Emer030323.1
Basic Information
- Insect
- Eudonia mercurella
- Gene Symbol
- -
- Assembly
- GCA_963082485.1
- Location
- OY720043.1:2276283-2278459[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 5.7e-08 33.5 0.0 1 37 14 49 14 55 0.94
Sequence Information
- Coding Sequence
- atgggcagaaatagaaaaaatcgtAAAATTGGTACTCATACTGAAGACCAAATGCAAAAGGCATTAGATGCTATAAAAACCGGTAAAAGCATCAGGCAAGCAGCTGCAGAGCATAACATTGCCTTTTCCACTCTGCAAAGATATAATGGAAAAGAAAATCCTGACCGCCTGATACCAAATTATTCCGTTCGTAAAATATTTAGGGCTGAACATGAGGTGGCCTTATGTGACTATTTCAAAAAATGTGCCTTAATGTTTTACGGTCTTACCACTAGAGATTGCCGCCAAATAGCTCATCAAATGgcgaaaataaataatgtgcCAGTTCCTGAGAGTTGGGAAAGTAATAAAATGGCTGGTATCGATTGGTTCCGAGGGTTTCGTGAGCGATTCCCTGATATGTCGTTACGAAAACCTGAAAACTGCAGCTTGGCACGAGCTACAGCATTCAATAAGGAAaccgttaaaatattttttgacaaccTTCAAAATGTGCTTAGCCGCAGTCCAGCCTTTGCAGACGGCACGCGCATTTATAATTTGGACGAAACTGCTACAAGCACTGTGCAGAAAAATCCGAGAGTTTTAGCTCCAAAGGGAAAAAGAAATATATGCAAAGTCTCCAGCGGTGAAAAAGGTACGCTCGTCACAACGTGTAACATCATAAGTGCAGGAGGTATTGCACTTCCTCCCGCATTGGTCTTCCCACGCAAGAACATAAATCCTCGGATGAAAGTTGGAACACCACCAGGTTCTCTTATCCTCGCGTCTCCAACAGGGTGGATGAACACTGAAACTTTTGTAGAGGTAATGAAGCATTTTGTGGAGCGATCGGGATCTACAAAAGATTCTCCAACAGTCCTCATTATGGACAACCACGAATCGCATTTGTCGATTGCTGCACTTGATTTGGCCAAAGAGTCGGGGGTTACTGTGCTTACTTTACATCCACATACATCGGCAAAACTTCAGCCGTTAGACGTCGGTATCCATGGACCGTTTAAATCTTACTTTGCGTCAGCAATGGAGTCATGGATGATGCGGAATCCTGGATGTCCAGTGACCATTTACGAAATTGGAACGCTAGTTGGTCAAGCCTTTGAAAAGTCTATGACACCAGTAAACATAAAGAATTCATTCAAGAAAACTGGCATATACCCCTTCGACAGAAATATATTCTCGGAGGAAGATTTTATGCCGAGCAGCGTCACTGACAGGCCTACTGTTGCAGAACCGACAGctTTTGTCGTCGACCGTAATGAAAACTTGACAGTGACCATTCAAGAAGCGGAAAATGAAATGTCAAATCGAGATGTTGACACTCCAAGTCCCTCTCTGATAGACGCCATTCAATCGTTTGTTCAATCTCCTTTACACAGCGCAAGTGCTGCGTCAGTACCGGATACGTTACCTTCAGAAGTTTGTGCTAGAATTCCAATTTCCCTGTCTCACTTGTGCTTGGAGGCAATAATTGCACCTATTAATGCAATTCCTGCAGTTCAATCAGAAGATAATCATCCTCTTTACTTAGATACTTCATCTCCACCATCAGCAGCTAGACACACTGATGAAACATCTGCCAAGTCATCATATGCCCAAATTGACTTATCGACCCGATTAGTAACACCAGAGGAATTCCGAAAACCTTTAAAAGCAGCTGCAaggaataataaaagaaaaccaaGGCGATTAGGTAAATCTCTTATTGCAACTGACACACCGGAAAATAATGAgattgagaaaaataaaaaggcaataaaaagaaagaaagtaccGCAATCCAAAGGAAAGAAAGCTGTTAAAAAAGTTCTTCAAAGCGACTCGGAAGAGGATTGTGACATTATCTTAGATGATGACTCGCCAGATGAAGGGAGCTGGTTGAGTGATGAAGCAGACACTGTAAATATTATTACGCAAGAGACGTTGAAAAAGCCTTTGCCAAGAATGCCAAGAGAGGGAGAGTATGTTTTAGTAGAATTTACGtccaaaaaacaattattgtacTATGTTGCTAAGGTactagaatttatttatttatttatttatttatgtaaataa
- Protein Sequence
- MGRNRKNRKIGTHTEDQMQKALDAIKTGKSIRQAAAEHNIAFSTLQRYNGKENPDRLIPNYSVRKIFRAEHEVALCDYFKKCALMFYGLTTRDCRQIAHQMAKINNVPVPESWESNKMAGIDWFRGFRERFPDMSLRKPENCSLARATAFNKETVKIFFDNLQNVLSRSPAFADGTRIYNLDETATSTVQKNPRVLAPKGKRNICKVSSGEKGTLVTTCNIISAGGIALPPALVFPRKNINPRMKVGTPPGSLILASPTGWMNTETFVEVMKHFVERSGSTKDSPTVLIMDNHESHLSIAALDLAKESGVTVLTLHPHTSAKLQPLDVGIHGPFKSYFASAMESWMMRNPGCPVTIYEIGTLVGQAFEKSMTPVNIKNSFKKTGIYPFDRNIFSEEDFMPSSVTDRPTVAEPTAFVVDRNENLTVTIQEAENEMSNRDVDTPSPSLIDAIQSFVQSPLHSASAASVPDTLPSEVCARIPISLSHLCLEAIIAPINAIPAVQSEDNHPLYLDTSSPPSAARHTDETSAKSSYAQIDLSTRLVTPEEFRKPLKAAARNNKRKPRRLGKSLIATDTPENNEIEKNKKAIKRKKVPQSKGKKAVKKVLQSDSEEDCDIILDDDSPDEGSWLSDEADTVNIITQETLKKPLPRMPREGEYVLVEFTSKKQLLYYVAKVLEFIYLFIYLCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334769;
- 90% Identity
- iTF_00682306; iTF_00682307; iTF_01334704; iTF_01334705; iTF_01334707; iTF_00681590; iTF_00682308; iTF_00404741; iTF_00682309; iTF_01282183; iTF_01334701; iTF_00683247; iTF_01334703; iTF_01334767; iTF_00683248; iTF_01334768; iTF_00683249; iTF_01334706; iTF_01334739; iTF_01334708; iTF_01334709; iTF_01334710; iTF_01334711; iTF_01334712;
- 80% Identity
- -