Basic Information

Insect: Epistrophe eligans
Gene Symbol: -
Assembly: GCA_951394125.1
Location: OX596028.1:85248076-85251722[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.1 4.7e+02 2.1 1.8 1 23 218 242 218 242 0.91

2 13 0.077 7.2 7.8 3.9 1 21 248 268 248 271 0.80

3 13 6.9 6.4e+02 1.7 0.5 1 9 276 284 276 286 0.87

4 13 0.26 24 6.1 4.1 1 13 305 317 305 329 0.78

5 13 1.1e-05 0.001 19.9 3.5 1 23 335 357 335 357 0.98

6 13 0.0034 0.31 12.1 1.2 1 23 363 385 363 385 0.96

7 13 3.3e-05 0.0031 18.4 0.9 1 23 391 413 391 413 0.99

8 13 2.6e-05 0.0024 18.8 1.1 1 23 419 442 419 442 0.92

9 13 0.0003 0.028 15.4 2.6 1 23 457 479 457 479 0.98

10 13 7.1e-05 0.0066 17.4 1.8 1 23 484 507 484 507 0.97

11 13 0.00033 0.031 15.3 1.2 1 23 513 535 513 535 0.97

12 13 7e-06 0.00065 20.5 1.8 1 23 540 562 540 562 0.99

13 13 3.1e-07 2.9e-05 24.8 1.9 1 23 568 590 568 590 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.1	4.7e+02	2.1	1.8	1	23	218	242	218	242	0.91
2	13	0.077	7.2	7.8	3.9	1	21	248	268	248	271	0.80
3	13	6.9	6.4e+02	1.7	0.5	1	9	276	284	276	286	0.87
4	13	0.26	24	6.1	4.1	1	13	305	317	305	329	0.78
5	13	1.1e-05	0.001	19.9	3.5	1	23	335	357	335	357	0.98
6	13	0.0034	0.31	12.1	1.2	1	23	363	385	363	385	0.96
7	13	3.3e-05	0.0031	18.4	0.9	1	23	391	413	391	413	0.99
8	13	2.6e-05	0.0024	18.8	1.1	1	23	419	442	419	442	0.92
9	13	0.0003	0.028	15.4	2.6	1	23	457	479	457	479	0.98
10	13	7.1e-05	0.0066	17.4	1.8	1	23	484	507	484	507	0.97
11	13	0.00033	0.031	15.3	1.2	1	23	513	535	513	535	0.97
12	13	7e-06	0.00065	20.5	1.8	1	23	540	562	540	562	0.99
13	13	3.1e-07	2.9e-05	24.8	1.9	1	23	568	590	568	590	0.98

Sequence Information

Coding Sequence: ATGGAAATTAAATGTAAGTTCAAATCTACAGACCAATTGATAAGTAAATACAAATCTCTTCGTCAGATATCTGAAGATGATAGCCTGCCtcaaaaaatgtgtaaacaatGTGTTGGCAAATTCACCCTCGTCCACAGTTTTCGAAAGCAGTGCGAAAACATTCAAAGTGCATTTAAAATACTCCTACTCGAGCAACGTAGGATAAGATCAACTGAAAAGATAGATAAATACCCATCTAAATCTGAGAAGCTACTTCATGTACAGCCAAAATTAGAGGAGCAGCTGGCCGTTAATGAGATTCAAGCCTTCGAATGCTTTGACGAGATTCCTTTCGAAGATGGAGAGTTCAAAAATGTTCAGTACTTTGAGCTCGAACCCCACAAACCAACGGACTCTAACTgcgaaattttcaaagaaaattcgtCAGAAGGAAAAACAGAAACCCCAACGCCACCAATGGATAATAGATCGGATATATTTTATGATGACGCTAATGGCGATGGATGCATCGATGACGATTGGAATACAATATCGGAGGACGTTGTTCCAAAATTAGAGCGCAACGATGATGAATCAAGTTTGGATTCGGATTTACTAAGCTCGGATGATGAACGGAAACTAAACCGTAAGAGCAAAGTAAAACCCAATCAATTCAAATGTGAGTTTTGCAAAAACTTCTGCCTGGAAAACCAAGAGGACCTAGACAATCATGTGAAAGAAATCCATTCAACTGAGACCCCTTACACATGCTCTCTCTGTACAAAAACCTTCAGCAATGCCAAACAACGAAATTGCCACTTTATGGTGAGTCATAAGTGGAAGTCGCACGAATGTGATGTTTGCCACAAAATGATAAAAGGTGGGAAGCCAGGTCTGAAGAACCACAAAGACAACGTCCACAATAAATCTGACTACGAGTGCAACATatgtcataaaaagtttgaaaacatCTCCTTGAGTCGGTTTAGATATCATTTGCGATGGCATGATAGTTCCAAGCTATTCTCGTGCAAATCTTGCGAGAAAAGCTTTGTCACCCGATATCATCTAGAAGAACACGAACGTACGCACACCGATGAAAAGTCCTTCTTGTGTAATATATGCGGTCTAGGATTGCGGTGCAAGCAGAATTTGATTTGGCATATGAAGACACATACAGGAGAAAGGACGTATCAATGCAATCAGTGCAATAAAGcCTTTCCAACACCAACTGCGCTGGCGTGCCACATTAAAACTCACAGCAATGAAAAAAAGCACGAATGTGAAATTTgcaataaactatttaaaacaaaaggaaGCCTCAAAACGCATATTGGTAATGTACACAAAGTCGATTTTAATGATGGAACTCCAAATTCATCGCCCCGCTATTGTTGTCAATTGTGCCCAAGAAATTTCATATTTGAACGCGATCTCATTAAGCATTTGAAAACTCACGAACATAGACGACACGTTTGTGAGGTATGCGGACTGTCTTACCTACAGTCCTCCCACCTGAAAAAGCATATGGATACAGTGCATCTGAACATTAAGCCTCATGTATGTGCTATTTGTGGACATGCTTTTCCCTTTGAATTTAATCTCAAACAGCACGAGCTTACACATAAAGaaaaaggaTTTAAGTGCACTGTGTGCGATAAAGCATTTACGTTGCATCCATCACTGGTGTCACATCAGAGAACTCACACCGGCGAAAAGCCCTACCAATGCCATATATGTGAAAAAGCATTCACAAATAGAGGGAATCTTAAAAgTCATGTTGAGAAGCATTTGATAGAACAGAAGCAAAATCAAACTTTTACGCAAATTGTCCTACCAGTTATCCCTGCCTCTGCAGATGTTCCGCAACCATCAGAACTCAATATCTTTGATATTAATAGTTCTTGTGATCAAACAGAGCAGCAAGATTTTAGCAATCAATTAATCAATCAATGTGAACTAGaaacattgaaataa
Protein Sequence: MEIKCKFKSTDQLISKYKSLRQISEDDSLPQKMCKQCVGKFTLVHSFRKQCENIQSAFKILLLEQRRIRSTEKIDKYPSKSEKLLHVQPKLEEQLAVNEIQAFECFDEIPFEDGEFKNVQYFELEPHKPTDSNCEIFKENSSEGKTETPTPPMDNRSDIFYDDANGDGCIDDDWNTISEDVVPKLERNDDESSLDSDLLSSDDERKLNRKSKVKPNQFKCEFCKNFCLENQEDLDNHVKEIHSTETPYTCSLCTKTFSNAKQRNCHFMVSHKWKSHECDVCHKMIKGGKPGLKNHKDNVHNKSDYECNICHKKFENISLSRFRYHLRWHDSSKLFSCKSCEKSFVTRYHLEEHERTHTDEKSFLCNICGLGLRCKQNLIWHMKTHTGERTYQCNQCNKAFPTPTALACHIKTHSNEKKHECEICNKLFKTKGSLKTHIGNVHKVDFNDGTPNSSPRYCCQLCPRNFIFERDLIKHLKTHEHRRHVCEVCGLSYLQSSHLKKHMDTVHLNIKPHVCAICGHAFPFEFNLKQHELTHKEKGFKCTVCDKAFTLHPSLVSHQRTHTGEKPYQCHICEKAFTNRGNLKSHVEKHLIEQKQNQTFTQIVLPVIPASADVPQPSELNIFDINSSCDQTEQQDFSNQLINQCELETLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00894292;
90% Identity: iTF_00665089; iTF_00694899;
80% Identity: -