Basic Information

Insect: Eristalis tenax
Gene Symbol: -
Assembly: GCA_905231855.1
Location: HG993124.1:108622292-108623785[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.025 3.7 8.8 0.3 1 23 84 106 84 106 0.96

2 13 0.00063 0.096 13.8 0.4 1 23 160 183 160 183 0.98

3 13 0.00031 0.047 14.7 5.1 2 23 192 213 192 213 0.97

4 13 6.3e-07 9.6e-05 23.2 0.7 1 23 219 241 219 241 0.99

5 13 2.2e-07 3.3e-05 24.6 0.2 1 23 247 269 247 269 0.98

6 13 2.1e-05 0.0031 18.4 4.1 2 23 275 296 274 296 0.96

7 13 0.0054 0.83 10.8 5.5 1 23 302 324 302 324 0.99

8 13 8.6e-07 0.00013 22.8 1.4 1 23 330 352 330 352 0.99

9 13 6.1e-06 0.00094 20.1 2.8 1 23 358 380 358 380 0.99

10 13 5.9e-05 0.009 17.0 1.1 1 23 386 408 386 408 0.98

11 13 6.9e-06 0.0011 19.9 0.2 1 23 414 436 414 436 0.98

12 13 2.6e-05 0.004 18.1 1.0 1 23 442 464 442 464 0.98

13 13 1.3e-05 0.0019 19.1 0.6 1 23 470 493 470 493 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.025	3.7	8.8	0.3	1	23	84	106	84	106	0.96
2	13	0.00063	0.096	13.8	0.4	1	23	160	183	160	183	0.98
3	13	0.00031	0.047	14.7	5.1	2	23	192	213	192	213	0.97
4	13	6.3e-07	9.6e-05	23.2	0.7	1	23	219	241	219	241	0.99
5	13	2.2e-07	3.3e-05	24.6	0.2	1	23	247	269	247	269	0.98
6	13	2.1e-05	0.0031	18.4	4.1	2	23	275	296	274	296	0.96
7	13	0.0054	0.83	10.8	5.5	1	23	302	324	302	324	0.99
8	13	8.6e-07	0.00013	22.8	1.4	1	23	330	352	330	352	0.99
9	13	6.1e-06	0.00094	20.1	2.8	1	23	358	380	358	380	0.99
10	13	5.9e-05	0.009	17.0	1.1	1	23	386	408	386	408	0.98
11	13	6.9e-06	0.0011	19.9	0.2	1	23	414	436	414	436	0.98
12	13	2.6e-05	0.004	18.1	1.0	1	23	442	464	442	464	0.98
13	13	1.3e-05	0.0019	19.1	0.6	1	23	470	493	470	493	0.95

Sequence Information

Coding Sequence: ATGGCTGGTCAGATGACACAAATGGAATTCTCAGATATGGTCAAGGACGGTACTTGTACATTCTCGGATTGGCCAGATGAGGACGACGAAGATGATGAGCAATACACTGGCATTCTCCTGACGGAGGATATGATCAAGCAAGAGCCAGAGTTCATAATAGGATCGGATGATGCTGAAGAGGAGCAAAAGATCCGTGCCTTCCTAAATAAGGACACCATCGATGATGAGGAAAGGCAACAGTTGAATTGGTTCACATGTATGATTTGTGATGAACGCTTTTTGTCCACCAAAGAATTGTCGCTGCACGTACAAGAGCACACCAAAACAGCACTCAAAGCCGAAAAGGATGTTATGTTGGCTCCACCGAGGGAGCTCAGCAATCGTCAGGCCCCGAAGACACCTTACACCGGATTTACCCGACAGGAGCTCTTTCAGGATTACATTAATATCAGCGTGGAACTGGACGGAAAGCCCACATACACGTGCAAGCTGTGCCCCAACAAGGTATATGCGCGACAAATTTCAATCAGAAATCACATGCGTATCCATGAGAATCCAACGTATAAGGAACGCTCATGTCACGTCTGTCACAAGACTTTCCTGCGACGCGATACGCTCCTGGTACATTTGCGCACCCACACCAATGAGCGAAAGTACCAGTGCGACATTTGCGATGCAGCCTTCACACATTCCAGTTCGCTGGTGTCCCACAAGCGCATACACAGCGGTGAGAGGCCGTACGCCTGTGATATCTGCGACAAGTCATTCCGCGAATCTGGCCAGTTAACAGCACACAAGAGGATTCACTTTGAGAAGGTCTTGGAGTGCCCAAAATGCGACAAAAAGTTCACTTCCAACAAAACTCTACGGGTGCACTGTCGAACGCACACCGACGAGCGCCCTTACACATGCTCCTTCTGTTCAAAGATGTTTCGCTGCACCACCAGCCTCACCACTCATTTGCGGGTCCATACAGGTGAGAAGCCGTACAAATGCGAGATATGCTCATACGCTACCAAGCAGTCGGGGTACCTCCGCACTCATATGCGCACCCACACCGGCGAGAGACCTTTCAAGTGCACCTACTGCGATAAAGCGTTCTCCGAGAAAAAACGGCTTGTCACCCACACCCGGAGCCACACCGGGGAACGCCCTTACAAATGTATTTACTGCGATTCGGCATTCGCGCGGACAGACAACCTCAAATATCACCTGCGAACGCATACCGGCGAAAAACCGTATGAATGCGGCGAGTGCGGTAAGCGATTTGCACAAGGCACGACACTCAGTATCCATCAGAAGATTCACACGGGAGTTAAGCCATATTCTTGCCCGCATTGCGCCATGAAATTTCGACAAAGTGGCACGTTGGTCACTCACCTGCTGATGCACACTAACGAGCGGCCCTTCAAATGCGATCTCTGCGAGCGGGGATTCCGACAGAAAGTGTTGCTAAAACGACACGTTTCCAATGCCCATGGTAGTGTGATTTGA
Protein Sequence: MAGQMTQMEFSDMVKDGTCTFSDWPDEDDEDDEQYTGILLTEDMIKQEPEFIIGSDDAEEEQKIRAFLNKDTIDDEERQQLNWFTCMICDERFLSTKELSLHVQEHTKTALKAEKDVMLAPPRELSNRQAPKTPYTGFTRQELFQDYINISVELDGKPTYTCKLCPNKVYARQISIRNHMRIHENPTYKERSCHVCHKTFLRRDTLLVHLRTHTNERKYQCDICDAAFTHSSSLVSHKRIHSGERPYACDICDKSFRESGQLTAHKRIHFEKVLECPKCDKKFTSNKTLRVHCRTHTDERPYTCSFCSKMFRCTTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPFKCTYCDKAFSEKKRLVTHTRSHTGERPYKCIYCDSAFARTDNLKYHLRTHTGEKPYECGECGKRFAQGTTLSIHQKIHTGVKPYSCPHCAMKFRQSGTLVTHLLMHTNERPFKCDLCERGFRQKVLLKRHVSNAHGSVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395957;
90% Identity: iTF_00672345;
80% Identity: iTF_00673158;