Eten012719.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- -
- Assembly
- GCA_905231855.1
- Location
- HG993127.1:62336761-62339666[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0023 0.35 12.0 0.3 2 23 83 105 82 105 0.95 2 20 0.0073 1.1 10.4 0.8 3 23 113 133 111 133 0.96 3 20 0.019 2.8 9.1 1.9 2 23 142 163 142 163 0.97 4 20 0.00026 0.04 15.0 1.0 1 23 169 192 169 192 0.96 5 20 1.4e-05 0.0022 18.9 1.2 1 23 224 246 224 246 0.92 6 20 8.4e-07 0.00013 22.8 0.6 1 23 252 274 252 274 0.98 7 20 9.5e-07 0.00014 22.6 0.6 1 23 280 303 280 303 0.98 8 20 0.0023 0.35 12.0 1.1 1 23 313 336 313 336 0.94 9 20 2.7e-05 0.0042 18.0 3.5 5 23 431 449 428 449 0.94 10 20 9.5e-06 0.0015 19.5 0.5 1 23 455 477 455 477 0.98 11 20 0.0013 0.2 12.7 0.2 1 23 488 512 488 512 0.96 12 20 0.00045 0.069 14.2 0.8 1 20 518 537 518 539 0.94 13 20 0.17 26 6.1 6.0 1 23 577 599 577 599 0.97 14 20 1.1e-05 0.0016 19.3 2.5 1 23 605 627 605 627 0.98 15 20 5.8e-07 8.9e-05 23.3 0.2 1 23 633 655 633 655 0.97 16 20 1.9e-05 0.0029 18.5 3.2 1 23 661 683 661 683 0.98 17 20 1.3e-06 0.0002 22.2 3.0 1 23 778 800 778 800 0.98 18 20 8.5e-05 0.013 16.5 0.9 1 23 806 828 806 828 0.97 19 20 3.2e-05 0.005 17.8 0.5 1 23 835 857 835 857 0.97 20 20 5.3e-05 0.0081 17.1 5.4 1 23 863 885 863 886 0.96
Sequence Information
- Coding Sequence
- ATGCAAAACAACACAGATTTGTTCACGCCAGTGCATCTGAGCACATCCAATGCACTGATGTACCCATTACATGATGGGGATGAAAAATTCGATGCCTTTGAAATGGATGGCTTTGCTGTTCCGGAGATCGATTACCCCACTATAACCAGTCTGTGTCCAATTCCAGAAGAGACTCTGTTGGATCCTTTATTTTCTCCAGTTGACTCAGCACAGTCGGGGTCGAAGTTCTCCCTGCAAAAGCAACTGCCGTGTGATTTGTGTTCGGAGACGTTTTCGTCGGCACAAGTTCTGCGTCTGCACAGACGTGAGAAGCACATCGCAACTAAAGAGTTCGGCTGTCGCAAGTGTACAATGTCATTTAATTTCGAATCGAATCTCGTGCTCCATACCGCATCACATGTGCCTGTTCAAAGTGTTGAGAACGAATGTCCCGAGTGCTGTATGGTTTTCAAGAGGATCTCCAGCTTTAAGGGTCACCTGAAATCCCATCAGACCAGCGATCGATTTAAGTGCAATCGGTGCGACAAGGAATTCGATTTGAAGGGCTACTACGAGAAGCACTTGGCAAAGGCTCACAAGCCCGGTGCTGATGGGACGGTGGAGGAGATTTTGGCAAAAGTTGAAAACAGTGCCAGAGTCCGATCGAAGTCGAAGAAAACTTACGGCAAGTACCAGTGTGAGACGTGTGGGAAGAGTTTCCCAAAACCATGCCTACTCAAGCGTCACGAAGTGGCACATACCGGCGCGAAGCCATTTAAGTGCGCAGAATGCGATCAAGGATTCACCCAGAAAACTTCTTTGGAGCGGCACATGCTTCTGCATCAGGGAATCAAGGATTTCAAGTGTCCCAAGTGCAATGCGGGTTTCTCGCAGAAGAACAACCTCATTGTACACATCAAGCGCACACACCCAGTGCATCAAAACACTGATAATATGTTCGCATGCGAATATTGTCCTTGTGTGTTCACGAAGCTGAACAGTGTGAACCGACATAAGGCCATGGTCCACGCAGACAAAGCAAACGCCGCGGACGATGATGGCTTCAACGATGACGACGACGATAACGTGAATATTGCCCGAGTCATGGAGCAACTAAAGAGTTTTCAGGAGTCCATGGGCATAAAGGATATGCAACCTCCAGCCCTAGAGCTGTCTCTCATGAAACCCCCATCGCCGGGGCCAAAAGTTCGCACGGTGACGCTGATTGACACGTTGAATCCGAAGAAGGAGAAGACCTACAAGACTGTCAAGGAGATCGAGTACAAGGGACAGAGGACGATGGCGTGTATTTACTGCGATAAGACCTTCAAACGGCAATTCGATTTATTGAGACACCATCGAACCCACACAAAGGAGCGTCCATTTGAGTGTGAAGTCTGTCAGAAAAACTTTGCGACAAACGCAGCACTCAAGATCCACCACAACATACATCTGTCCTCGCACGACAAGCCAGCAAAAGTCTACACGTGTGCAGCTCCTGAATGCGGAAAACGTTTCTCGTCCATGAGAAGGCTGGACATCCACGCCAAAACTCATACGAGTGGTATTTCCTACATCTGTCCGCTGTGCTCGAAAACATTCACATCCAAGGCCGGGTTCTCGGCTCACAAACATCAGCCTAACGACAAGGAATTTGACTTGATACGTCCGCTGCTTATGCCGCCAATTAACATCGAATCCAACTCCGCTGATGAGGCCGAAAAAGCCGAGGAATACTCTAAGAGATCCCACCAATGCTGCGTCTGCGGTTTGAAAATGAAGAAGCTGTCTCACTTAAGGCAACACGAAGCAACCCACAAGGGGGACAAGCCATTCAAATGCACGATCTGCTTCAGGTCTTACACAACGCAGAGCTCCCTGAACCTTCACAAACAAATTCACGCCTCGGTAAAGCGCTATGCCTGCGAAGTCTGTGACATCAAGTTCATCACTCAGTCCCTCCTCAAGCGTCACATGATCTCACACAGCGACGAGCGTAAGTTCGAGTGTCCCTACTGCAATGAGCGCTTCAAGACCAGTGACAACTGCAAAAACCACATTCTAACCCACGGCCGCAGTCTTCTGGCCACTCCAGAGCCTCCCTCGGACGATGGAGATCCATCGCGTCTCGAATCCGAAGCAGAAGCCCTGGAAACCATATCGCAGCCCTGCATCGCGGTGGTGCAAAGCGAACAGAGCAATCTGTCGCCGAAGTTCATTCAAATCGAGATGGTCAAAAACTGCAAGAAACATAACCATACAAATCTGATCATAGAAACGGTGCCTTCCACACCAAAGAAGTCGGCAAAACGGTCGTTGGCGCGTTCCTTGAAGCAAATCAGTCAGCCGGGCCATCAGTGCAACGAGTGCCGCAAAACCTTCTACAAAGCCAGCGATTTGGAACGTCATGCTCGGACACACACAAAAGAGAAGCCCTTTGCATGCAGTTTGTGCTCGAAGACATTTGCTCTGACCTCGACTCTGGTTCAGCACCAAAAGACCCACGATACACTGAGGGAGACGTACGATTGCCAGGTGTGCGGCAAGAAGTATACGTCGAAGAAGGTGCTGGTTGTGCACTTGCGACTGCACACGGGCGAGCGGCCGTTCCAGTGTGGGGTGTGTCAGAAGACATTCAGAACTTCGGGACATAAGATATCCCACATGAAGTCGCATCATAAGAAACGAAAGTAG
- Protein Sequence
- MQNNTDLFTPVHLSTSNALMYPLHDGDEKFDAFEMDGFAVPEIDYPTITSLCPIPEETLLDPLFSPVDSAQSGSKFSLQKQLPCDLCSETFSSAQVLRLHRREKHIATKEFGCRKCTMSFNFESNLVLHTASHVPVQSVENECPECCMVFKRISSFKGHLKSHQTSDRFKCNRCDKEFDLKGYYEKHLAKAHKPGADGTVEEILAKVENSARVRSKSKKTYGKYQCETCGKSFPKPCLLKRHEVAHTGAKPFKCAECDQGFTQKTSLERHMLLHQGIKDFKCPKCNAGFSQKNNLIVHIKRTHPVHQNTDNMFACEYCPCVFTKLNSVNRHKAMVHADKANAADDDGFNDDDDDNVNIARVMEQLKSFQESMGIKDMQPPALELSLMKPPSPGPKVRTVTLIDTLNPKKEKTYKTVKEIEYKGQRTMACIYCDKTFKRQFDLLRHHRTHTKERPFECEVCQKNFATNAALKIHHNIHLSSHDKPAKVYTCAAPECGKRFSSMRRLDIHAKTHTSGISYICPLCSKTFTSKAGFSAHKHQPNDKEFDLIRPLLMPPINIESNSADEAEKAEEYSKRSHQCCVCGLKMKKLSHLRQHEATHKGDKPFKCTICFRSYTTQSSLNLHKQIHASVKRYACEVCDIKFITQSLLKRHMISHSDERKFECPYCNERFKTSDNCKNHILTHGRSLLATPEPPSDDGDPSRLESEAEALETISQPCIAVVQSEQSNLSPKFIQIEMVKNCKKHNHTNLIIETVPSTPKKSAKRSLARSLKQISQPGHQCNECRKTFYKASDLERHARTHTKEKPFACSLCSKTFALTSTLVQHQKTHDTLRETYDCQVCGKKYTSKKVLVVHLRLHTGERPFQCGVCQKTFRTSGHKISHMKSHHKKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672338;
- 90% Identity
- iTF_00672338;
- 80% Identity
- -