Eper009507.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eristalis pertinax
Gene Symbol
sip1
Assembly
GCA_907269125.1
Location
OU026148.1:15041891-15045302[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-94 1.5e-90 303.4 15.8 3 275 394 659 392 659 0.97
2 2 0.43 2.3e+03 -2.3 0.0 159 188 673 701 665 709 0.56

Sequence Information

Coding Sequence
ATGTCGGACAATGAGTATGAAGCGTTCGAGATAACCGACTTTGATTTGGCAAACGAATTCAATCCGAATCGTCCCAGGCGGAAACTGACTAAAAATCAGCAAATTTATGGAATCTGGGCGGATAGCGACAGTGACAATGACAGTGAGGTGGAAATGACCGGTCGCCGGGGCAAAGGCCGAAGTTCTGGTCCAGTGAACTTCGTCACCGGCGGCATACAGCAGTCGAGTAGCCAAAAGAAAGATGAAAAGGACAAAGACGACGACAATCAGATCACAGACGAAGAGGATGAACGTCCATCGCACAGCGGGGTCAAGGATAACGAGGCGAAAAGCTCAAATGAATCGTCAGAGGAAGAGCAAGCGGCCAATCCGCAGCGCATGGGCTTCGGCATGCCTCGACGACCTGCGTCGGGCAGTGGTAAACCAGTTGGTGCATGGGAGCAGCATACGAAGGGCATCGGCGCGAAATTGCTGCTTCAGATGGGCTACAAACCGGGCATGGGCTTGGGCAAGGATCTTCAGGGTATAGCGCAGCCAGTACAGGCGCATTTGCGAAAGGGTCGAGGGGCTATTGGCGCGTATGGACCGGAGACACCCGCAACCATAGGCGACGGCGGCCACACGAAGCTAAAGGAAGACGAGGACACACGGGAGGCGAAGGAATTCAAGGAGAAGCTGAACAAATGGAAGAGGGACGATGGGAAGAAGGACTCAAAGAAGAACCGTTACTATTACCGGTCCGTGGAGGAGGTGATCGAGAAGGGCAAGAAGTCGTCCTGCGGTATAATTCCCGACAAGTTGAGCAAGAAGCTCGGCAATGTGCCGGTAATCGACATGACCGGCCCCGAGAAACGTGTCCTCAGCGGCTATCACGCTCTGGGGCAGGCGAAGATCGTAGACGACGATCTGTTCGACGCACAGGCAAGCAAAAAGTCGACGGGGTTCGCAATGCCCGAACTGGTGCATAACCTCAATCTGATAGTGAATCTGTGTGAGCAGGACATCATTGCGTTGGACAAGACGGAGCGCGAAGCAACAGACAAGCAGGATGCACTAGAGCACGAGAAGCGAaacctggagaagatcgtgaaGCTGGAGAAGGATCACATTGATACACTCGAGAGAGCGCTGGAGCTGGTGGAAGAGCTCTCGGCCGGAACAGATGACTTGAATCTACCTCGGGCGGAGAGCATTTTCATTGAACTCCAGCGCGACTTTGCCGCTGAGTACAAGGAGTTCGCTCTGGGCGACCTAGCAGCTGGAGTCATAGCTCCCCTTGTCAACCACGAGCTCAGGTCGTGGAGGCCACTTGAAGAGCCCACGAAATTCGTCGACACCATCAAGAAGTGGCGAACCATTCTGGATATGCACCAGTCGGAGGAGCGAAACAACGTCTTTGACCCGTACTCGTCGCTCGTCTGGGCGGGAGTGATTCCCAGTTTCCGGTCCACCGTGAACGCATGGAATCCGAAGCAGCATCAGAAAATGGCTGCACTCCTGGACAGCTGGGCTCCGCTGTTTCCCACTTGGGTGCTGGACAACGTGCTCGAACAACTAATCCTGCCGCGGCTTGTCAATGGCGTCAAGGAGTGGGATCCGCTTACAGACACTGTCCCCATCCACAGCTGGATACTGCCGTGGCACACGATTCTGGGCCACAAAATGGAGGAGTTCATCTTTCCGACGATCCGCGAAAAGCTGGGCTGCGCGCTGCAAGCTTGGATGCCTCAGGATCGATCGGCAAGAGCCATGCTCACGCCGTGGAAGGAGGCATTCGAAGAGGCCGAAATGCAAGCCTTCCTCCTGAAGCACATCATTCCGAAACTCCAAATGGCACTCAACGAGATGACCATCAACCCGCTGCAACAGGACTTAGaacTTTGGAACCAAGTGTGGGAATGGAATGAAGTGGTGCCTTCCACGCTAATGGGCCAGATTCTCGACAAGTACTTCTTCCCCAAGTGGATGCAAGTGCTGGTGCTGTGGCTCAACCAGTCGCCAGACTTTGATCAAATCTCACGATGGTACACCGGCTGGAAGACAGTTCTCGGCGATGAGCTGCTGAAGCAACCCATGATCAAGGAGCACCTGCGACGCGCTCTGGAAATAATGCAGAGGGCAACGGAAACGGTCTCGTCCGCAATGCCAACACCAACCCCGGTTGCGCCGCCACAAGTTGCCGCAGTTGGTGCGACATCAGCGGTCCCACCGGCGCTGATGGATCTGCAAATAGCTCCGCCAACGCAGTTGGAGTTCAAGGAGCTCGTGTCTCAGAAGTGTGCCGAGCGTGGCATCATCTTCGCGCCCATGCCGGGCCGCAGAGAGTTTGGCAAACAGGTCTACCGAGTCGGGAAACTGTTCTGCTACATCGATCGGAATGTGGTGTTGTTGAGCGATGGCAACCTGAAGAACTGGACCCCCACCTCCCTGGGCTTGACAATAGAGAGAGCTGTGTCTGGTTGA
Protein Sequence
MSDNEYEAFEITDFDLANEFNPNRPRRKLTKNQQIYGIWADSDSDNDSEVEMTGRRGKGRSSGPVNFVTGGIQQSSSQKKDEKDKDDDNQITDEEDERPSHSGVKDNEAKSSNESSEEEQAANPQRMGFGMPRRPASGSGKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQAHLRKGRGAIGAYGPETPATIGDGGHTKLKEDEDTREAKEFKEKLNKWKRDDGKKDSKKNRYYYRSVEEVIEKGKKSSCGIIPDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKIVDDDLFDAQASKKSTGFAMPELVHNLNLIVNLCEQDIIALDKTEREATDKQDALEHEKRNLEKIVKLEKDHIDTLERALELVEELSAGTDDLNLPRAESIFIELQRDFAAEYKEFALGDLAAGVIAPLVNHELRSWRPLEEPTKFVDTIKKWRTILDMHQSEERNNVFDPYSSLVWAGVIPSFRSTVNAWNPKQHQKMAALLDSWAPLFPTWVLDNVLEQLILPRLVNGVKEWDPLTDTVPIHSWILPWHTILGHKMEEFIFPTIREKLGCALQAWMPQDRSARAMLTPWKEAFEEAEMQAFLLKHIIPKLQMALNEMTINPLQQDLELWNQVWEWNEVVPSTLMGQILDKYFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTVLGDELLKQPMIKEHLRRALEIMQRATETVSSAMPTPTPVAPPQVAAVGATSAVPPALMDLQIAPPTQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVLLSDGNLKNWTPTSLGLTIERAVSG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01542208;
90% Identity
iTF_00672839;
80% Identity
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