Eoch013702.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451393.1:8262528-8264341[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 8.6e-07 29.6 0.0 4 39 14 49 12 54 0.91
Sequence Information
- Coding Sequence
- ATGGCTACAAAACGAAAATATTATGCGTGGAATGAAGTAAGCATGAACCTAGCCATTGAATCAGTGCGTAAAAATAAAGCAGGTTTGAATGAGGCAAGTAGGATGTATGGAGTGCCTAAAGCCACACTAAAACGAAGATTGGATGGTGTGAATCAAAAGGCTAAGGAACACGTTCAAATAGTAGGATCTGAAGGTGATCTTCCGTCAGAATTGGAAACCGAATTATGTCAACACATCCTCGAGATGGAAAGTAGTTTGTATGGTGTAACGCCTTTCGATATTCGGCAGCTGGCATTTGAACTGGCAGAAAAGAACAATATCAAAAATCGATTTAACAAAGAGAAAAGAATTGCAGGTAAAAAATGGTACTATGCGTTCATGAAGCGGCATCCACAATTAAGTTTGAGACAACCAAGAGCAACTTCAAAGAGCCGGGCTACTGGATTTAACAAACCTGCTGTAACCGATTTCTTCAATAAATTAGAGGCAGTATGcgaaaaatacaacataacagaaGCGCAGCGTATCTTCAACGTTGATGAGACGGGCTTGTCAACTGTCCAgaggaaaacaagaaaaatactgGCATTAAAAGGTAAGCGGCAAGTTGGAGCTATTACTAGTGGAGAACGAGGTACAAATACTACAGCCGTATGTTGTGCTAATGCTGCTGGTAATTTTATACCACCGCTTATAATATTTAAGCGCAAGAGATCAAAAGACGAACTCAGGGATGGAGCTCCACCTTTTACAATATTTGCTTTTAATCCAGAGAGTGGATATATTAACaaagacatattttatttgtggttaCAACAATTTATTGAGTCTGTGAAGCCGACATCTGAAAAAAAAGTATTACTTCTGTTAGATGGTCATGCTAGCcatacaaaaaatttaaaagctaTAACATATGCCAAGCAACACGGCGTCGTTTTGCTTTCATTTCCAGCACATACAACACATAAAATGCAACCGCTGGATGTCTCCTTCTTCAAGCCGTTGAGCCTTTACTATATAGATGAAACAGAAAAATGGTTGCGCCAAAATCCTGGAAGAACTGTGACAATGTTTCAAGTTTCAATGCTATTCGGAAAAGCATATTCCCGAGCTGCATCTGTTGGAACTGCTACAAGTGGCTTTGCAAAGACTGGAATTTGTCCTCTTAATAAAGATGCATTTGCTGACTACGAATTCATTGTACCTGAAAAAGAAAACGATGAGATTTCACCACCAATTGTATTAGACTTACAGGATGATATAGATCCACTATCTTTGAATATTTCTTTACTAGAAGAGAATCTAGAAATTGAAACCTTAGCGGTATCACAGAATATTGATTGTAGTACAGCTGAATCAAAGGCACGCAATTTCGAATTCACAATAAACCAAATATCTCCTGGAGCTAAAAAAGTAGCACAAGAGTTAAGACAAAGGAGTAAAAAAGCACAAAGTAGCTTGGAACTGACGTCGACGCCTTATAAAACCACTTTAGAACAAGCTATTGTAAGGCCTTCAAAACCGAAAAAGCCGAAATTTACTGCAAAAGAAACTgcattttctaaaaataaaataactgatgAGCCAGAGCCATCAACAAGCAAAGATGCCAAATCAGTAAatatcgaaaaatggttttgcaAAATCTGCCTACTGTGTGCAGTTGAAGACATGATTCAATGTATGATGTGTAAAGCCTGGGTTCATGTAGATTGTGCCTGCGTTAAGAAAACTATTAAGAAGTATTTATGTCCTCAATGCAAATAa
- Protein Sequence
- MATKRKYYAWNEVSMNLAIESVRKNKAGLNEASRMYGVPKATLKRRLDGVNQKAKEHVQIVGSEGDLPSELETELCQHILEMESSLYGVTPFDIRQLAFELAEKNNIKNRFNKEKRIAGKKWYYAFMKRHPQLSLRQPRATSKSRATGFNKPAVTDFFNKLEAVCEKYNITEAQRIFNVDETGLSTVQRKTRKILALKGKRQVGAITSGERGTNTTAVCCANAAGNFIPPLIIFKRKRSKDELRDGAPPFTIFAFNPESGYINKDIFYLWLQQFIESVKPTSEKKVLLLLDGHASHTKNLKAITYAKQHGVVLLSFPAHTTHKMQPLDVSFFKPLSLYYIDETEKWLRQNPGRTVTMFQVSMLFGKAYSRAASVGTATSGFAKTGICPLNKDAFADYEFIVPEKENDEISPPIVLDLQDDIDPLSLNISLLEENLEIETLAVSQNIDCSTAESKARNFEFTINQISPGAKKVAQELRQRSKKAQSSLELTSTPYKTTLEQAIVRPSKPKKPKFTAKETAFSKNKITDEPEPSTSKDAKSVNIEKWFCKICLLCAVEDMIQCMMCKAWVHVDCACVKKTIKKYLCPQCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784336;
- 90% Identity
- iTF_01264417; iTF_00147299; iTF_01029196; iTF_01093967; iTF_01085105; iTF_00783378; iTF_00448979; iTF_00783379; iTF_00448980; iTF_01264436; iTF_01264413; iTF_01264414; iTF_00043421; iTF_00147296; iTF_00147298;
- 80% Identity
- -