Onub008719.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- grn
- Assembly
- GCA_963855985.1
- Location
- OY979738.1:12899443-12912148[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-20 3.7e-16 59.4 4.7 1 35 213 246 213 247 0.98
Sequence Information
- Coding Sequence
- ATGCCCACGTTTATTACGTACATATGCATCAGTTACCAGTCCCAAAAGGGGCAATTTTCGCCGCTAGCTAAGGAACAAAAAGGTCGGACGCTGAGCGGCGGCAGCGGGCAGGTGTGCCGGCCGCACTTCCACACGCCGCTGCACCCGTGGCTGGAGTCGAAGGCGCTGGGCGGCGGCGCGTGGGGCGGCGGCTTCCAGCAGGACGCCGCGCCCTCGGACAAGCCGCTGTCCCCGGCGCAGCACCACCACCCGCACCCCCTGTTCTCCTTCCCGCCGACGCCGCCCAAGGACTCCACGCCGGACTCCGTGGCGGCGGCCACGCTCGGCCAGCAGGACTACCAGGCGGCCGTCGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAGCAGGAGCTGCCGCTGTGCGGCGACGTCAAACCTATGATGGGCGCGCCCCCCTCGAAGCAACGCGAAGGTGCGCAGCCGGACTCGTGTCCCCAGGAGTCGAGCCAGCCCTCCGGGGAGTACAACGCGCAGTACAACGCCGCCGGCGGCGACTACTACAACTACCAGGGGAAAGGGTTTAGTGGGGCGCAGCAGCAGAGCAAGCCGCGCCCGAACAAGACGCGAACTAGCGCCGAGGGCCGGGAGTGCGTGAACTGCGGAGCGACCAGCACTCCTCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACTACAAGATGAACGGCCAGAACCGGCCCCTCATCAAGCCTAAGCGAAGATTGTTAAGGGGCAGCAATAAAAAGGCGGAGCATGCACGCCCGCACGACACTCGCTAA
- Protein Sequence
- MPTFITYICISYQSQKGQFSPLAKEQKGRTLSGGSGQVCRPHFHTPLHPWLESKALGGGAWGGGFQQDAAPSDKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAATLGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESSQPSGEYNAQYNAAGGDYYNYQGKGFSGAQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLLRGSNKKAEHARPHDTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00013689;
- 90% Identity
- iTF_00682990; iTF_01020855; iTF_00341883; iTF_00859128; iTF_00659137; iTF_00656811; iTF_00752610; iTF_01091354; iTF_00365437; iTF_01073250; iTF_00641060; iTF_00275931; iTF_00662756; iTF_00362211; iTF_01429603; iTF_00811636; iTF_01336478; iTF_00012602; iTF_00683844; iTF_00994884; iTF_01337446; iTF_01503497; iTF_01360268; iTF_01034203; iTF_01035124; iTF_00943390; iTF_00028372; iTF_00027427; iTF_01416439; iTF_01417382; iTF_01335601; iTF_01463836; iTF_01172927; iTF_00204800;
- 80% Identity
- -