Eten019658.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993124.1:108622292-108623785[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 4 2.7e+04 -4.1 0.0 26 31 85 90 82 102 0.79 2 8 0.17 1.2e+03 0.3 0.1 22 43 216 237 210 242 0.81 3 8 0.0024 16 6.3 0.1 21 49 243 270 236 275 0.84 4 8 0.0031 21 5.9 0.6 21 45 298 322 277 325 0.87 5 8 0.00032 2.2 9.1 0.1 21 45 326 350 322 359 0.89 6 8 0.012 79 4.1 0.1 18 47 378 408 368 414 0.81 7 8 0.0013 8.6 7.2 0.1 23 46 440 463 436 469 0.87 8 8 0.0038 26 5.6 0.1 21 48 466 493 463 495 0.89
Sequence Information
- Coding Sequence
- ATGGCTGGTCAGATGACACAAATGGAATTCTCAGATATGGTCAAGGACGGTACTTGTACATTCTCGGATTGGCCAGATGAGGACGACGAAGATGATGAGCAATACACTGGCATTCTCCTGACGGAGGATATGATCAAGCAAGAGCCAGAGTTCATAATAGGATCGGATGATGCTGAAGAGGAGCAAAAGATCCGTGCCTTCCTAAATAAGGACACCATCGATGATGAGGAAAGGCAACAGTTGAATTGGTTCACATGTATGATTTGTGATGAACGCTTTTTGTCCACCAAAGAATTGTCGCTGCACGTACAAGAGCACACCAAAACAGCACTCAAAGCCGAAAAGGATGTTATGTTGGCTCCACCGAGGGAGCTCAGCAATCGTCAGGCCCCGAAGACACCTTACACCGGATTTACCCGACAGGAGCTCTTTCAGGATTACATTAATATCAGCGTGGAACTGGACGGAAAGCCCACATACACGTGCAAGCTGTGCCCCAACAAGGTATATGCGCGACAAATTTCAATCAGAAATCACATGCGTATCCATGAGAATCCAACGTATAAGGAACGCTCATGTCACGTCTGTCACAAGACTTTCCTGCGACGCGATACGCTCCTGGTACATTTGCGCACCCACACCAATGAGCGAAAGTACCAGTGCGACATTTGCGATGCAGCCTTCACACATTCCAGTTCGCTGGTGTCCCACAAGCGCATACACAGCGGTGAGAGGCCGTACGCCTGTGATATCTGCGACAAGTCATTCCGCGAATCTGGCCAGTTAACAGCACACAAGAGGATTCACTTTGAGAAGGTCTTGGAGTGCCCAAAATGCGACAAAAAGTTCACTTCCAACAAAACTCTACGGGTGCACTGTCGAACGCACACCGACGAGCGCCCTTACACATGCTCCTTCTGTTCAAAGATGTTTCGCTGCACCACCAGCCTCACCACTCATTTGCGGGTCCATACAGGTGAGAAGCCGTACAAATGCGAGATATGCTCATACGCTACCAAGCAGTCGGGGTACCTCCGCACTCATATGCGCACCCACACCGGCGAGAGACCTTTCAAGTGCACCTACTGCGATAAAGCGTTCTCCGAGAAAAAACGGCTTGTCACCCACACCCGGAGCCACACCGGGGAACGCCCTTACAAATGTATTTACTGCGATTCGGCATTCGCGCGGACAGACAACCTCAAATATCACCTGCGAACGCATACCGGCGAAAAACCGTATGAATGCGGCGAGTGCGGTAAGCGATTTGCACAAGGCACGACACTCAGTATCCATCAGAAGATTCACACGGGAGTTAAGCCATATTCTTGCCCGCATTGCGCCATGAAATTTCGACAAAGTGGCACGTTGGTCACTCACCTGCTGATGCACACTAACGAGCGGCCCTTCAAATGCGATCTCTGCGAGCGGGGATTCCGACAGAAAGTGTTGCTAAAACGACACGTTTCCAATGCCCATGGTAGTGTGATTTGA
- Protein Sequence
- MAGQMTQMEFSDMVKDGTCTFSDWPDEDDEDDEQYTGILLTEDMIKQEPEFIIGSDDAEEEQKIRAFLNKDTIDDEERQQLNWFTCMICDERFLSTKELSLHVQEHTKTALKAEKDVMLAPPRELSNRQAPKTPYTGFTRQELFQDYINISVELDGKPTYTCKLCPNKVYARQISIRNHMRIHENPTYKERSCHVCHKTFLRRDTLLVHLRTHTNERKYQCDICDAAFTHSSSLVSHKRIHSGERPYACDICDKSFRESGQLTAHKRIHFEKVLECPKCDKKFTSNKTLRVHCRTHTDERPYTCSFCSKMFRCTTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPFKCTYCDKAFSEKKRLVTHTRSHTGERPYKCIYCDSAFARTDNLKYHLRTHTGEKPYECGECGKRFAQGTTLSIHQKIHTGVKPYSCPHCAMKFRQSGTLVTHLLMHTNERPFKCDLCERGFRQKVLLKRHVSNAHGSVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01395957;
- 90% Identity
- iTF_00672345;
- 80% Identity
- iTF_00672975;