Emi033168.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000313.1:1503584-1505695[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-11 2.4e-08 35.8 0.1 2 41 10 49 9 52 0.90
Sequence Information
- Coding Sequence
- ATGCCTCCACGTCGAGCTCCGTGGACTCAAGAAAACTTGCGTTCTGCTATGGCAGCCGTACAACGAGGGCAGTTGACGCAGCGTGGTGCAGCAGAGCGATATAATATACCTAGACGTACGCTAAGGAACCACTTGAAAAGTGGAAATACAATGCGATGTTTAGGACGCCGTTCAATTATGACTGAAGCTCAAGAATGTGATCTTGTCAACAGAATCATAAGATTTGCAAATATAGGGATGCCACTTACTCCAAAGCTTATTCGCAGACAAGCATTCATCTTTTGTGAAAAATATGAGCTAAAACATAACTTCAACGCAGACATTGGCCTTGCTGGCAAAGACTGGCTAAAGATGTTTTTGAAACGGCATCCAGAAATTTCAAAGAGAAAGGCACAGTTCATGAATCCAGCTAGGGCGCAAAAGCTAAACAGACCAATCGTTAGCCAACACTTCTCAGAAATCAAAAAAAATTATGACGAGCTTGAAATTATAACACACCCGCAAAGACTTTACAACATAGATGAAAAGGGATGTCGGTTGACTGTTCATAGTCAACAGACTGTTCTAGCACAAAGAGGAGCTCGACGAGTCCATTTAATAGCGCCAGAGCATGCTCAAAATGTCACGATCGCAATGTGTGTCAATGCTGTCGGGACCGCTATTCCACCGATGATAATATTTAAAGGACAGAGGCAGAAACCTGAATTCAGTGACAATTTATCCACGGGGAGTTTCGTGAAGATGTCAGCAAAAGGGAGCATGACAACTGAACTATTCGTGGAGTTCATTAAACATTTGGCAAAATATAAGACTCAAGGAAAAATTTTGTTGATCTTCGATGGAGCGTCATCGCACTTAGATTACACGATCGTTGAGGAAGCAGACCGGCATGACATAGTCCTTTATTGTCTCCCGAGTAATACTACGCACGAGCTGCAACCTCTGGACAAATCTGTGAATAAGTCGTTTGAACATTATTGGGATCAAGAGGTTTTAAGATACATGTACCAAAATCCTGAAAGACGCATAACGAAAGCCAGTTTTAATACAATTTTCACAAAGGTGTGGTCACAGTGTTTGACTCACGACAATATAGTAAACGGTTTTCGAGCTACGGGCTTGTACCCTTTCAACCCTGACATATTACCTGACGAGGCATTTGCTCCATCAATTTTAACAGAGCTGCCTCCACCAACAGAATCCAGCGCTTTAGTAGGCTCAGACACAGGTCATTCAGATAATTATACTGTCAATCAGCCAGAAGAACAGCTTCGAAACGAGCATGATTCTCAATCTCATTTAGAGCAAGTTCCTGATTTACCCGAGAAAAGTCCTGCTCAAAGCGCCATGGATCTAAATAATTTGTCGGTCTTAACTAACCAAGAGCATGAAGACACTATTCAATCATCTGAAAAGATCTTGAATAATGTAGAAACAACACCAAAGAAGGCACAAATCATTGTTACTCCGACCCAGTCACCAAAACCATCCACTTCAGGACTTCACAGGGCTCCTATATATCGTCGTCCAATAATTTACAGCTCAGGATCCGAGACAGACTCTGAAACAAATATTGAATTGCAGATAACACAACTGGCATTAAACAAATCATCACTGGCCATGGATAATATATATGGTTCTGAAGAAAATATCGAAGACAGCGATGATTTTGGTTCTGATGACAACGTACCTTTGGCGAACCTCAAAGACAATAAATTTAGGTCTCCTTTTCAAGAACTACTGCCAACGCCAAACTACGCTGTGACAAAGAATAAACCTAGGAGAAAAGCTATCAATTATAAAGGCCAACGAGTCACCAAAGATCTGTTTAAGGAACAAGAAACATTGAAAGAAAATAAGTTGACAAACAAAAGAAAACCCAAAGAATCAGAGAAGAAGACTGAAAATGAAAAAAAGAAACGATCTAAAGGGGATAAAAGAAAAAGAAGCAATCTATCGGTAGAGGAATCTTGGTTCTGCCCAGCTTGCAATGAAAATCGTGTATCTGATATGAGACAGTGTGTTAAATGCAGAATATGGTACCACGAAGAATGCCTAGGGCTAACCAAAAATGATAAAGATTTTTTTTACTGTCAAAACTGTGATGAATAA
- Protein Sequence
- MPPRRAPWTQENLRSAMAAVQRGQLTQRGAAERYNIPRRTLRNHLKSGNTMRCLGRRSIMTEAQECDLVNRIIRFANIGMPLTPKLIRRQAFIFCEKYELKHNFNADIGLAGKDWLKMFLKRHPEISKRKAQFMNPARAQKLNRPIVSQHFSEIKKNYDELEIITHPQRLYNIDEKGCRLTVHSQQTVLAQRGARRVHLIAPEHAQNVTIAMCVNAVGTAIPPMIIFKGQRQKPEFSDNLSTGSFVKMSAKGSMTTELFVEFIKHLAKYKTQGKILLIFDGASSHLDYTIVEEADRHDIVLYCLPSNTTHELQPLDKSVNKSFEHYWDQEVLRYMYQNPERRITKASFNTIFTKVWSQCLTHDNIVNGFRATGLYPFNPDILPDEAFAPSILTELPPPTESSALVGSDTGHSDNYTVNQPEEQLRNEHDSQSHLEQVPDLPEKSPAQSAMDLNNLSVLTNQEHEDTIQSSEKILNNVETTPKKAQIIVTPTQSPKPSTSGLHRAPIYRRPIIYSSGSETDSETNIELQITQLALNKSSLAMDNIYGSEENIEDSDDFGSDDNVPLANLKDNKFRSPFQELLPTPNYAVTKNKPRRKAINYKGQRVTKDLFKEQETLKENKLTNKRKPKESEKKTENEKKKRSKGDKRKRSNLSVEESWFCPACNENRVSDMRQCVKCRIWYHEECLGLTKNDKDFFYCQNCDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276240;
- 90% Identity
- iTF_01264354;
- 80% Identity
- -