Elan012212.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eriosoma lanigerum
Gene Symbol
TFIP11
Assembly
GCA_013282895.1
Location
scaffold:40491137-40498015[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.32 4.5e+03 -2.4 0.0 137 156 287 305 282 326 0.73
2 3 4.3e-76 6.1e-72 243.1 19.2 4 275 387 652 385 652 0.97
3 3 0.26 3.6e+03 -2.1 0.1 234 260 656 682 653 694 0.65

Sequence Information

Coding Sequence
ATGTCTGACGATGAAATGGAAAAATTTGAAATAACTGACTATGATTTGGACAATGAGTTTAATATAAATAGACCTCAGCGACGATTGACCAAAAATCAAGCAATTTATGGAGTTTGGGCTGACGAAGAAGGTGATGGTGATAGTGACAATGAACCATCAGGTTTTGGAGGCCGTAGAAAGAAGGATAAGAAACATAAACAAAATTACACTGCTCCTGTTTCATTTGTAGCAGGAGGCATTCAACAATCAGGCAAAGATAAAAAGGAAATAAAAGCTGAAGAAAATAATGATGATGAAACAGATAATTTGGATGGACATATATCAACATCTAGTGAAGAAGAAAAACCAACATTTAGTTTTGATATAGATCAAGAATTAGCAGGTTTACGGAAAAAACGATCTCAAGTTAATCCGAGAATTATGAACAGAGGTTTAGGAGATTGGGAGAAACATACAAAAGGAATTGGTGCAAAACTATTACTTGGAATGGGTTACCAACCTGGTCATGGTTTGGGAAAAAAACTTCAAGGCATTACAGCTCCAATTGAAGCAAATTTAAGGAAAGGAAGAGGAGCAATAGGGGCTTATGGTCCTGAAACTAAAAGTAAACCAATGAAAGTGGATAGTGAACGCACATCAGAAAAATTGAAAGATAATAAAGCTCCAACACATGGGTGGAGAAAAGCATTGAAAACAGAAAAAACTCAATACATTTATAAAACTGCCGAAGAAGTAATTGAAGAAAGTAAACATCCTGGGCAAAGGAAAAGAGAGTTCAATGAACTAAGTAGAGTAAAAGTAATTGACATGACTGGTCCAGAACAAAGAGTTTTATCTGGGTACCATGCTATTTCTGGTGTTAAGAAACCAATTGATCAATGGGAAATAAGAAAAGATAAAAAGTTCTCTAATTTTGATTTACCTGAATTATTACATAACCTTAATCTTTTAGTTGAAATAGCTGAACAAAATATTATAACAAACAATCAAGAACTTTGTAATTGCGAGGATCGGTTAATTGTCATTGAAGAAGAAACCAGTAAATTAGGAGAAGATTTAAATGATAAAGATAAATCAATTGAATCACTTGAAAATATGATCATTGTTATGGACTCTTTAAATGATTCATTAAAAAAAAATATGTTGGATAGTAATCAAGCTATAAAAAGTTTAACAGAAATCAAAAACAATTATTATGCAGATTATCGATTAAATGGTGGATCCGTTCTGGCATTATCGATTTCACAAATATTAATGAAAGAAAAATTATCTACGTGGGACCCATTACAAGATTCAACTATGCCTTTCGAAGAACTTAATAAATGGAAAGAGTTATTAACTTTAAATGAGCCATGTGCTGTTGGGTTTCAATCAAGTGAGGAATTTCAAACATTAATATGGCAGGAATGGGTACCCCAAGTTCAAAAAGCCTGTGGGCGATGGAAATGTCGAAATTATAATAGCATGTTGAAACTTGTTGAACAATCAACTGAATTAATACCAATTGACATTATTAATAGAGTTCTTGAAAATATGATTTTACCAAAAATTCAATTTGAAGTAGAACAATGGGATCCATTAACTGATCTTGTACCAATCCATTTGTGGATTCATCCATGGTTACCGTATTTAAGTAAACATTTTGAAACAATTGTCTATCCTACACTAAGACAAAAATTAAGTGTGGCTTTAAATGCTTGGCATCCATCTGACAACTCAGCTAAACTCATGCTCCAACCATGGATAAATGTTTTCCAGCAAGGCTACATGGAAGCTTTTTTAATCAAAAATATTGTTCCTAAATTGCAAGCTGCTTTACAAGCTTTTGTAATCAACCCACATCATCAACAATTAGATAATTGGAATTGGGTAAATGCATGGTCTGATTTATTACCAATACCTACATTAGTAGAACTTTTGGATCAACATTTCTTCCCAAAATGGCTCAAAACACTTACTATGTGGATAAATATGAATCCTAATCATGAACAAATAAGCAACTGGTATACAGGATGGAAGTCTTTAATGCCTGCTATTATTGTTGAACATCCTACAATAAAAGGGCGATTTCATTCTGCTTTGGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACTACCACCACCACCACCAACAATTCACGGTGGTCTTGCTGAAGCTGTACGTACAGCATCTCAAATGCCTCATGGTTTTAAGGAGTTAGTGCAGAAACGATGTGAAGAACGAGGTATTTTATGGATGCCTCTTTCTGGTCGCTTTAGAGAAGCTAAACAAGTATATCGTTGTGGAGCAAGACTTCAAGCATATATTGACCGTGGAGTTTTATTTGTAAGTCAAGATGGTACAAATTTTGCTCCGATGTCTATACAATCCATGTTGGAACTATGTGAATAA
Protein Sequence
MSDDEMEKFEITDYDLDNEFNINRPQRRLTKNQAIYGVWADEEGDGDSDNEPSGFGGRRKKDKKHKQNYTAPVSFVAGGIQQSGKDKKEIKAEENNDDETDNLDGHISTSSEEEKPTFSFDIDQELAGLRKKRSQVNPRIMNRGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGITAPIEANLRKGRGAIGAYGPETKSKPMKVDSERTSEKLKDNKAPTHGWRKALKTEKTQYIYKTAEEVIEESKHPGQRKREFNELSRVKVIDMTGPEQRVLSGYHAISGVKKPIDQWEIRKDKKFSNFDLPELLHNLNLLVEIAEQNIITNNQELCNCEDRLIVIEEETSKLGEDLNDKDKSIESLENMIIVMDSLNDSLKKNMLDSNQAIKSLTEIKNNYYADYRLNGGSVLALSISQILMKEKLSTWDPLQDSTMPFEELNKWKELLTLNEPCAVGFQSSEEFQTLIWQEWVPQVQKACGRWKCRNYNSMLKLVEQSTELIPIDIINRVLENMILPKIQFEVEQWDPLTDLVPIHLWIHPWLPYLSKHFETIVYPTLRQKLSVALNAWHPSDNSAKLMLQPWINVFQQGYMEAFLIKNIVPKLQAALQAFVINPHHQQLDNWNWVNAWSDLLPIPTLVELLDQHFFPKWLKTLTMWINMNPNHEQISNWYTGWKSLMPAIIVEHPTIKGRFHSALDIMSRAVGGPSMPLPPPPPTIHGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPLSGRFREAKQVYRCGARLQAYIDRGVLFVSQDGTNFAPMSIQSMLELCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01037788;
90% Identity
-
80% Identity
-