Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: -
Assembly: GCA_944738805.1
Location: CALYJE010000056.1:328661-331547[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0065 0.71 10.5 0.1 2 23 79 101 78 101 0.95

2 20 4.6e-06 0.0005 20.5 0.9 1 23 107 129 107 129 0.98

3 20 0.00013 0.014 15.9 0.7 2 23 138 159 137 159 0.97

4 20 0.00025 0.027 15.0 1.0 1 23 165 188 165 188 0.97

5 20 0.00015 0.016 15.7 1.0 1 23 220 242 220 242 0.89

6 20 6.4e-07 7e-05 23.2 1.1 1 23 248 270 248 270 0.98

7 20 9.3e-07 0.0001 22.6 0.6 1 23 276 299 276 299 0.98

8 20 0.0023 0.25 12.0 1.1 1 23 309 332 309 332 0.94

9 20 7.9e-07 8.6e-05 22.9 3.2 3 23 425 445 423 445 0.97

10 20 6.1e-07 6.6e-05 23.2 0.2 1 23 451 473 451 473 0.98

11 20 0.00066 0.071 13.7 0.3 1 23 484 508 484 508 0.96

12 20 0.00044 0.048 14.2 0.8 1 20 514 533 514 535 0.94

13 20 0.031 3.4 8.4 3.7 1 23 573 595 573 595 0.97

14 20 1.3e-05 0.0014 19.0 2.4 1 23 601 623 601 623 0.98

15 20 4.5e-06 0.00049 20.5 0.9 1 23 629 651 629 651 0.96

16 20 3.7e-06 0.0004 20.8 2.4 1 23 657 679 657 679 0.98

17 20 2.5e-06 0.00027 21.3 2.2 1 23 774 796 774 796 0.98

18 20 0.00069 0.075 13.6 0.8 1 23 802 824 802 824 0.97

19 20 3.2e-05 0.0035 17.8 0.5 1 23 831 853 831 853 0.97

20 20 5.2e-05 0.0057 17.1 5.4 1 23 859 881 859 882 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0065	0.71	10.5	0.1	2	23	79	101	78	101	0.95
2	20	4.6e-06	0.0005	20.5	0.9	1	23	107	129	107	129	0.98
3	20	0.00013	0.014	15.9	0.7	2	23	138	159	137	159	0.97
4	20	0.00025	0.027	15.0	1.0	1	23	165	188	165	188	0.97
5	20	0.00015	0.016	15.7	1.0	1	23	220	242	220	242	0.89
6	20	6.4e-07	7e-05	23.2	1.1	1	23	248	270	248	270	0.98
7	20	9.3e-07	0.0001	22.6	0.6	1	23	276	299	276	299	0.98
8	20	0.0023	0.25	12.0	1.1	1	23	309	332	309	332	0.94
9	20	7.9e-07	8.6e-05	22.9	3.2	3	23	425	445	423	445	0.97
10	20	6.1e-07	6.6e-05	23.2	0.2	1	23	451	473	451	473	0.98
11	20	0.00066	0.071	13.7	0.3	1	23	484	508	484	508	0.96
12	20	0.00044	0.048	14.2	0.8	1	20	514	533	514	535	0.94
13	20	0.031	3.4	8.4	3.7	1	23	573	595	573	595	0.97
14	20	1.3e-05	0.0014	19.0	2.4	1	23	601	623	601	623	0.98
15	20	4.5e-06	0.00049	20.5	0.9	1	23	629	651	629	651	0.96
16	20	3.7e-06	0.0004	20.8	2.4	1	23	657	679	657	679	0.98
17	20	2.5e-06	0.00027	21.3	2.2	1	23	774	796	774	796	0.98
18	20	0.00069	0.075	13.6	0.8	1	23	802	824	802	824	0.97
19	20	3.2e-05	0.0035	17.8	0.5	1	23	831	853	831	853	0.97
20	20	5.2e-05	0.0057	17.1	5.4	1	23	859	881	859	882	0.96

Sequence Information

Coding Sequence: ATGCAAAACAATACAGATCTCTTCACACCAGCGCATAGTATAGCCACTTCCACAACCCTTCTGTATCCCCTAAACGATGGGGATGAGAAATTCGATGCGTTTGAAATGGACGGCTTTGCTGTTCCAGAGATTGACTACCCAACCATCACCAGTTTATGTCCAATTCCAGAGGAGACTCTATTGGATCCCTTATTTTCTCCTGTTGACACAGTCTCATCGGATCCAAAGTCACTGCCATGTGATTTGTGCACAGAAACTTTCCCATCGGCGCAGGTGCTGCGTCTGCACCGAAGAGAGAAGCACATCGCCACAAAGGAATTCCGCTGTTCAAAGTGTCCGATGTCGTTCAATTTCGAATCAAATCTCACACTTCACATGGCGTCTCATGTGCCCGTGCAAAATGTGGACAAAGAATGCCCCGAGTGCAGTATGGTTTTCAAGAGAATCTCCAGCTTTAAGGGGCATCTGAAGTCGCATCAGACAAGTGATCGATTCAAGTGTAATCGGTGTGAGAAGGAATTCGATTTGAAGGGTTACTATGAGAAGCATATGGCGAAGGCCCACAAGCCAGGTGCTGATGGGACTGTCGAGGAGATTCTGGCGAAAGTTGAAAACAGTGCCAGAATTCGTTCAAAATCTAAGAAATCCCAGGGAAAGTATCTGTGCGAGACATGTGGGAAAAGCTTCCCTAAACCCTGCTTGCTTAAGCGTCACGAAGTGGGTCACACTGGTGCAAAACCGTTCAAGTGCGAGCAATGCGATCAAGGATTCACACAGAAAACGTCGCTGGAGCGACACATGCTCCTACATCAGGGTATCAAGGACTTCAAATGTCCCAAGTGCAACGCCGGTTTCTCTCAGAAGAATAATCTCATCGTCCACATCAAGCGCACACATCCGGTGGACCAGAACACGGAGAACATGTTCGCATGTGAGTACTGTCCGTGCGTGTTCACAAAGCTGAATAGTGTGAATCGCCACAAAGCCATGGTGCATGCGGACAGGGTAAATGACGCGGACAATGATGGCTTCAACGACGAAGACGACGACAACGTGAATATCGCTCGAGTTATGGAGCAATTGAAGAGTTTTCAGGAATCCATGGGGATAAAGGACATGCAACCACCTGCCCTGGAGATGTCCCTCATGAAGCCACCATCTCCTGGGCCGAAGGTCCGAACAGTGACGGTTGTGGACACTTTGAATCCGAAGAAGGAGAAGACATACAAGACTGTGAAAGAGATTGAATACAAAGGACAAAGGACCATGGCGTGCAATTACTGCGATAAGACGTTTAAGCGGCAGTTTGATTTGTTGAGACATCATCGAATTCACACCAAGGAGCGGCCATTTGAGTGTGAAATTTGCCAGAAGAACTTCTCGACAAACGCCGCGCTAAAAATCCACCAGAACATCCACGTCTCCTCGCACGATAAGCCAGCAAAAGTGTACACATGTGCAGCGCCAGAATGCGGCAAACGTTTCTCATCCATGCGGCGACTGGATATACACACCAAAACTCACACCAGTGGCATTTCCTACATCTGCCCGCTGTGCTCGAAAACCTTCACATCCAAGGCCGGCTTCTCCGCCCACAAGCATCAGCCTAACGACAAGGAATTTGACATGATTCGTCCACTTCTCATGCAGCCCGTGAATATCGAGTCAAACTCCACCGACGAGGCCGACAAAGCGGAGGAGTACTCGAAGAGAATCCACCAATGCTACGTTTGCGGATTGAAAATGAAGAAACTGTCCCATCTACGGCAACACGAAGCGACCCATACCGGCGACAAGCCATACAAGTGCACCGTCTGCTTCAGATCCTACACAACACAAAGCTCCCTGAATCTACACAAGCAAATCCACGCGGCGGAGAAGCCACACGCTTGCGAGGTCTGCAACGCCAAGTTCATAACACAATCCCTCCTCAAGCGGCACATGATCTCCCACAGTGACGAGCGAAAGTTTGAGTGTCCCTACTGCGGCGAGCGCTTCAAGACGAGTGACAACTGCAAGAACCACATTCTCACCCACGGACGTAATCTCCTCGCCACTCCGGACCCACCTCCTGACGACGGGACGCTCCAACATGTCGAATCCGAAGGAGAAGTGATTGAGACCATTTCCCAACCATGCATCGCAGTGGTTCAAAGCGAGGAGCCATATCTATCACCAAAGTTCATCCAAATCGAGATGGTGAAGAACTGCAAGAAACACAACCACAAGAACCTGACCATAGAGACGGTTCCCAGCACGCCAAAGAAGTCAGCGAAGCGTTCATTGGCACGTTCCTTGAAGCAAATCAGTCAAGCCGCTCATCAGTGCGGCGAATGCGAGAAGACTTTCTACAAGGCCAGCGATTTGGAACGCCACTCTCGGACGCATACAAAAGAGAAGCCGTTTGCCTGTGATTTTTGCTGGAAGACATTCGCCCTGATGTCCACTCTGGTGCAACACAAAAAGACCCACGACACCCTGAGGGAGACGTACGATTGTCAGGTGTGCGGCAAGAAGTACACGTCAAAGAAGGTGTTGGTTGTGCACTTGCGACTGCACACCGGGGAACGACCGTTTCAGTGCGGTGTGTGTCAGAAGACTTTCAGGACTTCGGGCCACAAGATTTCGCACATGAAGTCGCATCACAAGAAACGAAAGTAG
Protein Sequence: MQNNTDLFTPAHSIATSTTLLYPLNDGDEKFDAFEMDGFAVPEIDYPTITSLCPIPEETLLDPLFSPVDTVSSDPKSLPCDLCTETFPSAQVLRLHRREKHIATKEFRCSKCPMSFNFESNLTLHMASHVPVQNVDKECPECSMVFKRISSFKGHLKSHQTSDRFKCNRCEKEFDLKGYYEKHMAKAHKPGADGTVEEILAKVENSARIRSKSKKSQGKYLCETCGKSFPKPCLLKRHEVGHTGAKPFKCEQCDQGFTQKTSLERHMLLHQGIKDFKCPKCNAGFSQKNNLIVHIKRTHPVDQNTENMFACEYCPCVFTKLNSVNRHKAMVHADRVNDADNDGFNDEDDDNVNIARVMEQLKSFQESMGIKDMQPPALEMSLMKPPSPGPKVRTVTVVDTLNPKKEKTYKTVKEIEYKGQRTMACNYCDKTFKRQFDLLRHHRIHTKERPFECEICQKNFSTNAALKIHQNIHVSSHDKPAKVYTCAAPECGKRFSSMRRLDIHTKTHTSGISYICPLCSKTFTSKAGFSAHKHQPNDKEFDMIRPLLMQPVNIESNSTDEADKAEEYSKRIHQCYVCGLKMKKLSHLRQHEATHTGDKPYKCTVCFRSYTTQSSLNLHKQIHAAEKPHACEVCNAKFITQSLLKRHMISHSDERKFECPYCGERFKTSDNCKNHILTHGRNLLATPDPPPDDGTLQHVESEGEVIETISQPCIAVVQSEEPYLSPKFIQIEMVKNCKKHNHKNLTIETVPSTPKKSAKRSLARSLKQISQAAHQCGECEKTFYKASDLERHSRTHTKEKPFACDFCWKTFALMSTLVQHKKTHDTLRETYDCQVCGKKYTSKKVLVVHLRLHTGERPFQCGVCQKTFRTSGHKISHMKSHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00672338;
90% Identity: iTF_00671079;
80% Identity: -