Epru005976.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- retn
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000004.1:3261047-3274736[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-20 1.8e-16 61.1 0.0 14 89 91 164 87 164 0.94
Sequence Information
- Coding Sequence
- ATGCCTGGGTTGCCGGGTTGCGCGTATATCAACAATAATTGCAGGGCCAATAATAAAGCCGGAGGGACCACGCTCGATAGCCCGAAATTGCCGGTTCCCCTACCCCAGCCTGCAACGTTTTATTGCCTCTACTCTCGAGAGCAGGAATGGCGGCAGCCCCCTTCGTCCTTCTCGATGGCGGATAAACGATCCTGCGATACGATGCCACCGCTAGCCGTGCCCAACTTCCCTCCGTCAATTCGCTCGCGTGAACCTTCCGCCGGATTAATATCCGCCAGACGAACCCCGATCAATCGACTGCCGATCATGGCGAAATCGGTGCTGGATCTCTACGAGCTGTACAATTTGGTGATCGCCAGGGGCGGCCTGGTGGACGTGATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAGTACATGAAATACCTGTATCCATACGAGTGCGAGAAGAGACGGCTGTCGACGCCGGCGGAGTTGCAGGCGGCGATCGACGGAAATCGACGGGAGGGACGTCGAAGCAGCTACGGGGCGTACGCGGCGAGCGGAGGCGCGGCGGGCGATAGCCTGGTGCAGAGGAATCCCCACACGCCTAGCTCGCTCGCGTTGCACGCCCAAATGTCCCCGTTGTCGCTGGTGACAGCGGTGGCCGCCGGTGGCCAACACCACGGCCCGCAATCCTTGGTGAACGGAAGTGCCGCGCACACACCCTTGCCCCACCATCCGCAACATCCTCAACACCCTCAGGGACTTCCGGGACAGCCACCTAACGCAGGACCTATTCCCGGGATGGCGCCATCCGAGTTCGAGGCACGCATGGTCGAGTACGTGAAGCTGCTGAACAAGGAATTGAGGAGCGCTGGCGCCGGCACGCCACCGCCGATGATCCATCGACAGGGAAGCGCGTCGCCTCCGTCCTCGACGCCGCCCAGGGATGGAGCGTTCAGCGCCCTCGAGATGTCCCGGCTCACCTTGTGGAACATGTACAACAATAACACCCTGTATCCGGGTGTCGGCCATCAGCCTCCCATGTCTCCTCAGGCCTCGCATTCTCCAGTACCTCCGGCGTCCAGCCCCGAACCTCAGAGAGAAGCTCTCGATCTTGGACTCAGGTCGTCGCCAATATCTTCGTCGCCCGCGAGGCAAAGTTCACCCTCCTCGGGAGGTAGCATGCAAGTGAAGAGGGATCAAGATCTGACCGGGACCCCGGGACCTCCGCCGGCGAAAAGGTTGCTCTCGGATGACGATAGTCCAATCGAGAAGAACGCTACAGCCTCTGTGGGCACgcacattaaaatttccaatcgaGGAGATGGAAGGAACGGTGACAATTCGTTAGTAGTGAGTATGGAGCTGAACGGAGTGATGTACCAAGGTGTTCTGTTCGCCCAGAGCGACAGTAGGACCGCCGCGAGCAGTACAACGACGAGCAACAACAGCAACGCGAAAGCGTCGCGGAGCGTGGTCTCGTGA
- Protein Sequence
- MPGLPGCAYINNNCRANNKAGGTTLDSPKLPVPLPQPATFYCLYSREQEWRQPPSSFSMADKRSCDTMPPLAVPNFPPSIRSREPSAGLISARRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAASGGAAGDSLVQRNPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPQHPQHPQGLPGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDGAFSALEMSRLTLWNMYNNNTLYPGVGHQPPMSPQASHSPVPPASSPEPQREALDLGLRSSPISSSPARQSSPSSGGSMQVKRDQDLTGTPGPPPAKRLLSDDDSPIEKNATASVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQSDSRTAASSTTTSNNSNAKASRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00360003;
- 80% Identity
- -