Basic Information

Gene Symbol
hang
Assembly
GCA_949752695.1
Location
OX456985.1:50465184-50476950[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.046 12 8.4 1.3 3 23 248 269 247 269 0.93
2 17 0.018 4.7 9.7 2.7 1 23 441 464 441 464 0.91
3 17 0.0017 0.44 13.0 1.7 2 23 575 597 574 597 0.95
4 17 0.0048 1.2 11.6 0.2 1 23 605 628 605 628 0.95
5 17 3.2e-05 0.0083 18.4 0.1 2 23 725 746 724 746 0.97
6 17 2.2e-05 0.0058 18.9 2.5 2 23 795 817 794 817 0.96
7 17 0.0032 0.83 12.1 0.2 2 23 826 848 825 848 0.95
8 17 0.0012 0.31 13.5 0.2 1 23 861 884 861 884 0.97
9 17 0.00036 0.093 15.1 1.0 1 23 912 934 912 934 0.99
10 17 0.0015 0.4 13.1 0.9 1 23 942 965 942 965 0.96
11 17 0.0047 1.2 11.6 0.1 2 21 973 992 972 993 0.92
12 17 0.00022 0.057 15.8 0.4 3 23 1050 1070 1049 1070 0.98
13 17 9.2e-06 0.0024 20.1 0.1 1 23 1105 1127 1105 1127 0.98
14 17 7.2e-05 0.019 17.3 0.2 2 23 1153 1175 1152 1175 0.93
15 17 0.13 34 7.0 0.3 2 19 1195 1212 1194 1214 0.93
16 17 0.0045 1.2 11.6 0.6 3 23 1230 1250 1230 1250 0.98
17 17 0.00059 0.15 14.4 0.3 1 23 1377 1399 1377 1399 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTGCGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCAATTTTTAACAGCTACGCGGCTGATAAGGAGCCCCTAGCTACCAAAATTCAATCTTGTGTTAATATTAAGGTTTCACCGATTGATAGACTATCTCTGAGAATATGTCATGCTTGTATCAGTTACCTGAATTCGTGGCAGAGTTTCAAAAATCGATGTGTTGCTTCTCAAAACAAGCAACGAAGCTGGTTggatattacaaaaaaatatgaaaagaaacaaataagcTCAGTTGCTCCACTCGCTGCTGTTGGAGGAGTGGGGGTATCCCATGGAGATGGTGGTGGTGATGAGCTCAAGAACAGCCCACTTGCTTCATCGATTTTGGAGGGAATTTCATCGCTCAAGAAAAGGCGTTCCCTAACGGTATATccCATTCCAGTGCACATTAAAGATGAACCGATGGACGAAGAAGATTATGATCTAAAACACGACGAATCAGATATTGATCCAACCCTTTTCTTGGAACGAACCGAAGAAGAAGGTTCTGATAACTTGTCACAAAAAGAACAACACTTGGCTTCATTAGGCCTAAAACAAGCATCAGGCAATGCACATCCCTTGAGTTACTTGGCCGACTATAGTTTTGAAGGCGAAAATACTCAAACGCGAGTAGAGAAACCCGCCGAAATCGCTATAACATCAAGTGAAGTGAAAGAAGCATCATGTCGGGCATGCAACTTAAAGTTTTCAACAAGAGCAAATGCCCGTCGTCACGAACGAAATCTTCATCCACAATTGTTTTTAGTGCCTAACAGCACGCCAATTAAGGGACTCAATATTGTGTCGCCAATGGGTCAAGCGATCAAATCCAGTTCAGCATTGGCTACAACAATACGACCAGCCATCAAACAAGAACAACTTGGCTTATTCGATTATGATCAACCGGAAAAATATCAACATCTTCTAACTGATGACAAAATATTGTTCATGCAACGCCAAGAAGATTTTCTACAACAATACCAAAACATGACTTGTAATTGTTGCCTTCGCACTCATCTTACCTACAAAAACTTTATGGCACACATGCGAAAGAAATTCCATTCACTGCCACGCAATCTTTGCTTCAAGTGTCTAAagcaaaatgattcaaaagctcttttcatttcGCATTTAAAGAAACGAAATTGCATAAACTTGTACAAGATCTATCACAGTTTGATTGATGCAGGTGTTTTGAAGAAAGACATAGCTAGCTGCTCCCCAGACAAGCTGCGTGCCAAAGAACTTTTGGTCAATAAAATTTATGAATGTAAGATATGTTCTAAGCATTTCCGACTTAAATTAGAATTCCGCAGTCATGTTTATGAGGAGCATGCTGATTATCAGAAGAAAGACGTCTCGCCTGGTCACTGCGGATTCTGTGGATTGGAAATCGAAGATCCATTTGAAAGGAAGCGCCACTATAACAATATGGATTGCATTGTAATACTGCGATGTATAACTTGCGAAGAAAAGTTTGATAACCACCAGAAATTCCTTGATCACGTGTATTCTAAACACTTGGCTAACAACAACGAAGCTCAAAAAAGCAACCTCATGAAAGAGCTACCTCCACCACCATCCGCTACTACCTCAACAGAGAGTTCTCCTTCAAAGAAATCCGAGACTCCTGCAAAGCCGCAGTTCTTTTCACGCCTACCTCAAAGTTGCAATATATGCGGCCAACACTACAACAACTACAATAATGTTTTGAGGCATATGGAGTCGAAGCATCCAGATCAGTTGCCACAAACGTATAAATGCACACGCTGTTTCATTGGCTATCCGCGACTGATGAATCTTCGTGAACATATGATTGAAGCACATGGCATGAAAGTCGATAAAGTGCGTAACAATAGCTTTGACTACATTGTAGACTCACCAACAGTACAAGGAAGTTTACCTCGAGGAGCAGAAAAGATGGCTCCCGATGCGTATACTGGACGCTATGATTATGTTATGAAAGATTTGATGTCAATTACCAATGGCGGAACAGGAGGCAATGAAGTTCCAGGTGAAAATGAAGAGGACGAGAATCAACCAGATTCGCCAACTCCAAAGAAAATAAGGCTTGACAGTGGCGCAGTAGTAGCTGTCGGCACTGCAAGTCTGAAGGAATGTCCCATTTGTAGTGCAGTTTTCAACAACAACATTGGACTTTCGAATCATATGCGAACCCATACTACAGAAGAGGGAAGTGCAGGAGGAGGAGGAGCAGAAGAAGAGGTACCCGAAGAGGATGAAgaaccaactccgaaaaaaccAATTGATCCTCttttcaagagaagcttggaaTTGGCAGCAGATCGCCGTTTCCGTCGaatgcgttgccgcatttgtcAAAAACGATTCTCTTCAAAAAAGAGTTATCGTCGACACATGTTGATCGATCATCAAATCCGCAATGTGCAGTTTATAAAATGCAAACTCTGCGATGCTGAATTCGCCTACGAAAAAGGTCTTAAAGTACACATGTTCAAAATCCACAACACTCTGTTGAAGGACGAAATGATAGTCAAACAGTTTGAGTGCGATATCTGCTCGATTGTATATCGAACAGAAGAGCAGTTACTTCTACACAAGAAATCTGTTCACGGCAATGAAAGTGCCGCTGCAGAGGAGGAACTGCCACCGTCAATTGAGCAAAACACGGAATCAGCTGCACCAATTTTCTGGTATCAATGCCGATATTGCCCGTCTAAtttcaacacaaacaaaaaattggCCATTCATATAAATTCACATTATGAATTTGATTCGAACGACTACTCTTGCAAAGATTGTGGAAATGTCTACAGTGGTCGCAAGAGTCTTTGGGTGCATCGTTACAAGAAACACCCTCCCGTTGCCGACCCCTCAGAGTGTGAAATTTGCAAGAAAATATTCTTCGACAAACAAATGCTAGAGAATCACGCACAGTCTTGTGCACAGAAGCGCGCTGCTGCAAGTGCAGCTGAATCAGCTCCAAATTTTTTTCAGCACAAAACCGGCGACGATGACGAAGTTACCGACAAACCAGAAGCAGCCAATATTGCTGGAGAAAGCAGCGCCGCCTCCGttagtttaaaaattaaactgcCCGAAGTCGCATGTACcatttgtgcacagaaattcacagaCCAAGAACTCTTCACCAAACACATTCAAATGCACGAAATGGAGTTGTACACCGATAATCCGTTGGCAGCTATGTTCGACACGGGACCGGCTGATCCCAACCAATTTTACTTGGATCGAGTCAACGACAACGGACAGTATGTATGCGACATTTGTGGAAAGGCTTTTGCCCAAATGACTGCGCTGAAGGTTCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACGCCAGCCGATATAAACGCCCCCAAACAGACGACGAAACGCAAGCGCGAACTTAAATGCGATTATTGTCCGTCAACTTTCATCAGCTCAAACAACCTGCGACGTCACATAGCCGAACTACACAAGTCAGAAATATCAAACTGGCCTGAACCACCAAAAATCGAACCCGAAACGTACCTTCAATGCACCAAATGCGAACTGAAATTTGAAACGAAGAAAGAATGGATCGACCATAAAGTGAATGAAGCGAAGATTGCCAAGCCATTTGGTCCATTCCAGTGGGGCTGCGAGATTTGTGGATTGTACCTGTCTCGTCGTGAAAAGCTCATACATCACATGATGGCCCATATCAAAGAAACTAATGGTCAGATTACAGCGGAATCTGAAAACTATCCTGGCGAAAGTAATTCACAGGACTCTGAGTCGTCCAGTCGGCAGGAGCCACCTCAAAAACAACCCGTTGAAgatgaggaagaagaagaagaagaggaggaggaagaagaagaacttgaagcaGACGAGGATGATGCTGAAGAAACAGTCGATAATGAAAATTATGACGATAACGCAAACGATGGACAAAACAATGGTTCAAAACTGAGGCAACGTCTAGAACGTGAATCGAATGATGGCAGCAATGACTCAACGACGAGCTCCGAATCTGATTCTTCATCTGATGAAGACGAAGCAGAAGCTCCGCCGTCCCAGGAAGAGTTAAAGAAAAGATACGCATGCGATTTATGTCAAGTATATTTTGAAACCTCTAGCGAACTTCAAAAGCATGTCACTAGTCATTTTCTCAACGGGCCGGGTTCAGTTACACTTACCACAATAACAAAAGATAAATCGAAACCAACCAAAACTGATGTCGACcacgatgacgatgatgaagatgaagacGAAGATGATTTAACAGATACAGATCCAGTAGATTCTTAG
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLATKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDITKKYEKKQISSVAPLAAVGGVGVSHGDGGGDELKNSPLASSILEGISSLKKRRSLTVYPIPVHIKDEPMDEEDYDLKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQASGNAHPLSYLADYSFEGENTQTRVEKPAEIAITSSEVKEASCRACNLKFSTRANARRHERNLHPQLFLVPNSTPIKGLNIVSPMGQAIKSSSALATTIRPAIKQEQLGLFDYDQPEKYQHLLTDDKILFMQRQEDFLQQYQNMTCNCCLRTHLTYKNFMAHMRKKFHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDIASCSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEAQKSNLMKELPPPPSATTSTESSPSKKSETPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCFIGYPRLMNLREHMIEAHGMKVDKVRNNSFDYIVDSPTVQGSLPRGAEKMAPDAYTGRYDYVMKDLMSITNGGTGGNEVPGENEEDENQPDSPTPKKIRLDSGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHTTEEGSAGGGGAEEEVPEEDEEPTPKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRTEEQLLLHKKSVHGNESAAAEEELPPSIEQNTESAAPIFWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECEICKKIFFDKQMLENHAQSCAQKRAAASAAESAPNFFQHKTGDDDEVTDKPEAANIAGESSAASVSLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICGKAFAQMTALKVHRKWHFRGDSKQTPADINAPKQTTKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPETYLQCTKCELKFETKKEWIDHKVNEAKIAKPFGPFQWGCEICGLYLSRREKLIHHMMAHIKETNGQITAESENYPGESNSQDSESSSRQEPPQKQPVEDEEEEEEEEEEEEELEADEDDAEETVDNENYDDNANDGQNNGSKLRQRLERESNDGSNDSTTSSESDSSSDEDEAEAPPSQEELKKRYACDLCQVYFETSSELQKHVTSHFLNGPGSVTLTTITKDKSKPTKTDVDHDDDDEDEDEDDLTDTDPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-