Etag008613.1
Basic Information
- Insect
- Erynnis tages
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905147235.1
- Location
- LR990074.1:1432575-1448952[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-80 7.8e-76 255.3 28.3 1 297 134 422 134 424 0.89 2 2 1 1.8e+04 -8.6 17.3 1 44 421 464 421 494 0.69
Sequence Information
- Coding Sequence
- ATGGGGTGGCGGTCGAAATTGGTAACGTCGGACAACAGCGAAGAAGAAAGCGGGGATGCGTTCACCGACGGTGATTTCGGCGACTCCGAAGAAGAAACTATAATCGAACAAACAGAAAATACCAAAAAAGGTCGGCTGCCCGTCAACGAAACGGTAAACACAGAAGTCAAGCCGGGTCTCGACACCTGCGACAACGTCAACGGGAATCTATCGACGGAATGTGTCAATGGATACAACAATACAGGTGGTGTTAATGGACTTAGAAATGGAAGTATAACAGAATCAAGTTGCTCGTCCAAAGATAGCTTAACAAATGGAGATCACATCGCGACTGATACACGACGAGATTCACATGGTGATCCATCAATAGTTGGAATTCTTGGTGATCAGCATAACCATGCGGAGCAGCGGCTGGCGGCGCGTCGGGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGGGAGCTCGAGCGCCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCGTACGACATGTACGCGGGAGATTTCAAAAGAGACACAGTGTCGCGCAGCGGGCGCACGAGACTGGCCGCGCTCAGCCCCGGCGGACTGCACTCGCCGAGGCGGAGTTCCGAGGATTCTGCGGACGACATCATCAGTATGAAGGATCTGAGGCACGAGTTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGCCTACCAGCTCGAGCTGCTCAAGGACCGCATCGAGGAGCTGCACGAGGAGTATGCGCAGCTGCAGCGGGAACACAGAGAGAAATGTTCAGCGCACGAGCGTCTCAAACGCGAGCACGCGACCCTAGAGCGCGAAGTGGCCGCCGCGCGCGACGCAATAAGAGCTCGAGACGCCGCCGCAGCAGCCGCGGGATTCGCATTCGTGGAGGCGGCGGCTCAGCCTGACGCCACCGCCGGAGGGAGCTTCGGGGCGGTGCCGTCGCTAGCGCTGGTGTCACACAGCTCGGAGCAGCTGCTGAATGATGCGGGAGAAGGCACGCTAGACGTGCGGTTGCAGAAGCTAGTCAGTTCGAAGCAGGAGCTGGAGTCGGAGGTGCGCAAGCTCAAGCTGCGACTGAACGAAGAGCGCGCGGCGAGACAGAACGGCGTCGCTTCACACCACGACCGCGACCGTGAGAATGAGTTGGAGGCCCTCCGCAAGTCGCTGTCGGAGGCGAAGAGCCGCGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCGGCGGCGGCGCGCCTCGAGGCGGCCGTGGCGCGGCTGAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCTCGAGCGCCGCCGCCTGCAGCGGGAGGCACGAGAAGCGCTGAACCGAGTGGAGGAGCTGGAAACAGAGAACAGTCACCTGACCAAGCGGCTCGACAAACTGAAAAACGCCAAGTCGGCGCTGCTGAAGGACCTGTGA
- Protein Sequence
- MGWRSKLVTSDNSEEESGDAFTDGDFGDSEEETIIEQTENTKKGRLPVNETVNTEVKPGLDTCDNVNGNLSTECVNGYNNTGGVNGLRNGSITESSCSSKDSLTNGDHIATDTRRDSHGDPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGDFKRDTVSRSGRTRLAALSPGGLHSPRRSSEDSADDIISMKDLRHELKEVEEKFRKAMILNAQLDNDKAALAYQLELLKDRIEELHEEYAQLQREHREKCSAHERLKREHATLEREVAAARDAIRARDAAAAAAGFAFVEAAAQPDATAGGSFGAVPSLALVSHSSEQLLNDAGEGTLDVRLQKLVSSKQELESEVRKLKLRLNEERAARQNGVASHHDRDRENELEALRKSLSEAKSRAARAEAEAALQAAAAARLEAAVARLKARQDHQDEHEEQLKLERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01082458;
- 90% Identity
- -
- 80% Identity
- -