Basic Information

Insect: Epirrita christyi
Gene Symbol: lrrfip2
Assembly: GCA_951392215.1
Location: OX595836.1:1932052-1946744[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.23 3.6e+03 -2.3 0.4 44 72 74 106 52 113 0.46

2 3 3.3e-69 5e-65 220.5 17.1 1 269 125 383 125 405 0.87

3 3 0.37 5.7e+03 -3.0 9.4 128 170 429 468 412 480 0.48

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.23	3.6e+03	-2.3	0.4	44	72	74	106	52	113	0.46
2	3	3.3e-69	5e-65	220.5	17.1	1	269	125	383	125	405	0.87
3	3	0.37	5.7e+03	-3.0	9.4	128	170	429	468	412	480	0.48

Sequence Information

Coding Sequence: ATGGGGCATCGTTCAGAAATGGCTACGCCTGATAACAGCGATGAAGAGAGCGGGGATGCCTTCACGGACGGTGATTTTGGAgcatctgatgatgaaatcttcCTGGAACGCGATGATAACAAACCACTTAGCATTCCCATCAACGAAACAGTCAATCAAGAAGTTCAGCAAAAGCTGACCAATGGCAATTCTGATAGTAATGGCTTTATGGAGCCTGCCGATGAACCGAAAGTTAACGCACGAAGAAACAGTGAGCATGAACACCAATCAAGTGATGTGGAAAATTGTAGTGGCATAGCAGATGTGAGACGGGATTCACACGGTGATCAAAACCCTTCGATTGTTGGAATTCTCGGGGACCAGCACAGTCATGCGGAACAGCGTTTGGCTGCGCGGCGGGCGGCGCGGGCTGAGGCGCGGGAGATCCGCATGCGCGAGTTGGAGAGACAGCAGAGGGAACAAGAGGACCATGCCGATAAGGCGTATGATATGTACGCAGAGACAGTTGGGAGACGAGGTCCTCGCCTGGCGACCCTCAGTCCGGCCGCGGTACTCTCACCGAGGCGGTGTTCAGAAGATTCTGCGGATGACACGTTTAACATCAAAGACTTGAGGCATGATTTGAAAGAGGTAGAAGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGCTGGACAATGAGAAGGCTTCGCTCGGGTACCAGCTAGAACTACTCAAGGATAGGATCGACGAGCTGCAGGAGGAGTACGCACAGTTACAGCGAGAACACCGAGAGAAGTGTTCAGTGCACGAGCGGCTAAAGCGAGATCACGTGAGCGTGTCGCGCGAGTTGGTGGCGGCGCGCGACGCGGTGCGGGCGCGCGACGCCGCCGCGGTCGCCGCCGGTTTTGTGTTCGCGGAGGCGCCGCCCGGAGCGCACGCCACCGGCTTCGGCGACGTACCGCCACTGGCGCTGCTCTCCGAACAGGCGGACCAGATGCTTGGAGATGGAGATGCCACGCTAGACGTGCGGTTGCAAAATATAGTGAGCGCGAAGCTGGCTCTCGAGTCCGAGGTGCGTAAACTGAAGCTCACGCTCAACGAGGAGCGAGCCGCGCGGCAAAACGGCGTCGCGAACCACCACGACGACCAGTACGAGACCGAACTTGAAATGCTTCGCAAAGTGGCGATGGAGGCGAAGGCCCGCGCGGCCCGGGCGGAGGCGGAGGCGGCGCTGCAGGGCGCAGGCTGTGCGCGGCTCGAGGCGCAGCTGCAGCGTCTCCGGTCCCGCCAGGAGGCGCACGACGAGCTCGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGAGAGAGGCGCGAGAGGCACTCAACCGCGTCGAAGAGCTGGAAACTGAAAACAGCCACCTCACCAAGAGACTTGACAAACTGAAGAACGCAAAGTCCGCGCTGCTCAAGGATCTGTGA
Protein Sequence: MGHRSEMATPDNSDEESGDAFTDGDFGASDDEIFLERDDNKPLSIPINETVNQEVQQKLTNGNSDSNGFMEPADEPKVNARRNSEHEHQSSDVENCSGIADVRRDSHGDQNPSIVGILGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLATLSPAAVLSPRRCSEDSADDTFNIKDLRHDLKEVEEKFRKAMILNAQLDNEKASLGYQLELLKDRIDELQEEYAQLQREHREKCSVHERLKRDHVSVSRELVAARDAVRARDAAAVAAGFVFAEAPPGAHATGFGDVPPLALLSEQADQMLGDGDATLDVRLQNIVSAKLALESEVRKLKLTLNEERAARQNGVANHHDDQYETELEMLRKVAMEAKARAARAEAEAALQGAGCARLEAQLQRLRSRQEAHDELEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00909728;
90% Identity: -
80% Identity: -