Basic Information

Insect: Eudonia mercurella
Gene Symbol: -
Assembly: GCA_963082485.1
Location: CAUJAO010000022.1:40808-46237[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.9e-06 0.00056 21.4 0.6 2 23 201 223 200 223 0.95

2 14 0.00017 0.019 16.6 1.5 2 23 231 253 230 253 0.96

3 14 0.023 2.6 9.8 3.0 2 23 260 282 259 282 0.90

4 14 1.3e-05 0.0015 20.1 0.9 3 23 291 312 289 312 0.96

5 14 0.0003 0.034 15.8 0.1 3 23 320 341 318 341 0.94

6 14 0.00047 0.053 15.2 1.2 1 23 348 371 348 371 0.97

7 14 0.00016 0.018 16.7 5.9 2 23 377 399 376 399 0.96

8 14 0.00022 0.025 16.2 0.5 3 23 416 437 414 437 0.94

9 14 0.0052 0.6 11.9 1.1 2 23 445 467 444 467 0.96

10 14 9.6e-06 0.0011 20.5 3.7 2 23 473 495 473 495 0.97

11 14 0.014 1.6 10.5 3.7 2 23 503 525 502 525 0.91

12 14 2.7e-05 0.0031 19.1 3.9 2 23 532 553 531 553 0.97

13 14 0.00013 0.015 16.9 1.8 1 23 558 581 558 581 0.98

14 14 0.18 21 7.0 0.2 2 20 597 615 597 617 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.9e-06	0.00056	21.4	0.6	2	23	201	223	200	223	0.95
2	14	0.00017	0.019	16.6	1.5	2	23	231	253	230	253	0.96
3	14	0.023	2.6	9.8	3.0	2	23	260	282	259	282	0.90
4	14	1.3e-05	0.0015	20.1	0.9	3	23	291	312	289	312	0.96
5	14	0.0003	0.034	15.8	0.1	3	23	320	341	318	341	0.94
6	14	0.00047	0.053	15.2	1.2	1	23	348	371	348	371	0.97
7	14	0.00016	0.018	16.7	5.9	2	23	377	399	376	399	0.96
8	14	0.00022	0.025	16.2	0.5	3	23	416	437	414	437	0.94
9	14	0.0052	0.6	11.9	1.1	2	23	445	467	444	467	0.96
10	14	9.6e-06	0.0011	20.5	3.7	2	23	473	495	473	495	0.97
11	14	0.014	1.6	10.5	3.7	2	23	503	525	502	525	0.91
12	14	2.7e-05	0.0031	19.1	3.9	2	23	532	553	531	553	0.97
13	14	0.00013	0.015	16.9	1.8	1	23	558	581	558	581	0.98
14	14	0.18	21	7.0	0.2	2	20	597	615	597	617	0.92

Sequence Information

Coding Sequence: ATGACATCTTGGAGGTCTAAGAGAATCCTGGACTTGGTATCCCAAACGAAGATTGATTCTGAAAATCAAGAATTAGGGGATAGCGATCGAAAAGGTTACGAAGAgATGAATAAATCTGTTGAAATCGAAAAAGAAAACCAAGAAAATGTGTTTACCGAGTCTAATTTAGTAACTGAAGTGCAAGAGACGGCACCGATCCAAGAGTTGCTggtgattgaaaaaaaatacgaAACCACTATGGAGGAAGAGACAGAGAAAGTGTTTATAAAACAAGAAGCGGGAACCGAGAATGAATTCAAAATGGAAGTAGTGGTAGAAGTGGAACCATACATTGAagatgatgaaacaaaacataacGTTGATAGCAGTATAATTAGTAATGAAAACACCAGTACCGATGGTATTGttaaaacagaacaaaataCAACAGGCATTGTTAAAATAGAACAGAACACATCTGTTCAAACCGATAAAccttttaatgatgttttaaagaATTCCATAACAGCTTtagatgataatgacgatgccAGAATCACACCTGCTAGAACAATAAAGTTTGAAGGTAAAGTCTACGCAAACGGCAAGAGGAACCGTCTGCAATGCCCTCAATGCGATACGACGTTCAAAAACCGGGCGAACCTCAAGGGACACCTCAAATACATACACGCGACAGAGGACGAAACAAAGGAATGCGACATCTGCTACCGAACGTTCAAATCGCTGGTGCATCTGCGTTCGCACGTGAACTCTATCCATGCCAAAGACAAAGAGGTCACATGCGATCATTGTGGCAAAAACTTTTTGAACAAAAAGAAGTTGAGCAATCACGTATTCTACACACATCCGAAGCCTGAGGAAGACGTCATATGCAGGGTATGCTCCAAAGTGtttaaaacgaaatacagaTTGAAACTACACATACGTACAGTACATCCGGAAGGGAAAAACGTTAATTGCCCTGACTGCGCTAAAGAGTTTAAATCGGAAATGCTGCTCCAAAGACATGTGAAATGGGCTCACCCGTCCGATGGTATGTCTTACCGATGTCCAGACTGTGGTAGAGTTCTCCCATCTATCCAATGCTTCAAAAAACATCTGAAAAACGTGCACGGCTTGGGTAATATCAAATGTGATCACTGCGACAAGGTATTCCAAACGAAAAACACCTTGCATCGGCATGTGAAAAGGTTCCATGAAGGTGTTATAGTAGAGAAAAGGGAGTACAAAAGTGGCCAGTTGGACTGTGATAAATGTGACAAGAAGTTTAGTACGGTTACTGCTTTAACATGGCATAAAGAGAGGTTGCACTCAGATAACAAGTTGACTACAACATGCCAGTTGTGTTTAAAAGAGTTTGGTGATCACAATGGTTTGAAACGGCATCTGGAAACGGTGCATTCCATGGAGACTGCCACATGCCATATATGCTCAAAGACTTTCAAGTCTTACTTGAATTTGCAGAGACATTTGCGTGTAACCCACGCGCCGCCGGAAGCTGCTCAAACTTGCGATATATGTAAAAAGACGTTTAAATGCTCAATGCACTTGAAAATTCATATATACGCAGTACATCCTAAAGAAGGTAGGGTCAGTTGTCATATCTGCAAGAAAGAATTCTCctccaaaaagtatttattaaaacacgAAAAAACTCATTACGGCAAAGAGTATGAATGCACTATATGCGGtaacttttttaaaactatgcaTGATGTCAATAGGCATGTACGGAGAGTTCATACGAAGGACAAGATGAGAGTGATCGAGAGAAAGCGAAATGATAGGACCTGTTTGCAGTGTGGATTGAATTTTAACGATGATCTGTCGTTGCATAAGCATATAGCAATTTGTGGTGTCGACTTGAATACCCACACTGCTTTCATTAAAGTGGAATTGGAAGAGAGTTGTGATGGTGTAAATGAGTGA
Protein Sequence: MTSWRSKRILDLVSQTKIDSENQELGDSDRKGYEEMNKSVEIEKENQENVFTESNLVTEVQETAPIQELLVIEKKYETTMEEETEKVFIKQEAGTENEFKMEVVVEVEPYIEDDETKHNVDSSIISNENTSTDGIVKTEQNTTGIVKIEQNTSVQTDKPFNDVLKNSITALDDNDDARITPARTIKFEGKVYANGKRNRLQCPQCDTTFKNRANLKGHLKYIHATEDETKECDICYRTFKSLVHLRSHVNSIHAKDKEVTCDHCGKNFLNKKKLSNHVFYTHPKPEEDVICRVCSKVFKTKYRLKLHIRTVHPEGKNVNCPDCAKEFKSEMLLQRHVKWAHPSDGMSYRCPDCGRVLPSIQCFKKHLKNVHGLGNIKCDHCDKVFQTKNTLHRHVKRFHEGVIVEKREYKSGQLDCDKCDKKFSTVTALTWHKERLHSDNKLTTTCQLCLKEFGDHNGLKRHLETVHSMETATCHICSKTFKSYLNLQRHLRVTHAPPEAAQTCDICKKTFKCSMHLKIHIYAVHPKEGRVSCHICKKEFSSKKYLLKHEKTHYGKEYECTICGNFFKTMHDVNRHVRRVHTKDKMRVIERKRNDRTCLQCGLNFNDDLSLHKHIAICGVDLNTHTAFIKVELEESCDGVNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00681809;
90% Identity: iTF_00683553;
80% Identity: -