Epel030308.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_011428145.1
- Location
- WOFM01001468.1:90412-111603[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-92 5.8e-88 296.0 33.0 1 300 30 338 30 338 0.88 2 2 0.05 1.7e+03 -1.1 6.8 122 172 338 388 336 412 0.76
Sequence Information
- Coding Sequence
- ATGGACAGTTACACTATCGGCGGTCGAAAAAGGGCACCGAGTAATCACACCGTGGAGGATCAAGCATTGGATCAAATTGCAAAACAGGCTGAATGTCGACTCGCAGCTCGTCGTCAAGCTCGTGCCGAGGCTAGAGAAATTCGTATGCGTGAAATCGAACGACAGCAACGCGAAGCCGAAGAAAATGCCGACAAAATATTCGACATGCACAACGCCGTAGAATCAACCAGTCGCATGCGGAATTCTTCCTGTGTAAATAATCGCAGCACCTCTATGATTGCGTCGCCAATGAGCAACAATAGTAGACGTAGTTCGGAAGATTCTTTAGAAGAATCAATTAACTATCGCGATGTTAAGCAAGAGCTCAAAGagcttgaagaaaaatttcgcAAAGCGATGATCCAAAATGCGCAGCTTGATAACGAGAAATCGGCGATCTCCTACCAAGTAGAGTTGTACAAAGATAAATTCCAAGACCTAGAAGCAGCGTATTCCGTATTGCAGAAAGAACATCGTGACAAGTGTAGGGAACACGAACAATTAAAAAGACTGTACACGAAACAAAACGAAGACCTTGCATTTTTCAGATCCCAGTTAGAGGAACGTGATAGACTAATAGAGGAACAAGGTTTAGTTGTGATAACAAACGGGGACGACGGTTTCCACAATTCGCTCGACGAAGACCAAACAAACGATAGCAATCACGTCGATTATAAGAAGAAATTATCGAATCGTATTTTAATATCGTCGCAGTCGGCCGACCTGTTGCAAAATTTGGGCGAAGGTTCCTTAGATAATAGATTAAAGAAGTATGCTCAAGAGCGAAAAGATTTACTCGATGAGATAGCGAAGTTGAAATTCGACTTGGAAGAAGAACGTATTAAATCATCCGGCAATTGCTACAGTATGATGAATGGTTCGGATAATGAAGATTTCGATGAATCGAGAGAGACTTCTCGACTAGTCGgtgattataaatttaaatggCAAAAGGCTGAACAAGACATATCAACGTTACAAGCTAATgttgcCAGACTAGAAAGTCAAGTTATTAGGTATAAGTCAGCTGCTGAAACTTCGGAAAAAATTGAAGACGAATTAAAAGTTGAGAAGCGAAAACTGCAGCGTGAACTGCGTGAAGCGCAGTCAAGGGTTGAAGAACTCGAAACAGCCAATATGCATCTACAGAGACGTTTAGATAAACTGAAAAACGCCAAATCAGCATTATTGAAAGAAATATGA
- Protein Sequence
- MDSYTIGGRKRAPSNHTVEDQALDQIAKQAECRLAARRQARAEAREIRMREIERQQREAEENADKIFDMHNAVESTSRMRNSSCVNNRSTSMIASPMSNNSRRSSEDSLEESINYRDVKQELKELEEKFRKAMIQNAQLDNEKSAISYQVELYKDKFQDLEAAYSVLQKEHRDKCREHEQLKRLYTKQNEDLAFFRSQLEERDRLIEEQGLVVITNGDDGFHNSLDEDQTNDSNHVDYKKKLSNRILISSQSADLLQNLGEGSLDNRLKKYAQERKDLLDEIAKLKFDLEEERIKSSGNCYSMMNGSDNEDFDESRETSRLVGDYKFKWQKAEQDISTLQANVARLESQVIRYKSAAETSEKIEDELKVEKRKLQRELREAQSRVEELETANMHLQRRLDKLKNAKSALLKEI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150345;
- 90% Identity
- -
- 80% Identity
- -