSHVNSIHAKDKEVTCDHCGKNFLNKKKLSNHVFYTHPKPEEDVICGVCSKVFKTKYRLKLHIRTVHPEGKNVNCPNCAKEFKSEMLLQRHVKWAHPSDGMSYRCQDCGRVLPSIQCFKKHLKNVHGLGNIKCDHCDKVFQTKNTLHRHVKRFHEGVIVEKKEYKSGQLDCDKCDKKFSTVTALTWHKERLHSDNKLTTTCQLCLKEFGDHNGLKRHLETVHSMETATCHICSKTFKSYLNLQRHLRVTHAPPEAAQTCDICKKTFKCSMHLKIHIYAVHPKEGRVSCHICKKEFSSKKYLLKHEKTHYGKEYECTICGNFFKTMHDVNRHVRRVHTKDKMRVIERKRNDRTCLQCGLNFNDDLSLHKHIAICGVDLNTHTAFIKVELEESCADVNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00681809;
90% Identity: iTF_00682668; iTF_00681809;
80% Identity: -