Emer012420.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- grn
- Assembly
- GCA_963082485.1
- Location
- OY720026.1:15533165-15544116[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-20 4e-16 59.5 4.7 1 35 193 226 193 227 0.98
Sequence Information
- Coding Sequence
- ATGATCGCGTTGCGTTTTGCAGGTCGGAGTCTGAGCGGCGGCAGCGGGCAGGTGTGCCGGCCGCACTTCCACACGCCGCTGCACCCGTGGCTGGAGTCGAAGGCGCTGGGTGGCGGCGCGTGGGGTGGCGGCTTCCAGCAGGACGGCTCGCCCGCCGACAAGCCGCTGTCGCCCGCGCAGCACCACCACCCCCACCCCCTGTTCTCATTCCCCCCCACGCCGCCCAAGGACTCCACGCCCGACTCCGTGGCGGCGGCGGCCCTCGGCCAGCAGGACTACCAGGCGGCCGTGGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAACAGGAGCTGCCTCTCTGCGGCGACGTCAAACCTATGATGGGGGCGCCTCCGTCGAAACAACGCGAAGGTGCGCAGCCGGACTCGTGCCCCCAGGAGTCGAGCCAGCCCTCTGGGGAATACAACGCGCAGTACAATGCCGCCGGCGGCGACTACTACAACTACCAGGGGAAAGGGTTTAGTGGGGCGCAGCAGCAGAATAAGCCGCGGCCTAACAAGACGCGGACGAGCGCCGAGGGTCGCGAGTGCGTGAACTGCGGCGCGACGAGCACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACTACAAGATGAACGGCCAGAACCGCCCGCTCATCAAGCCCAAGCGAAGATTGTTAAGGGGCAGCAATAAAAAGGCGGAGCATGCACGCCCGTGCACGACACCGCACTAA
- Protein Sequence
- MIALRFAGRSLSGGSGQVCRPHFHTPLHPWLESKALGGGAWGGGFQQDGSPADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESSQPSGEYNAQYNAAGGDYYNYQGKGFSGAQQQNKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLLRGSNKKAEHARPCTTPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00659137; iTF_00791746; iTF_00408067; iTF_00683844; iTF_00682047; iTF_00994884; iTF_01337446; iTF_01417382; iTF_01529734; iTF_01429603; iTF_01528861; iTF_01503497; iTF_01501750; iTF_00656811; iTF_00790859; iTF_00237136; iTF_00710705; iTF_01545428; iTF_01020855; iTF_00012602; iTF_00275931; iTF_00365437; iTF_01492553; iTF_01336478; iTF_00659968;
- 90% Identity
- iTF_01126020;
- 80% Identity
- iTF_00683844;