Basic Information

Insect: Epistrophella euchroma
Gene Symbol: -
Assembly: GCA_947049305.1
Location: CAMRIP010000126.1:2210743-2212227[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.63 78 4.8 0.2 2 23 86 107 85 107 0.92

2 13 0.00011 0.014 16.6 0.5 1 23 155 178 155 178 0.98

3 13 0.00056 0.069 14.4 4.1 2 23 187 208 187 208 0.97

4 13 2.3e-06 0.00028 22.0 2.3 1 23 214 236 214 236 0.99

5 13 1.3e-06 0.00016 22.7 0.5 1 23 242 264 242 264 0.99

6 13 0.00012 0.015 16.5 4.6 2 23 270 291 269 291 0.96

7 13 3.3e-06 0.00041 21.5 1.8 1 23 297 319 297 319 0.98

8 13 9.1e-06 0.0011 20.1 1.5 1 23 325 347 325 347 0.99

9 13 2e-05 0.0025 19.0 2.5 1 23 353 375 353 375 0.99

10 13 5.5e-06 0.00069 20.7 1.1 1 23 381 403 381 403 0.98

11 13 3.6e-07 4.5e-05 24.5 0.3 1 23 409 431 409 431 0.98

12 13 3.5e-06 0.00043 21.4 1.0 1 23 437 459 437 459 0.98

13 13 1.2e-05 0.0015 19.7 0.3 1 23 465 488 465 488 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.63	78	4.8	0.2	2	23	86	107	85	107	0.92
2	13	0.00011	0.014	16.6	0.5	1	23	155	178	155	178	0.98
3	13	0.00056	0.069	14.4	4.1	2	23	187	208	187	208	0.97
4	13	2.3e-06	0.00028	22.0	2.3	1	23	214	236	214	236	0.99
5	13	1.3e-06	0.00016	22.7	0.5	1	23	242	264	242	264	0.99
6	13	0.00012	0.015	16.5	4.6	2	23	270	291	269	291	0.96
7	13	3.3e-06	0.00041	21.5	1.8	1	23	297	319	297	319	0.98
8	13	9.1e-06	0.0011	20.1	1.5	1	23	325	347	325	347	0.99
9	13	2e-05	0.0025	19.0	2.5	1	23	353	375	353	375	0.99
10	13	5.5e-06	0.00069	20.7	1.1	1	23	381	403	381	403	0.98
11	13	3.6e-07	4.5e-05	24.5	0.3	1	23	409	431	409	431	0.98
12	13	3.5e-06	0.00043	21.4	1.0	1	23	437	459	437	459	0.98
13	13	1.2e-05	0.0015	19.7	0.3	1	23	465	488	465	488	0.96

Sequence Information

Coding Sequence: ATGGCTGGCGAGTTAACACAAATCGAATTCTCAAATTTGGTCAAGGACGGCAACTGCACCTTTACGGACTGGCCAGATGAGAACGACGTGGACGAAGATTGTCATGTCAATGGGGTTTTAATGACTGAGGATATGATTAAGCAAGAGCCTGAACTATTAGTTGACTTAAACAATCCCGATGAAGAGCACAAAATACGTTCATTCCTAAAGAAAACGATAGTCGATGATGAGGAGAGGAAACAACTTAATTGGCTAACTTGTCTGCTCTGCGACGAGCGTTTTCTTTCCACCAAAGAACTGTCACTACATGTACTAGGACACACAAAATCCGAATTGAAAGAAGATCTTCCAAAGGAACTAACCAACCGACAAGCACCAAAAACTCAATACACTGGATTCTCGAGGCAGGAATTACTGCAAGACTATGTAAATATAGCAGTCGAACTAGATGGAAAGGCTACATATACCTGCAAACTTTGTCCCAATAAAGTTTTTGCCCGACAGGTGTCTATACGAAACCACATGAGGATCCACGAGAATCCCAAGTATAAGGAACGATCGTGCCATGTCTGCCATAAGACGTTCCTTAGGCGAGATACGTTGTTGGTCCACTTAAGAGTTCACAGCGATGAACGAAAGTACAAATGTGATATTTGTAAGGCCTCTTTCACACATTCCAGTTCCCTAGTCTCGCACAAACGGATCCACACTGGCGAAAAACCCTACGTGTGTTCTATCTGTAGCAAGGCGTTTCGCGAGTCTGGCCAGCTAACTGCTCACAAAAAGACccattttgaaaagcttttaCAATGTCCCAAATGTGACAAGAAGTTCACCTCCAATAAAACCCTTCGCGGTCACTGCCGTACGCATACCGATGAGCGTCCGTATGCGTGTTCATTCTGTTCAAAAATGTTTCGTTCCAGTACAAGTCTGACGACTCATCTGCGAGTGCACACAGGTGAAAAGCCGTACAAATGCGAAATATGCTCGTATGCAACCAAACAGTCCGGCTACATGCGAACGCACATGCGAACCCATACCGGAGAGAGACCCTACAAATGTTCTTATTGCGATAAGGGATTCTCGGAGAGGAAGCGTCTGGTGACGCACACCCGAAGTCATACTGGTGAACGTCCATACAAGTGCATATATTGCGATTCAGCATTCGCTCGGAATGATAACCTCAAGTATCACATGCGAACGCACACTGGTGAGCGGCCGTTCGAATGTGCTGATTGTGGAAAACGATTTACCCAACGTACAGCACTTCTAGTTCATCAAAAGATTCACACCGGTGATAAGCCCTATTCTTGCCCCCATTGCGACATGAATTTCCGCCAAAGCGGAACCTTGGTCACTCATTTGCTAATGCACACAAACGAGAGACCATTTAAGTGTGATCTCTGCGAAAGGGGATTCAGACAGAGGGCTTTGTTAAAGCGACATGTCGCCAGTGCGCATGGAGCTGTTATTGATAAGTAG
Protein Sequence: MAGELTQIEFSNLVKDGNCTFTDWPDENDVDEDCHVNGVLMTEDMIKQEPELLVDLNNPDEEHKIRSFLKKTIVDDEERKQLNWLTCLLCDERFLSTKELSLHVLGHTKSELKEDLPKELTNRQAPKTQYTGFSRQELLQDYVNIAVELDGKATYTCKLCPNKVFARQVSIRNHMRIHENPKYKERSCHVCHKTFLRRDTLLVHLRVHSDERKYKCDICKASFTHSSSLVSHKRIHTGEKPYVCSICSKAFRESGQLTAHKKTHFEKLLQCPKCDKKFTSNKTLRGHCRTHTDERPYACSFCSKMFRSSTSLTTHLRVHTGEKPYKCEICSYATKQSGYMRTHMRTHTGERPYKCSYCDKGFSERKRLVTHTRSHTGERPYKCIYCDSAFARNDNLKYHMRTHTGERPFECADCGKRFTQRTALLVHQKIHTGDKPYSCPHCDMNFRQSGTLVTHLLMHTNERPFKCDLCERGFRQRALLKRHVASAHGAVIDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975266;
90% Identity: iTF_00664520;
80% Identity: -