Basic Information

Insect: Eristalis pertinax
Gene Symbol: grau
Assembly: GCA_907269125.1
Location: OU026148.1:38998993-39005025[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.034 2.8 8.4 0.5 2 23 74 96 73 96 0.93

2 22 0.013 1 9.7 0.6 6 23 105 122 105 122 0.98

3 22 1e-05 0.00082 19.5 0.3 1 23 128 150 128 150 0.98

4 22 1.8e-05 0.0014 18.8 3.6 1 23 157 179 157 179 0.99

5 22 0.19 15 6.1 0.3 2 23 432 454 431 454 0.95

6 22 0.049 3.9 7.9 0.5 6 23 463 480 462 480 0.99

7 22 0.021 1.7 9.1 4.5 1 23 486 508 486 508 0.98

8 22 2.8e-06 0.00023 21.3 1.7 1 23 516 538 516 538 0.99

9 22 1.8e-05 0.0014 18.8 0.3 2 23 545 567 544 567 0.95

10 22 2.6e-05 0.0021 18.3 0.4 3 23 575 595 574 595 0.96

11 22 0.00013 0.011 16.0 0.2 2 23 604 626 603 626 0.95

12 22 0.00037 0.03 14.6 0.1 1 23 633 656 633 656 0.94

13 22 0.0029 0.23 11.8 0.3 1 17 662 678 662 679 0.89

14 22 4 3.2e+02 1.9 0.5 2 23 887 909 886 909 0.89

15 22 1.4e-05 0.0011 19.1 1.6 1 23 941 963 941 963 0.99

16 22 0.011 0.9 10.0 6.4 1 23 971 993 971 993 0.98

17 22 3.3e-06 0.00027 21.0 0.3 1 23 1001 1024 1001 1024 0.96

18 22 0.003 0.24 11.7 0.2 3 23 1032 1052 1031 1052 0.96

19 22 3.3e-05 0.0027 17.9 0.7 2 23 1061 1083 1060 1083 0.97

20 22 0.0003 0.024 14.9 0.1 1 23 1090 1113 1090 1113 0.94

21 22 8.8e-07 7.1e-05 22.9 1.0 1 23 1119 1141 1119 1141 0.98

22 22 2.2e-05 0.0018 18.5 5.0 1 23 1147 1170 1147 1170 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.034	2.8	8.4	0.5	2	23	74	96	73	96	0.93
2	22	0.013	1	9.7	0.6	6	23	105	122	105	122	0.98
3	22	1e-05	0.00082	19.5	0.3	1	23	128	150	128	150	0.98
4	22	1.8e-05	0.0014	18.8	3.6	1	23	157	179	157	179	0.99
5	22	0.19	15	6.1	0.3	2	23	432	454	431	454	0.95
6	22	0.049	3.9	7.9	0.5	6	23	463	480	462	480	0.99
7	22	0.021	1.7	9.1	4.5	1	23	486	508	486	508	0.98
8	22	2.8e-06	0.00023	21.3	1.7	1	23	516	538	516	538	0.99
9	22	1.8e-05	0.0014	18.8	0.3	2	23	545	567	544	567	0.95
10	22	2.6e-05	0.0021	18.3	0.4	3	23	575	595	574	595	0.96
11	22	0.00013	0.011	16.0	0.2	2	23	604	626	603	626	0.95
12	22	0.00037	0.03	14.6	0.1	1	23	633	656	633	656	0.94
13	22	0.0029	0.23	11.8	0.3	1	17	662	678	662	679	0.89
14	22	4	3.2e+02	1.9	0.5	2	23	887	909	886	909	0.89
15	22	1.4e-05	0.0011	19.1	1.6	1	23	941	963	941	963	0.99
16	22	0.011	0.9	10.0	6.4	1	23	971	993	971	993	0.98
17	22	3.3e-06	0.00027	21.0	0.3	1	23	1001	1024	1001	1024	0.96
18	22	0.003	0.24	11.7	0.2	3	23	1032	1052	1031	1052	0.96
19	22	3.3e-05	0.0027	17.9	0.7	2	23	1061	1083	1060	1083	0.97
20	22	0.0003	0.024	14.9	0.1	1	23	1090	1113	1090	1113	0.94
21	22	8.8e-07	7.1e-05	22.9	1.0	1	23	1119	1141	1119	1141	0.98
22	22	2.2e-05	0.0018	18.5	5.0	1	23	1147	1170	1147	1170	0.98

Sequence Information

Coding Sequence: ATGGGAATTGCTGTGGAAAAAGTAAACCATACGACGTCGGATTCCGACTCAGAAATTCCTCTCTCCAAGCTAAGCGCACGAAAGCTACCTGTACGCGCAGCGCACAAAAAGATCAGTAAAAATCCAAAGCCCAAAGCAAAGTGTAAAGAGAAGATAACCGAGAAGGCAACGATCCCCTGCCAAGAATTTGATAACTTCATCAGCAAGAATATGAAACTCTCCTGCACAATTTGTCAAAAATCATTGTCAAGTTTCTTTGTTCTCAAAGAGCATTATCAACTGGCCCACAATGAGATTGGATTTGTTATTTGCTGTGAGAAGAAATTCGATAGCCGATCTGCCCTAGTTCATCACATTCAACTACATAAAGATCCGGAGTTTTTCAAGTGCGGTACATGCGGACGAGTATTAGCCAACAGGAAAAGTCTAAGAAATCACATGCTAGTGCACGTTGACAGGGATCGAACGTATCGATGTGAAAAGTGCAAGAAGGGCTTCTTTCGGAAGGAACGACTTGAGCGTCATTTGAAAACACATGTGAGACGTGAACAAATATGTGAACAATGCGGCAAGCCAAATGTAAATGATGTGAGTGCTCAAGTAATATGCACACCATGTTGGTGTGCATTGAACACATTTCATAATTTCTACTTGCAAGTAGAACAAGCTCATGCTAAGTTGCAAGAGGCGATTGCCATCGAAAAGGAGGAGCTGAAAGTTGAGAGTGAGAATGTTACCCCACAACCCATTGATCAGATTGATTTGGTACCATTTGATGCAGTTACGGCGGAGCATCTTAATACAGACATTAAACTTGAAGTCCAGGAAGACATTGAAGTAAAACTACCGCCAGAAATCATAGCAGCTGGTACTGGGGAAAAGGAAGAAGATCATAAGGGAGAGCCAAATAACAAAATTAACCATTCCACCGATTcggaaaaatcatttgaacacgAAGCACCACCTGCCAGCTCTACAAGAAGCCGAACGTCTGCAGAGAAATCCTACACAGAAATTCATTCATCAAGTGACGATGAGAGAGACAATGACAATACTCCAGATTGGCAAAATCAGAATTcagacaacgacgatgacgatagCGACTATGTTGATAATTCGCCCAAAACTAGTAAGGGCACGGAATCTTTGTCGACGACGAAAAAACGCGGACGCCCAAAAAAGGGGGAATCACGCGACACTCCTAGAAAGAGGAAACGTACCTCAGAGGAGCAATCCAAAAATATGGAACGAATACAGGAGTATGACGAGTTGATTGCAAAAAACATGAAGCTATCGTGCTCCATTTGCGTACATGTTTCGCCGAATTTCGCAGTCCTCAAGAAGCACTATCGTGTAATTCATAACGAGTGTGGTTATGCCACATGCTGTGGAAAAAAGTTCAGAAAACGTGGCGTCCTAGTCGATCACATTTACACGCATAAAAATCCGGAGTACTTTAAGTGCGATAAGTGTGGAAAAGTTCTCGCGAATCGTAAATGTTTGGATTGTCATATGTTGACGCATAACACAGAGAAGCAACGCATTTATCAGTGCGATCAGTGCACAATGAGTTTCTACACAAGGCCCCTGTTAACGAGGCATATGCAAACGCATATTTCAGTTCGAAACATCAAATGTCCCGATTGCGATAAGTTCTTTTCAACGCAGGATATCCTGCGAACACACATAAATAACGTTCATAATTCAGCCTACAATCGAATCTGCGATCAGTGTGGGAAATTATTCCGTCGTCCTGATGCATTTCGTCGTCATCAATTGGAACATGACGGGATTACTCAACCGCTGGTGCCATGTGAAAAATGTGGTGTAAAACTGACTAGCAAGTACGGCCTCAAGAGACACATGGAATCAATGCATCCTGAGACGGAAGTAACGCATGTGTGTAGCACTTGCGGGAAGGTTGCACCGTCTGCAGCGGCATTGCAAAGACACATATCGTATATGCATAAGATGGAACGGAAATACAAGTGTCCCATGTGTGATAAGGCGTTCAAAAAGACCGGTGGCCTCAAGCAAGTGGAAGAGGCGCACATAACTTTGGTAGGAAAAAGCGCCAGCACCAGTGATACATTGAAACAAGAAGATGAACACATAGTAATTTCAACAGATCTGGAAGAGAGTGACAAATTCAACCTGGTGTCGGATTTTCTCTCTGCAGACGTGAAGCTAGAGGTGAAGGAGGACGCCGAAATCAATCTACAACAGTATGATCCACTTCCCGACATCGAGGAAAAGGTGGAAATCAGTGAAATAGTAAAGGCAAAGAGGCAGAAACTGTCGGAGTCTCTGAATTCGGACGACTCGGAATCTGAGATTCCTTTGGCAAATTTGGCTAAGTCGCGATCCAGAAAAACAACTACAGTAAAACCACCTACAGCGTCCAGTAACGATGGCGCTGAATCTGGAGGAGAATGGCAAGACAACCATTCggttgacgatgacgacgatgatgaaagTGAGTTCGAGGTAAAGAAAACACCAAAACGAAAGATCATAGCGAAAACAGGAAAGAAACGTGGAAGGCCGTGTAAAAATGTGCCAAAGAACAGTATTCCCAAGCAAAGCACAGAGGAACAGATAAAAAAACGGGAACTCTCTCAGGAATATGATGAAATCATCCACAAGAACATCAAACTAACGTGTAATATCTGCCTTCTGCCATTAGCAAACTTCTTCATTCTGAAGAAGCATTACCGTTCCAAGCACAATGAACGCGGCTATGCTCTTTGCTGTGGAAAAAAGTTTCTCAAGCGTGGAATTTTGGTTGACCACATATATACTCACTTAAATCCAGAGCATTTCAAATGCGATAAGTGTGACAAGGTCCTTGCCGATAGACGATGCCTTGAAGTTCACATGAACACGCATATAACGGAAAAGCAACGCATCTATCAATGTGACCAATGCTGCAAGAGTTTCTTCAAGAAACCACTGCTTACACGCCACATGCATATTCATATACCGGAGGAGGAGCGGAAATTCCCCTGCGAGGAGTGTAACAAATTCTTCCCATCAAACTACACACTGCGGGCACATATCAATAACGTACATCAAAATGCGTACGCAAAAATATGTGATCAGTGTGGTAAATCAATACGTGGTAGAGAGGCATTCCAAAGGCATCTGCTGGAACATGCTGGCATACCGATTCCCAGTGTTCAATGCGACAAATGCGGGgcgaaattgaaaaacaaatatgGCCTTAAACGGCATATGAATTCTATGCACGCTGAATCAAGTGTTCCACATGTGTGCAACATTTGTGGCAAGATCGCACCAAATCCTGCTGCTCTGCAGCGTCACTACTCATATGTGCATAAGTGCGAACGTAACCATAAGTGCCCAATGTGCGATAAAGCATTTAAaaaagctggaggacttaaggAGCATATGACAACACACACCGGTGAAGTGCTTTACACATGTCCACATTGCCCAAAAACATTCAACTCCAATGCCAATATGCATTCGCATCGAAAGAAAATGCACCGCAAAGAATGGGAGGAGAATAGACGGCATCCACACATGGGCTCCACTGCGAGCACAGAATAA
Protein Sequence: MGIAVEKVNHTTSDSDSEIPLSKLSARKLPVRAAHKKISKNPKPKAKCKEKITEKATIPCQEFDNFISKNMKLSCTICQKSLSSFFVLKEHYQLAHNEIGFVICCEKKFDSRSALVHHIQLHKDPEFFKCGTCGRVLANRKSLRNHMLVHVDRDRTYRCEKCKKGFFRKERLERHLKTHVRREQICEQCGKPNVNDVSAQVICTPCWCALNTFHNFYLQVEQAHAKLQEAIAIEKEELKVESENVTPQPIDQIDLVPFDAVTAEHLNTDIKLEVQEDIEVKLPPEIIAAGTGEKEEDHKGEPNNKINHSTDSEKSFEHEAPPASSTRSRTSAEKSYTEIHSSSDDERDNDNTPDWQNQNSDNDDDDSDYVDNSPKTSKGTESLSTTKKRGRPKKGESRDTPRKRKRTSEEQSKNMERIQEYDELIAKNMKLSCSICVHVSPNFAVLKKHYRVIHNECGYATCCGKKFRKRGVLVDHIYTHKNPEYFKCDKCGKVLANRKCLDCHMLTHNTEKQRIYQCDQCTMSFYTRPLLTRHMQTHISVRNIKCPDCDKFFSTQDILRTHINNVHNSAYNRICDQCGKLFRRPDAFRRHQLEHDGITQPLVPCEKCGVKLTSKYGLKRHMESMHPETEVTHVCSTCGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKQVEEAHITLVGKSASTSDTLKQEDEHIVISTDLEESDKFNLVSDFLSADVKLEVKEDAEINLQQYDPLPDIEEKVEISEIVKAKRQKLSESLNSDDSESEIPLANLAKSRSRKTTTVKPPTASSNDGAESGGEWQDNHSVDDDDDDESEFEVKKTPKRKIIAKTGKKRGRPCKNVPKNSIPKQSTEEQIKKRELSQEYDEIIHKNIKLTCNICLLPLANFFILKKHYRSKHNERGYALCCGKKFLKRGILVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNTHITEKQRIYQCDQCCKSFFKKPLLTRHMHIHIPEEERKFPCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGIPIPSVQCDKCGAKLKNKYGLKRHMNSMHAESSVPHVCNICGKIAPNPAALQRHYSYVHKCERNHKCPMCDKAFKKAGGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGSTASTE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00671081; iTF_00672973; iTF_00671708;
90% Identity: iTF_00672973;
80% Identity: -