Basic Information

Gene Symbol
grn
Assembly
GCA_947063395.1
Location
OX346714.1:12497248-12509754[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.1e-20 3e-16 59.4 4.7 1 35 197 230 197 231 0.98

Sequence Information

Coding Sequence
ATGGAAATACAGCTGCTTTGTTTCATATTGGCTATTGGTCGGTCCCTGAGCGGCGGCAGCGGGCAGGTGTGCCGGCCGCACTTCCACACGCCACTGCACCCATGGCTGGAGTCGAAGGCGCTGGGCGGCGGCGCGTGGGGTGGCGGCTTCCAGCAGGAGGCGGCGCCCGCGGACAAGCCGCTCTCGCCCGCCCAGCATCACCACCCGCATCCGCTGTTCTCGTTCCCGCCGACGCCGCCGAAGGACTCAACGCCGGACTcggtggcggcggcggcgctcGGCCAGCAGGACTATCAGGCGGCGGTCGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAGGAGCTGCCGCTATGCGGGGACGTCAAGCCGATGATGGGCGCGCCGTCCTCCAAGCAGCGCGAAGGTGCGCCGCCGGACTCGTGCCCACAGGACTCGAGCCAGCCCTCCGGGGATTACAACGCGCAGTACAACGCCGCCGCCGGCGATTACTACAACTACCAGGGCAAGGGGTATAGCGGGGCGCAGCAACAGAACAAGCCGCGCCCCAACAAGACGCGAACTAGCGCCGAGGGTCGAGAGTGCGTGAACTGCGGCGCTACGAGTACGCCGCTGTGGCGACGGGACGGCACCGGACATTACCTGTGCAACGCTTGCGGCCTTTACTACAAGATGAACGGACAGAATCGACCCCTGATCAAGCCCAAACGAAGATTGAGCGATTCTCGGAAGAAACGTCTAATAGAAGTAAAGAAAGACCACAAAACTATGAGATCACTACTCCGATTGTGGACCTCACATTAA
Protein Sequence
MEIQLLCFILAIGRSLSGGSGQVCRPHFHTPLHPWLESKALGGGAWGGGFQQEAAPADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQELPLCGDVKPMMGAPSSKQREGAPPDSCPQDSSQPSGDYNAQYNAAAGDYYNYQGKGYSGAQQQNKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSDSRKKRLIEVKKDHKTMRSLLRLWTSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00682990;
80% Identity
-