Epri054095.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010229165.1:1607-5351[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.8e-117 8.6e-112 375.6 29.6 1 300 1 299 1 299 0.97 2 3 0.0025 2.2e+02 3.2 2.8 122 171 299 348 297 352 0.92 3 3 0.05 4.4e+03 -1.1 5.4 135 236 333 371 319 374 0.50
Sequence Information
- Coding Sequence
- gCAGAAGCAAGATTGGCAGCCAGACGACAAGCGAGAGCTGAGGCGAGAGAAATTCGAATGCGTGAATTGGAGAGGCAGCAAAAAGAAGCCGAAGAAAACGCAGACAGGGTGTATGATATGTGCACAGcTGACAGCTCTCGCACGATGAGAGTAACACCAGATCCTATTAGAACTTCCCGTCTTCTtgcaaattcaaataattttcagtcTAGTCGGAGATCATCTGAAGATTCTTTGGAGGATGCTGGTCTTGGCAGAGATCCCAGAATAGAActtaaagaatttgaagaaaaattcagaaaagcaATGATCGCTAATGCACAATTAGACAATGAAAAATCGTCCTACGCTTATCAAGTTGATTTACTAAAAGACAAATTAGAAGAGTTGGAAGAAACAGCTGCCCAATTGCGGCGAGAATTGCGGGAAAAAAATCGAGAGGCAGAGCAATTGAAACGTATCAGTCAAAGATTGAAAGAAGATTTAGATATATGCAGAACTCAATTAATAGAAAGGGATTCTTTAATACAGgaaaatggtTTAGTAATAGTAGAAGATGAAGGAAGTGACGGTGATGGAACAGAAGGAGAAAATGGTATTTGTTCGAGAAAAAGAGTACTAGTCAGTACAGAGGCAGCAGAAGTACTGCAAAACGCAGGAGAAGGCTCTTTAGatgtaCGACTGAGAAAGTTTGCATCGGAAAAAAAGGAATTACAAGATGAAATTCGTCATTTAAGGTTAGAATTAGAAGAAGCCCGAAATCGTATAAGGCCGGAAAGATCTGCGGGGTTGGTATTAGgtGGGTTATCTGATTCGGAAGATGTTCAACGAGAAGCTAATAAATTgatcgctgattacaaatttaaacttcaaaaggCAGAACAAGATATGTCAACATTGCAAGCGACAGTTGCTAGGCTAGAGAGTCAAGTGATTCGTTACAAGTCGGCTGCAGAAGCATCTGAAAAAGCAGAAGACGAACTAAAAgtagaaaagagaaaattgcAAAGAGAATTCCGAGAATCCCAAGGTCGGGTGGAAGAATTGGAAACTGCCAACACTCATTTGCAACGAAGATTAGATAAGCTAAAGAATGCAAGATCCACTCTTTTAAAGGAGATTTGA
- Protein Sequence
- AEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADSSRTMRVTPDPIRTSRLLANSNNFQSSRRSSEDSLEDAGLGRDPRIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRISQRLKEDLDICRTQLIERDSLIQENGLVIVEDEGSDGDGTEGENGICSRKRVLVSTEAAEVLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRIRPERSAGLVLGGLSDSEDVQREANKLIADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREFRESQGRVEELETANTHLQRRLDKLKNARSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00460519;
- 80% Identity
- -