Basic Information

Gene Symbol
Rel
Assembly
GCA_951217065.1
Location
OX578272.1:59095116-59099372[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-46 2.6e-42 146.3 0.4 4 168 102 282 99 283 0.92

Sequence Information

Coding Sequence
ATGCATAACGAAATTTATGATATGGATAAAAAACTGTGCTTTAGTGACTCTTCGAATTCAATGTCTGTGCCCTCACCTTGTTCATCACAGTCATCGATATCCTCGTCTACATCAGGATATTCAAGTGCCAACACTCTACAACTAATGAATTTTCCACGATATGATGTGAATAACGGTGATATCAACATGACATTTATGGCAGCACAAAATTACGATTCAACACATTTTGTACAAAGAACAAGAGACACTGCAGACAGCATCCTTGCTAATGCCAAGGGAAATTACACAAGTCAGCTGATTTTGCATGAAGAACCCACAGAGAAGTTCCGTTTTCGTTACAAATCGGAAATGCATGGAACTCATGGCTCTTTAAATGGACAGCGttcggaaaaaaataaaaaaacatttcccgaagcagaattgaaaaatttcaccGGACAAGGAGTTATCCGTTGCAGTTTGTATCAAACAAATCTTGACAAACCATCACCACATTCGCATCAATTGGTTGTACGCAAGGAGGACATCGACGAATGTGACCCACACGACGTATACGTGTCACCCGAAAAAGGTTACATAGCAAGATTCGAGAATATGGGAATTATTCACACAGCAAAGAAGAACATTTGTGATGCACTTTATGCAAAGAAGAAGCAAAAGATGAAATTTGAAATGGGAGGCGGGGAATTATCACAGAGGCAAGAGAAGACTTTGCGCGATGAGGCAGAGCGTGAGGGAAAACATATGAACTTGAATCAGGTTCGTCTTTGTTTTGAAGCTTTCAAAATAGTCGATGGTGGATGGATGAAAATTTGCGAACCGATTTTTTCCCGTCCAATAAACAATCGTAAAAGTGCTTTAACCGGTGAACTCAAAATCTGTCGTCTAAGTACAGTAGCAGGTAGTGCTGCTGGTGGTGAAGATATAATACTGCTAGTAGAAAAAGTCAGTAAGAAAAATATTCAAGTGCGATTTTTTGAAATGCGTGATGACGATTTAGTTTGGGAAGCTTTTGGAGACTTTTCTGATGCTGATGTGCATCATCAATACGCCATAACAGTGCGAACGCcaccatataaaaataaagacatTGATAAAAGTATAGATGTGTCGATTGAATTGGTTCGTAAGAGTGATGACGAACGAAGTACTCCTGTGGATTTTAGATACAAGCCACGTGAAATAGTACTATCTAGAAAAAGAAGGCGCACATCCTACTCAACTTCGACAACGTCAAGTGCCGTAAGCTCTTCTGAGCTCCCAGAACCAGTAGTTGCTGGTAGGCACCCTCTGGCCCAACATTCACCTCAAACTATTAGCCAAGAGTTTAACAAAAGCGATGAGCTGAATGCGCTGTTGGAGCCAAACTATCAGATTTCCTTCAGCAGTTATATGCAAAAAGTCACTGATGACTCAGCTGAACTTGCTCAGAACATAAATCCAGATTTATTTCAAGACCTTTGCAATTTAATTGGACCGGATGGTGAGCTGCAGACAGACGGTGAAGCACTTGTGCATACAAGCAGGCAGAGAGAAAGGATTCCAGTGGAATGTTCTTCGATTTTCGTAAAGTCATCAACCCAGCAACACCATCCTGCTATGAAATATCTGATTTCTGCAATCAAAGACAACAAATCGGGAACAGACAAAGTTGCCGCAAACGTTCGAAGAATATTTGATGAGTTTTCTGCTGATATCGACAGTGGCGATACCATAGTTCATGACATGGTAAAACATGGTCAACCGAATGATGCGATAatacttttcaaaatactttcAAAACTCAACTTGACCGATTTGCTGTCCCAGACAAATAACCTCGGACAGACGTCTCTGCATGCGGCATGTATATTCGACCAGCCTATGTTTATCAGACCTTTGTTGGGTCTCAAATGCGACCCTAACATTCCGGATATTGAAGGAAACACAGCCCTACACATTGCAATTGAGGAAAATCTTAAAGAATGTCTTGAAGGTTTTGCGTCTTTTATATCATCCTCACCAGATGGCACCAAATTAAATGCCAATTTAGCTAACGACAAAGGACTTACTCCTCTGCATTCCGCCATAAGGGAAAACAATCTCAGCTTCATTGAGATTCTTCTGACGAAGTGTAATGCCTCGGCAAAGGTTGCAAGTTCTCGTGATGGGAATAACGCCCTCCACCTAGCTGTACAACATAAGAGCCCCGAAATGGTCAAGTGTCTTCTTCAGCATggcaaaattcaaattaatgctAAAAACCGTTCTGGGCACACCGCCATTGACCTTGCCAAGACATTAGAACcaaatgtcaaaaaagaaaTTCTCGACTTGCTGGCAACCAAACTTCCATCATTGAATTCGAGTAAAAATGTTGAATCTCAGACAATTGATTTAATAAAAGACGAACCTGAAGAAGACAATGACAGTTCAACCGAAGAAGATGATTCATTGAGTTCAGAAATCGAGGAACGTAATGAGGAGTTGCAATTGAAACGATTACTTCAAGATGAGACGAATTGTCGTCGCTTGGGAGAACTTCTTAATGTGGGTAATAAATGGAAAAAACTTGGCAGTGAGCTGAAGTTAGATCATTTGCTGTTCTTATGGCCCAATGGAGAAGCTATGCTAAGGTTTCTTGTTGCAACGGATGATATGAGTGTGACGAAGATTTTAAATGCTTTACAAGCAGTAGATCAAGAAGTCGCAAGTATGGCTACAGCGATGTTGAAAGCatga
Protein Sequence
MHNEIYDMDKKLCFSDSSNSMSVPSPCSSQSSISSSTSGYSSANTLQLMNFPRYDVNNGDINMTFMAAQNYDSTHFVQRTRDTADSILANAKGNYTSQLILHEEPTEKFRFRYKSEMHGTHGSLNGQRSEKNKKTFPEAELKNFTGQGVIRCSLYQTNLDKPSPHSHQLVVRKEDIDECDPHDVYVSPEKGYIARFENMGIIHTAKKNICDALYAKKKQKMKFEMGGGELSQRQEKTLRDEAEREGKHMNLNQVRLCFEAFKIVDGGWMKICEPIFSRPINNRKSALTGELKICRLSTVAGSAAGGEDIILLVEKVSKKNIQVRFFEMRDDDLVWEAFGDFSDADVHHQYAITVRTPPYKNKDIDKSIDVSIELVRKSDDERSTPVDFRYKPREIVLSRKRRRTSYSTSTTSSAVSSSELPEPVVAGRHPLAQHSPQTISQEFNKSDELNALLEPNYQISFSSYMQKVTDDSAELAQNINPDLFQDLCNLIGPDGELQTDGEALVHTSRQRERIPVECSSIFVKSSTQQHHPAMKYLISAIKDNKSGTDKVAANVRRIFDEFSADIDSGDTIVHDMVKHGQPNDAIILFKILSKLNLTDLLSQTNNLGQTSLHAACIFDQPMFIRPLLGLKCDPNIPDIEGNTALHIAIEENLKECLEGFASFISSSPDGTKLNANLANDKGLTPLHSAIRENNLSFIEILLTKCNASAKVASSRDGNNALHLAVQHKSPEMVKCLLQHGKIQINAKNRSGHTAIDLAKTLEPNVKKEILDLLATKLPSLNSSKNVESQTIDLIKDEPEEDNDSSTEEDDSLSSEIEERNEELQLKRLLQDETNCRRLGELLNVGNKWKKLGSELKLDHLLFLWPNGEAMLRFLVATDDMSVTKILNALQAVDQEVASMATAMLKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2