Basic Information

Gene Symbol
Rel
Assembly
GCA_947049305.1
Location
CAMRIP010000142.1:1144489-1148428[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.7e-46 4.6e-42 144.7 0.6 4 168 105 285 102 286 0.92
2 2 0.69 3.7e+03 -1.5 0.0 56 95 427 467 420 477 0.89

Sequence Information

Coding Sequence
ATGCATAACGAAATTTATGATATGGATAAAAAGTTGTGCTTTAGTGATTGTTCGAATTCAATGTCGGTGCCCTCACCCTGTTCGTCACAGTCTTCGATATCCTCGTCGACATCAGGATACTCCAGCGCAAACAATTTACCCCTGATGAACTTTCCCAGATACGATATCAATAACGGTGATATCAATATGACATTTATGCCTTCTCAGAATTTTGATACAACACATTTCACCCAAAGGGTGACAGGAGTCGATCCGAATGCCAATATTCTTATCGATggcaaaacaataaattacacaAGTAAGCTAATTTTACACGAAGAACCCACAGAGAAATTTCGTTTTCGGTATAAATCGGAAATGCATGGCACTCATGGATCCCTCAATGGACAACGTTCagagaaaaacaagaaaaccttCCCCGAAGCCGAGCTGAAGAATTTCACCGGACAAGGAGTAATCCGTTGCAGTTTATACCAAACAAATCTAGACAAACCTTCACCTCATTCCCATCAGTTGGTTGTCCGCAAAGAGGACATTGATGAGTGTGATCCCCACGATGTTTTCGTGTCCCCAGAAAAGGGCTACATAGCCAGATTCGAGAATATGGGAATCATTCACACAGCGAAGAAGAATATTTGCGATGCACTTTATGCaaagaaaaagcaaaaaatgaaattcgaaTTGGGCATCACAGAGCTATCACAGCGCCAAGAGAAGACCTTGCGAGATGAGGCGGAACGTGAGGGAAAACATATGAACTTGAATCAGgTCCGCCTATGCTTTGAAGCATTTAAAATCGTCGAAGGTGGTTGGATAAAAATTTGCGAACCAATTTTTTCCCGCCCAATTAACAACCGCAAAAGTGCTCTAACCGGTGAACTGAAAATCTGTCGACTAAGTAGTGTCGCAGGTTCCGCTGCTGGTGGTGAAGACATCATCCTGCTTGTGGAAAAAGTCAGCAAGAAAAACATTCAAGTTCGATTCTTCGAGATGCGTGATGACGATCTGGTTTGGGAGGCATTTGGTGACTTCTCCGATGCCGATGTGCATCATCAATATGCTATCACAGTGAGAACGCCTCCATATAAAAATCAAGACATTGATAAGAGCGTTAATGTTTCAATTGAATTGGTAAGAAAGAGTGACGATGAACGTAGTATTCCAGTTGATTACCGATACAAGCCGCGTGAGATTGTACTTTCGAGGAAGAGAAGACGCACATCCTATTCCACATCGACTACGTCAAGTGCTGTAAGTTCATCAGAACTTCCCGAACCAGTCGTTACAGGAATGCATCCTCTGGCACCCCATTCACCACAGACCATAAGTCAGGAGTTCAATAAAAGCGAAGAACTGAATGCCCTTTTGGAACCAAGTTCCCATCAAATTTCATTCCAGAGTTACATGCAAAAAGTCGCCATGGACTCGACCGAGCTCGCTCAAAATATCAATCCGGATTTGTTCAATGACCTATGCAATTTGATTGGACCGGATGGTGAACTCCAGACAGATGGTGAAGCACCTTGTAGCAGACAAAGAACAATGTTTTCAGATCCAGCACCAACGTCGATTCAAACAAAGTCCGTCCCAACTCCGCAGCAACCACACCATCCCGCTATGAGGCATCTCATTAGTGCAATCAAGGACAAGAAATCGACACCATACCAAGTTGCAGCAAAAGTTCAAGGCATATTTGAGGATTTTTCTGCCGAAAACGACAATGGCGATACGATAGTTCATGACATGGTGAAGAACGGCCAGCCAAATGATGCGATAATACTATTTAAGATCCTCTCCAAACTCAATTTGACCGACTTGATCTCGCAGACAAATAACCTTGGACAGACACCGCTTCATGCAGCTTGTATGTACGATCAGCCTATGTTCATTAGACCTCTGTTGGGTCTTAAGTGCGACCCTAATGTGCAGAATACTGAGGGCGATACAGCCCTACACATCGCAATCAATGAAAATCTCAAAGAATGTCTTGAAGGTTTTGCGTCTTTCATTTCATCATCCCCAGATGGTGTTAAATTCAATGTCAATTTGGCCAACGATAACGGATTTACTCCTCTCCATTCCGCCATAAGGCATGGCAATCTCAACTTCATTGAGATCCTTCTCACGAAGTGTAATGCCTCAGCGAAGGTTGCAAGTTCCCGCGATGGCAACAATGCTCTCCACTTAGCCATTCAACAACAGAGCCCCCCAATGGTCAAATGCCTACTCAAGCATGGACATATTCAAGTAAATGCTAAAAATCGTTCAGGACACACATCTATCGATTTGGCCAAGACATTAGATGGGAATGTGAAAAAAGAAATCCTAGACTTGTTGGTGACAAAGTTGCCTTCATCGAATATTCCCAATAGCAGTGTGGAAACTCAAACAGCAGATGTAGTCAAAGACGAACCAGACGAAGACAATGACAGTTCAACTGAGGAAGATAATTCACTGAGTTCGGAGAATGATGAACGTAACGAGGAATTACATTTGAAGCGATTACTTCAAGACGAAGCGAATTTACGTCGGTTGGGGGAGATCTTGGATGTTGACAATAAATGGAAGAAACTTGGAAGCGAATTGAAATTGGATCATTTGCTATTTTTATGGCCCAATGGAGAAGCTATGCTTAAGTTTCTTGTTGCAACCGATGATATGAGTGCGATGAAGATTTTAAATGCTATAAAAGCTGTCGATCCAGAAGTTGGGAACAGAGCAATGACcatattaaaaacataa
Protein Sequence
MHNEIYDMDKKLCFSDCSNSMSVPSPCSSQSSISSSTSGYSSANNLPLMNFPRYDINNGDINMTFMPSQNFDTTHFTQRVTGVDPNANILIDGKTINYTSKLILHEEPTEKFRFRYKSEMHGTHGSLNGQRSEKNKKTFPEAELKNFTGQGVIRCSLYQTNLDKPSPHSHQLVVRKEDIDECDPHDVFVSPEKGYIARFENMGIIHTAKKNICDALYAKKKQKMKFELGITELSQRQEKTLRDEAEREGKHMNLNQVRLCFEAFKIVEGGWIKICEPIFSRPINNRKSALTGELKICRLSSVAGSAAGGEDIILLVEKVSKKNIQVRFFEMRDDDLVWEAFGDFSDADVHHQYAITVRTPPYKNQDIDKSVNVSIELVRKSDDERSIPVDYRYKPREIVLSRKRRRTSYSTSTTSSAVSSSELPEPVVTGMHPLAPHSPQTISQEFNKSEELNALLEPSSHQISFQSYMQKVAMDSTELAQNINPDLFNDLCNLIGPDGELQTDGEAPCSRQRTMFSDPAPTSIQTKSVPTPQQPHHPAMRHLISAIKDKKSTPYQVAAKVQGIFEDFSAENDNGDTIVHDMVKNGQPNDAIILFKILSKLNLTDLISQTNNLGQTPLHAACMYDQPMFIRPLLGLKCDPNVQNTEGDTALHIAINENLKECLEGFASFISSSPDGVKFNVNLANDNGFTPLHSAIRHGNLNFIEILLTKCNASAKVASSRDGNNALHLAIQQQSPPMVKCLLKHGHIQVNAKNRSGHTSIDLAKTLDGNVKKEILDLLVTKLPSSNIPNSSVETQTADVVKDEPDEDNDSSTEEDNSLSSENDERNEELHLKRLLQDEANLRRLGEILDVDNKWKKLGSELKLDHLLFLWPNGEAMLKFLVATDDMSAMKILNAIKAVDPEVGNRAMTILKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00187815;
80% Identity
-