Basic Information

Insect: Eristalis pertinax
Gene Symbol: SALL1
Assembly: GCA_907269125.1
Location: OU026148.1:5897675-5900576[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0078 0.62 10.5 0.1 2 23 81 103 80 103 0.94

2 20 0.00082 0.066 13.5 0.1 3 23 111 131 109 131 0.94

3 20 0.00022 0.018 15.3 0.7 2 23 140 161 140 161 0.97

4 20 0.00029 0.023 15.0 1.0 1 23 167 190 167 190 0.96

5 20 1.6e-05 0.0013 18.9 1.2 1 23 222 244 222 244 0.92

6 20 9.3e-07 7.5e-05 22.8 0.6 1 23 250 272 250 272 0.98

7 20 1.1e-06 8.5e-05 22.6 0.6 1 23 278 301 278 301 0.98

8 20 0.0025 0.2 12.0 1.1 1 23 311 334 311 334 0.94

9 20 3e-05 0.0025 18.0 3.5 5 23 429 447 426 447 0.94

10 20 5.6e-06 0.00045 20.3 0.1 1 23 453 475 453 475 0.97

11 20 0.0015 0.12 12.7 0.2 1 23 486 510 486 510 0.96

12 20 0.0005 0.04 14.2 0.8 1 20 516 535 516 537 0.94

13 20 0.19 15 6.1 6.0 1 23 575 597 575 597 0.97

14 20 5.2e-05 0.0042 17.3 3.3 1 23 603 625 603 625 0.98

15 20 1.1e-06 8.5e-05 22.6 0.2 1 23 631 653 631 653 0.97

16 20 5.5e-05 0.0045 17.2 3.1 1 23 659 681 659 681 0.98

17 20 8.9e-08 7.2e-06 26.0 2.0 1 23 782 804 782 804 0.98

18 20 0.00022 0.018 15.3 1.1 1 23 810 832 810 832 0.97

19 20 3.6e-05 0.0029 17.8 0.5 1 23 839 861 839 861 0.97

20 20 3.6e-05 0.0029 17.8 3.9 1 23 867 889 867 890 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0078	0.62	10.5	0.1	2	23	81	103	80	103	0.94
2	20	0.00082	0.066	13.5	0.1	3	23	111	131	109	131	0.94
3	20	0.00022	0.018	15.3	0.7	2	23	140	161	140	161	0.97
4	20	0.00029	0.023	15.0	1.0	1	23	167	190	167	190	0.96
5	20	1.6e-05	0.0013	18.9	1.2	1	23	222	244	222	244	0.92
6	20	9.3e-07	7.5e-05	22.8	0.6	1	23	250	272	250	272	0.98
7	20	1.1e-06	8.5e-05	22.6	0.6	1	23	278	301	278	301	0.98
8	20	0.0025	0.2	12.0	1.1	1	23	311	334	311	334	0.94
9	20	3e-05	0.0025	18.0	3.5	5	23	429	447	426	447	0.94
10	20	5.6e-06	0.00045	20.3	0.1	1	23	453	475	453	475	0.97
11	20	0.0015	0.12	12.7	0.2	1	23	486	510	486	510	0.96
12	20	0.0005	0.04	14.2	0.8	1	20	516	535	516	537	0.94
13	20	0.19	15	6.1	6.0	1	23	575	597	575	597	0.97
14	20	5.2e-05	0.0042	17.3	3.3	1	23	603	625	603	625	0.98
15	20	1.1e-06	8.5e-05	22.6	0.2	1	23	631	653	631	653	0.97
16	20	5.5e-05	0.0045	17.2	3.1	1	23	659	681	659	681	0.98
17	20	8.9e-08	7.2e-06	26.0	2.0	1	23	782	804	782	804	0.98
18	20	0.00022	0.018	15.3	1.1	1	23	810	832	810	832	0.97
19	20	3.6e-05	0.0029	17.8	0.5	1	23	839	861	839	861	0.97
20	20	3.6e-05	0.0029	17.8	3.9	1	23	867	889	867	890	0.96

Sequence Information

Coding Sequence: ATGCAAAACAACACAGACCTGTTCACGCCAGTGCATATGAGCACATCCACCGGCCTGCTCTACCCATTGAATGATGGAGACGAAAAATTCGACGCGTTCGAAATGGACGGCTTTGCCGTTCCCGAGATCGACTACCCCACCAGCTTGTGTCCAATTCCCGAGGAGACTCTGCTGGATCCTCTATTTTCCCCCGTCGACTCGGCTCAGTCTGGGACGAAGTTCTCCCTGCAGAAGCAGCTGCCGTGCGACTTGTGCTCGGAGACCTTTCCGTCGGCACAAGTTCTACGCCTGCACAGGCGAGAGAAGCACATCGCAACCAAGGAGTTTGGCTGCGACAAGTGTCCGATGTCGTTCAATTTCCAATCGAATCTCGTCCTGCATGTGGCCGCGCATGTGCCCGTGCAAAGTGCGGACAACGAATGCCCCGAGTGCAGGATGGTCTTTAAGCGCATCTCCAGCTTTAAGGGCCACCTGAAATCCCATCAGACCAGCGATCGATTCAAGTGCAATCGGTGCGACAAGGAGTTCGATTTGAAGGGCTACTACGAGAAGCATCTGGCGAAGGCGCACAAGCCCGGCGCTGATGGGACCATCGAGGAGATTCTGGCTAAAGTTGAAAACAGTGCCAGGAGCCGTGCGAAGTCGAAGCGAACTCAGGGGAAGTACCAGTGTGAGACGTGCGGGAAGAGCTTCCCGAAGCCGTGCCTGCTGAAGCGCCACGAAGTGGCCCACACCGGCGCGAAGCCATTCAAGTGCGCAGAATGCGATCAAGGATTCACACAGAAAACCTCCTTGGAACGGCACATGCTCCTGCATCAGGGGATCAAGGACTTCAAGTGTCCCAAGTGCAATGCGGGCTTCTCGCAGAAGAACAACCTGATTGTGCACATCAAACGCACCCACCCAGTGCACCGGAACACGGAGAACATGTTCGCCTGCGAATACTGTCCGTGCGTGTTCACGAAGCTGAACAGCGTGAACCGGCATAAGGCCATGGTCCATGCGGACAAAGCAAACGCCGCTGACGACGATGGcttcaacgacgacgacgacgacaacgtgAACATTGCTCGTGTCATGGAGCAGCTGAAGAGCTTTCAGGAGTCGATGGGCATTAAGGATATGCAGCCGCCCGCTCTGGAGCTGTCCCTCATGAAGCCCCCATCGCCGGGACCAAAGGTCCGCACGGTGACGCTGATTGACACGCTGAATCCGAAGAAGGAGAAAACCTACAAGACTGTCAAGGAGATCGAGTACAAGGGACAGAGGACGATGGCGTGCATTTACTGCGATAAGACCTTCAAGCGTCAGTTCGACTTATTGAGACACCATCGAACCCACACGAAGGAGCGTCCATTCGAGTGCGAAATCTGTCAGAAAAGCTTTGCGACAAACGCGGCGCTTAAGATCCACAACAACATACACCTCTCCTCGCACGACAAGCCGGCAAAGGTGTACACATGTGCAGCTCCCGAATGCGGTAAGCGCTTCTCCTCCATGCGACGGCTGGACATCCACGCCAAAACCCACACGAGTGGCATTTCCTACATCTGCCCCCTCTGCTCGAAAACGTTCACGTCCAAGGCCGGCTTCTCGGCTCACAAGCACCAGCCCAACGACAGGGAATTTGACATGATTCGTCCGCTTCTCATGCCGCCTCTAAACATCGAATCCAATTCCGCAGAGGAGGCCGAAAAGGCCGAGGAGTACTCGAAGCGATCCCACCAATGCTGCGTCTGCGGTTTGAAGATGAAGAAGCTGTCGCACTTGAGGCAGCACGAGGCTACCCACACGGGCGACAAGCCATTCAAGTGCACCACCTGCTTTCGGTCGTACACAACGCAGAGCTCCCTGAACCTCCACAAGCAAATCCACGCCTCAGTTAAGCGCTATGCCTGCGAAGTGTGTGACGTCAAGTTCATCACCCAGTCGCTGCTCAAGCGGCACATGATCTCGCACAGCGACGAGCGTAAgttcgagtgtccctactgcagCGAGCGCTTCAAGACCAGTGACAACTGCAAGAATCACATTCTAACCCACGGCCGCAGTCTGCTGGCCACTCCGGagtcgccaccaccaccgccggaCGATGGGAATGCTTCGCCTTGCCACGTCGACCGCGAAGGAGAAGTCCTGGCAACCATTTCGCAGCCGTGCATCGCGGTGGTGCAGAGCGACCACAGCCATCTGTCGCCGAAGTTCATTCAAATCGAGATGGTCAAGAACTGCAAAAAGCATAACCACACAAATCTGACCATCGAAACGGTGCCTTCCACGCCGAAGAAGTCTGCGAAGCGGTCACTGGCGCGTTCCTTGAAGCAAATCAGTCAGCCGGGCGGTCATCAGTGCACCGAGTGCGGCAAGACTTTCTACAAAGCCAGCGATTTGGAACGCCACGCTCGCACGCACACGAAAGAGAAACCATTCGCGTGCAGTTTGTGCTCGAAGACATTCGCTTTGACCTCAACGCTGGTTCAGCATAGGAAGACGCACGATACACTGCGCGAGACGTACGATTGCCAGGTCTGCGGCAAGAAGTACACGTCGAAGAAAGTGCTCGTTGTGCACCTGCGACTGCACACGGGCGAACGGCCGTTTCAGTGCGGCGTGTGCCAGAAGACATTCAGGACTTCGGGCCATAAGATAGCGCACATTAAGTCGCATCATAAGAAGCGGAAGTAG
Protein Sequence: MQNNTDLFTPVHMSTSTGLLYPLNDGDEKFDAFEMDGFAVPEIDYPTSLCPIPEETLLDPLFSPVDSAQSGTKFSLQKQLPCDLCSETFPSAQVLRLHRREKHIATKEFGCDKCPMSFNFQSNLVLHVAAHVPVQSADNECPECRMVFKRISSFKGHLKSHQTSDRFKCNRCDKEFDLKGYYEKHLAKAHKPGADGTIEEILAKVENSARSRAKSKRTQGKYQCETCGKSFPKPCLLKRHEVAHTGAKPFKCAECDQGFTQKTSLERHMLLHQGIKDFKCPKCNAGFSQKNNLIVHIKRTHPVHRNTENMFACEYCPCVFTKLNSVNRHKAMVHADKANAADDDGFNDDDDDNVNIARVMEQLKSFQESMGIKDMQPPALELSLMKPPSPGPKVRTVTLIDTLNPKKEKTYKTVKEIEYKGQRTMACIYCDKTFKRQFDLLRHHRTHTKERPFECEICQKSFATNAALKIHNNIHLSSHDKPAKVYTCAAPECGKRFSSMRRLDIHAKTHTSGISYICPLCSKTFTSKAGFSAHKHQPNDREFDMIRPLLMPPLNIESNSAEEAEKAEEYSKRSHQCCVCGLKMKKLSHLRQHEATHTGDKPFKCTTCFRSYTTQSSLNLHKQIHASVKRYACEVCDVKFITQSLLKRHMISHSDERKFECPYCSERFKTSDNCKNHILTHGRSLLATPESPPPPPDDGNASPCHVDREGEVLATISQPCIAVVQSDHSHLSPKFIQIEMVKNCKKHNHTNLTIETVPSTPKKSAKRSLARSLKQISQPGGHQCTECGKTFYKASDLERHARTHTKEKPFACSLCSKTFALTSTLVQHRKTHDTLRETYDCQVCGKKYTSKKVLVVHLRLHTGERPFQCGVCQKTFRTSGHKIAHIKSHHKKRK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00671079; iTF_00672971; iTF_00671706;
90% Identity: iTF_00672971;
80% Identity: -