Esep005987.2
Basic Information
- Insect
- Eristalinus sepulchralis
- Gene Symbol
- -
- Assembly
- GCA_944738805.1
- Location
- CALYJE010000040.1:1080415-1096351[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-11 4.6e-08 32.7 0.0 1 38 245 283 245 288 0.89 2 4 2.2e-13 3.9e-10 39.4 0.1 2 39 300 337 299 340 0.94 3 4 2.5e-18 4.3e-15 55.2 0.0 1 45 354 399 354 399 0.98 4 4 1.2e-19 2e-16 59.5 0.0 1 42 406 448 406 451 0.96
Sequence Information
- Coding Sequence
- ATGACCAGCCTAGGAATGGGAATGAACGGTGGTCTCCTCGGAGTACCGATGGGCTTTTTAGATTTCGCGCCCGAACCACCAGCACCATCTGCAACGCCAGTAACAGTGACGGAACATGTAGACTTGTCTTGCAATCCCAGTACGGACACCAGAGACTTATCAAATCCCACCGAAGCGCTCGATATTAACAATCATTTAGCACAACACATGATCCAACGGCTTGATCAATCACCAATGCATACGATCCACCATCAGTCGTCCACCGGcgatgagagcaactccaatttaattcaacacattaaaagtgaagtgattgaagtgaaacaacaacagcatcatcatcagcagcagcagcaacagcaaatgcatgcgcaaacattatcacagcaaggacaatctcaacagcaacagcaacagcagcaacatcaacaacaacaacagcagcaacaacatcagcaacaacagcaacaacatcaacagcaacatcaagacatttcgggagcaactgttatggaaattgatccaaataatATAAAACATGAACCAGGAATGATTATCACACCGGAAATCGTCACCATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGCGAGGATTCGTTGATGATTGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACAAATTTGGACCAACCACATGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGTTTGACGAAAGCCTCTGTGACGTATGGCATCCCATCGACAACATTATGGCAACGTGCCCATCGTATGGGTATTGAAACACCCAAAAAGGAGGGCGGTACCAAATCATGGAATGAAGATTCATTAAATAGTGCACTTGAGGCATTACGAACTGGTCAGATATCAGCAAATAAAGCCTCTAAAGCATTTGGTATTCCGTCCTCGACTTTATATAAAATTGCCAGACGCGAAGGTATACGATTGGCAGCGCCATTCAATGCGGCGCCTACTACTTGGACGCCAGAAGATTTAGAACGTGCACTTGAGGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCCAGTTCTGAATTTGGCATACCGACAGGTACGCTGTATGGTCGCTGCAAACGTGAAGGCATTGAATTGTCGCGTTCAAATCCAACACCGTGGTCCGAAGATGCTATGAATGAAGCATTGAACTCTGTAAGAGTTGGACAAATGTCGATTAACCAAGCGGCTATACATTACAACCTTCCCTACAGTTCCCTATATGGGCGTTTTAAACGTGGTAAATATGATATAGCCAATACAAGTGCAACATCAATCAATAACACATCCGGAAATACAAGCGGTAGCATTGAAATTATTGAACACAGTCCAGAGAATTCGTTACACATGTTTCAGCAACaattccaatatagtccagcgccgcaatcaaatcatcaaactcaacagcagcaacaacaacaacagcaacaacagcagcaacaacagcaacaacaacagcaacagcatcaacaacatcagcaacaaccacaacacatccatcaacacgttgtacacattcagcaacaacaaacaccacatcatcatcaacaacaacatatccaacaacaagatgttgttacctcaacaagtcaagtacatgcccaagCCGGGCAAATCCAACAGATCTATCATCATCACAGCACCCCCGAGAGGAGTTGA
- Protein Sequence
- MTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDINNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQQHHHQQQQQQQMHAQTLSQQGQSQQQQQQQQHQQQQQQQQHQQQQQQHQQQHQDISGATVMEIDPNNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSATSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQHQQHQQQPQHIHQHVVHIQQQQTPHHHQQQHIQQQDVVTSTSQVHAQAGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356763;
- 90% Identity
- iTF_01253442;
- 80% Identity
- -