Basic Information

Insect: Eristalis tenax
Gene Symbol: grau
Assembly: GCA_905231855.1
Location: HG993127.1:33823821-33828473[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.082 13 7.1 0.3 2 23 277 299 276 299 0.95

2 18 0.038 5.8 8.2 0.5 6 23 308 325 307 325 0.99

3 18 0.016 2.4 9.4 4.5 1 23 331 353 331 353 0.98

4 18 2.5e-06 0.00037 21.3 0.8 1 23 361 383 361 383 0.99

5 18 2e-05 0.0031 18.5 0.3 2 23 390 412 389 412 0.95

6 18 2e-05 0.003 18.5 0.4 3 23 420 440 419 440 0.96

7 18 0.0001 0.016 16.2 0.2 2 23 449 471 448 471 0.95

8 18 0.00083 0.13 13.4 0.1 1 23 478 501 478 501 0.94

9 18 0.0022 0.34 12.0 0.3 1 17 507 523 507 524 0.89

10 18 3.1 4.7e+02 2.1 0.5 2 23 732 754 731 754 0.89

11 18 1.1e-05 0.0016 19.3 1.6 1 23 786 808 786 808 0.99

12 18 0.0087 1.3 10.2 6.4 1 23 816 838 816 838 0.98

13 18 2.6e-06 0.0004 21.3 0.3 1 23 846 869 846 869 0.96

14 18 0.0024 0.36 12.0 0.2 3 23 877 897 876 897 0.96

15 18 2.6e-05 0.0039 18.1 0.7 2 23 906 928 905 928 0.97

16 18 0.00023 0.035 15.1 0.1 1 23 935 958 935 958 0.94

17 18 6.9e-07 0.0001 23.1 1.0 1 23 964 986 964 986 0.98

18 18 1.7e-05 0.0026 18.7 5.0 1 23 992 1015 992 1015 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.082	13	7.1	0.3	2	23	277	299	276	299	0.95
2	18	0.038	5.8	8.2	0.5	6	23	308	325	307	325	0.99
3	18	0.016	2.4	9.4	4.5	1	23	331	353	331	353	0.98
4	18	2.5e-06	0.00037	21.3	0.8	1	23	361	383	361	383	0.99
5	18	2e-05	0.0031	18.5	0.3	2	23	390	412	389	412	0.95
6	18	2e-05	0.003	18.5	0.4	3	23	420	440	419	440	0.96
7	18	0.0001	0.016	16.2	0.2	2	23	449	471	448	471	0.95
8	18	0.00083	0.13	13.4	0.1	1	23	478	501	478	501	0.94
9	18	0.0022	0.34	12.0	0.3	1	17	507	523	507	524	0.89
10	18	3.1	4.7e+02	2.1	0.5	2	23	732	754	731	754	0.89
11	18	1.1e-05	0.0016	19.3	1.6	1	23	786	808	786	808	0.99
12	18	0.0087	1.3	10.2	6.4	1	23	816	838	816	838	0.98
13	18	2.6e-06	0.0004	21.3	0.3	1	23	846	869	846	869	0.96
14	18	0.0024	0.36	12.0	0.2	3	23	877	897	876	897	0.96
15	18	2.6e-05	0.0039	18.1	0.7	2	23	906	928	905	928	0.97
16	18	0.00023	0.035	15.1	0.1	1	23	935	958	935	958	0.94
17	18	6.9e-07	0.0001	23.1	1.0	1	23	964	986	964	986	0.98
18	18	1.7e-05	0.0026	18.7	5.0	1	23	992	1015	992	1015	0.98

Sequence Information

Coding Sequence: ATGCTCTGTATATTATGTGTTGGGACAACAGAAAACTGCATAAATATATTTCAAGATGAAGGGTGCGCTCTAAACATCAAGGCAATTATTGTGAAACACTTTTGGTTGCAGCCAAATGTAAATGATGTGAATGCAAAAGTAATATGCGCACCATGTTGGTGTGCATTGAACGCATTTCATAAGTTCTACTTGCAAGTAGAACAGGCTCATGCTAAATTGCAAGAGACGATTGCCATTGAAAAGGACGAGCTGAAAGTGGAGAATGATAATGTTGCCCAACAACTCATTAATCAGATTGATTTGGAACCCTTTGATGAAGTTACGGCGGATCTTCTTAATGCAGACGTAAAGCTTGAAGTCCAGGAAGATGTTGAAGTAAAACTACTGCCAGAAATCGCAACAGCTGGGACTGGGAAAAAGGAAGAATATCAAAAAGGAGAGTCATATAACAAGGTTAAGCATTCCACCGATTCGGAAAGATCATTTGAACACGAAGCCCCACCTGCCAGTTCTACAAGGAGACGAACTTCTGCAGAGAAATCCTACGCAGAAATTCATTCTTCAAGTGACGATGAGAGAGACAATGACAATACGGATTGGCAAAATCAGAATTCCGACAACGAAGATGACGATAGTGATTATGTTGACAATTCACCCAAAATTAGTAAGGGCGCGGAATGTTCGTCGACAACGAAAAAACGCGGACGCCAAAAAAAAGGGCAGTCCGGCGACGCGACTAGAAAGAAGAAACGTACCTCAGAAGAGCAATCCAAAAATATGGAACGCATCCAAGAGTACGACGAGTTGATTGCAAAGAACATGAAGCTATCGTGCTCCATTTGCGTACATATTTCTCCGAATTTTGCAGGCCTCAAGAAGCACTATCGTGTAATTCATAACGAGTGTGGGTATGCGACATGCTGTGGAAAAAAGTTCCGAAAACGCGGTGTGCTAGTGGATCACATTTACACACATAAAAATCCCGAGTACTTTAAGTGCGAAAAGTGTGGAAAAGTTCTCGCTAATCGTAAATGTTTGGATTGTCATATGTTAACGCATAACACAGAGAAGCAACGCACTTATCAGTGCGACCAGTGTCCAATGAGTTTCTACACAAGGCCCCTGCTAACGAGGCATTTGCAAACCCACATCTCCGTTCGAAACATCAAATGTCCCGAATGCGATAAGTTCTTTTCAACGCAGGATATCCTGCGAACACACATAAATAACGTTCATAATGCAGCGTACAATCGAATCTGCGATCAGTGTGGGAAACTATTCCGTCGTCCTGATGCTTTTCGTCGTCATCAATTAGAACACGATGGGATTACTCAACCACTGGTGCCATGTGAAAAATGTGGTGTAAAACTTACTAGCAAGTACGGCCTCAAAAGACACATGGAATCAATGCATCCTGAGACGGAAGTAACACATGTGTGTAGTACTTGCGGGAAGATAGCACCGTCTGCCGCGGCATTGCAACGACACATATCGTATATGCATAAGATGGAACGAAAATACAAGTGTCCTATGTGCGATAAGGCGTTCAAAAAGACCGGCGGCCTCAAGCAAGTGGAAGAAGCGCACATCAGTTTGGTACGAAAAAGCGCCAGCACCAGTGACACACTGAAACAAGAAGATGAGAACATAGTCGTCTCAACGGAGGTGGACGAGAGTGAGAAATTCAACCTGGTGTCGGATTTTCTCTCTGCAGACGTGAAGCTAGAAGTTAAGGAGGATGCTGAAATCAATCTACAGCAATATGATCCACTGCCTGACGTCGAGGAAAAGGTCGAAATAAGTGAAATAGTAAAGTCAAAGCGGCAAAAACAGTCAGAATCATTGAATTCGGACGACTCTGAATCTGAAATTCCATTGGCAAATTTGGCTAAATCCCGATCTAGAAAAACAACAAAAGTAAAAGCGCTTACAGCGTCCAGTAACGAGGACGCTGAATCTGGAGCAGAGTGGCAAGACAACCATTCTGTTGACGATGACGATGACGATGAAAGTGAGTTCGAGGTAAAGAAAACACCAAAACGAAAAATTGTAGCAAAAACAGGAAAAAAACGCGGACGGCCATGTAAAAATGTTCCAAAGAATAATACCCCTAAGCAGACCACAGAGGAACAGATCAAAAAACGGGAGCTTTCTCAGGAATATGATGAAATCATCTACAAGAACATCAAACTGACGTGCAACATCTGTCTTCTGCCATTAGCAAACTTCTTCATCCTGAAGAAGCATTACCGTTCCAAGCACAATGAGCGCGGATATGCTCTTTGCTGTGGAAAAAAATTCCTCAAGCGTGGAATTTTGGTTGACCATATATATACTCACTTAAATCCAGAGCATTTCAAATGCGATAAGTGTGACAAAGTCCTTGCCGACAGAAGATGCCTTGAAGTTCACATGAACACGCATATAACGGAAAAGCAACGCATCTACCAATGTGATCAATGCTGCAAAAGTTTCTTTAAGAAACCTCTGCTCACACGTCACATGCATATCCATATACCCGAGGAGGAGCGGAAATTCCCCTGCGAGGAGTGCAACAAATTCTTCCCATCTAACTACACACTGCGGGCACATATTAATAACGTCCATCAAAACGCGTACGCAAAAATATGTGATCAGTGTGGTAAATCAATACGTGGTAGAGAGGCATTCCAAAGGCATCTGCTGGAACATGCTGGCATACCGATTCCCAGTGTTCAATGCGACAAATGTGGAGCGAAATTGAAAAACAAATATGGCCTTAAACGGCATATGAATTCTATGCACGCGGAATCGAGTGTTCCACACGTGTGCAACATTTGTGGTAAGATCGCTCCTAATCCTGCTGCTCTGCAGCGTCACTACTCATATGTACATAAATGTGAACGCAACCATAAGTGCCCAATGTGCGATAAAGCATTTAAAAAAGCTGGAGGACTTAAGGAGCATATGACAACACACACAGGAGAGGTACTTTACACATGTCCACATTGCCCAAAAACATTCAACTCCAATGCCAATATGCATTCGCATCGAAAGAAAATGCATCGCAAAGAATGGGAGGAAAATAGACGGCACCCGCACATGGGTTCGACTGCGAGTACAGAATAA
Protein Sequence: MLCILCVGTTENCINIFQDEGCALNIKAIIVKHFWLQPNVNDVNAKVICAPCWCALNAFHKFYLQVEQAHAKLQETIAIEKDELKVENDNVAQQLINQIDLEPFDEVTADLLNADVKLEVQEDVEVKLLPEIATAGTGKKEEYQKGESYNKVKHSTDSERSFEHEAPPASSTRRRTSAEKSYAEIHSSSDDERDNDNTDWQNQNSDNEDDDSDYVDNSPKISKGAECSSTTKKRGRQKKGQSGDATRKKKRTSEEQSKNMERIQEYDELIAKNMKLSCSICVHISPNFAGLKKHYRVIHNECGYATCCGKKFRKRGVLVDHIYTHKNPEYFKCEKCGKVLANRKCLDCHMLTHNTEKQRTYQCDQCPMSFYTRPLLTRHLQTHISVRNIKCPECDKFFSTQDILRTHINNVHNAAYNRICDQCGKLFRRPDAFRRHQLEHDGITQPLVPCEKCGVKLTSKYGLKRHMESMHPETEVTHVCSTCGKIAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKQVEEAHISLVRKSASTSDTLKQEDENIVVSTEVDESEKFNLVSDFLSADVKLEVKEDAEINLQQYDPLPDVEEKVEISEIVKSKRQKQSESLNSDDSESEIPLANLAKSRSRKTTKVKALTASSNEDAESGAEWQDNHSVDDDDDDESEFEVKKTPKRKIVAKTGKKRGRPCKNVPKNNTPKQTTEEQIKKRELSQEYDEIIYKNIKLTCNICLLPLANFFILKKHYRSKHNERGYALCCGKKFLKRGILVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNTHITEKQRIYQCDQCCKSFFKKPLLTRHMHIHIPEEERKFPCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGIPIPSVQCDKCGAKLKNKYGLKRHMNSMHAESSVPHVCNICGKIAPNPAALQRHYSYVHKCERNHKCPMCDKAFKKAGGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGSTASTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00672341;
90% Identity: iTF_00672341;
80% Identity: -