Basic Information

Gene Symbol
pita
Assembly
GCA_951394285.1
Location
OX596136.1:3553698-3565734[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.00022 0.24 12.0 1.7 4 45 295 352 294 353 0.80
2 3 0.0019 2 9.0 1.2 3 44 433 490 431 492 0.90
3 3 0.00077 0.84 10.3 2.6 3 44 573 630 572 632 0.89

Sequence Information

Coding Sequence
atgGAAAAAAGACGAAGTCGTCCGCCTGATACAGAGGCGAAAGTAAACTTTGATACATCTAAAAGAATCTGTAGATGTTGTCTTACAACAGAGAAACTTCTAAAAAACGCTCTCGAAGTGCAAGAATATTTTATGGAACTAGCTGGAATAAACGTGTCTGTCAATGATGGTATGCCACCTTGGGTTTGTGTCGAGTGCAGTGCACTCATGAAGAAAGGAATCAGctttaaatacaaaatgttaCGAGTACAGAGTGTGCTGTACGATTACCTTATGAAATGTGCTCCGGGTAAGTTTGATGTCAACGACCCTGAGCTGACGAGATACCGAGCACCGAACCTCAGTACCACACGCACACTGGCGTTTGACAGCACCAGGGAACTATATGGATTCCATGATATTCTACAGCAAGAGAAGCAGCTATCAAAGACAGACCTGTACGACGTGCCCCTACTGCCGATGTTTGAGAACCCGTGCAGCGCGCTCGAAAGCGTCGAGGCTGCCTTCTCCGATACTGAAGATGATCCCTTGGAAAGACTACAaacTGAGAAAAAAGAAGAGCCGGTTGAAGTTAACAATGACAATGACAATGACGATAATGATAATGACAAAGAcattgataatgataatgatgatatcGACGAGGACGATTTGATTGACGATGAAGATGAAGACGATGATGACATAGAAGATCTGGAAGACGAAGAAGAGATGGAGTTAGAGCCTAATAGCACAGACACTGAGGACGAAGATAGCGAAAGCGAGCCCgaagttaagaaaaaaagagggaagaaaaagaaaaatattaagttgGAGAAAATAAGAGAACAAGAATTAAGTTTCAACCCCGAAGATGAATTACTGCAGCCGCCAGAAATAACATGGACGAGTGAAAACGATGAAATACTGATTGAGTTTGTGAAGAAGAATGAAGCGCTTTATAACCCGAAAAGCAAAACTTATAAGATTGGCGTGTTGAAAAAGAAATTGTGGATTGATATTGGAGTGATACTTAACAAATCAGATGTAGAATGCTGTAAGCGTTGGAACTACGTACGGGACTACTACATTCGGCGCCGTGGGAAACGTGCCTCAGGAGGCGAAGCGGCACGTCGGCGAGCTGCCTTGCTGGCCTTCCTAGACGACGTGCCGTCCACCGCCCGAGCGGGCTGGGTGCCGCGCGAGCCGCCCGAGCCGAGCCAACCGGAACCGGTCAAGGAAGAGAGCACTACCAACTTTGAACATCTTTGGGAGCAAATCCGAATCGGCGACCAATTCTCCAAAATGTCCGGAGTAGCGTGGACGAGCGCTAAGGAAGAACTACTGATAGACTTCGTGAGACGTCACGAGGCGTTATACAACCCGCGCAGTAAGGACTTTAGGAAGCCGCAGGTTAAGCAGAAGCTTTGGTGTGATATCGGCACGATGCTTAATAAatcagACACAGACTGCTCCAAGCGTTGGTGCTACGTTCGCGATTACTACACGCGTCGCAAGTCTAACCCGGGCGCGTTATCTACTGGGAAAGCGGCCAAACGTCGCGCGGAACTGTTGGCCTTCTTAGACTATGTACCGCCGCCAGGCAGGGCGCCACTGTCGCCACTGCCGCCTCAAGACAGTCTCATGAAAGCTGAGATGGAGTCAACGCGGTTCGACAACTCGGCCCACTCCAGCGATTATCGCGGCACAACGTACAGTAAGATGTCATCTAACGCGAGCTGGTCTAGCGAGCACGACGAGCGACTGATCGCGTTCGTGCGACGACACGAGTCGCTGTTCAACGCTAAAAGCAAGGACTTCAGGAAAGCGAGGATGAAGCAGCGACTTTGGAGGGAAATCGGAGCTATATTACACAAATcagATTCTGACTGCTACAAGCGTTGGTGCTACGTGCGTGATTACTACATCCGACGTCGAGGCAAGCCCGGAGTGCTATCCACTGGTAAAGCGGCCCGAAGACGCGCTGAGTTACTGGCCTTCTTGGACGACGTGCCGGCCGCTGCTAAAACAGCCCGGGAGGCGATGAAAGCGGAGCGCCGCGAATCTGAAACGCTAGAGGGCGCCATCTCCGATTTATTCCAGTAA
Protein Sequence
MEKRRSRPPDTEAKVNFDTSKRICRCCLTTEKLLKNALEVQEYFMELAGINVSVNDGMPPWVCVECSALMKKGISFKYKMLRVQSVLYDYLMKCAPGKFDVNDPELTRYRAPNLSTTRTLAFDSTRELYGFHDILQQEKQLSKTDLYDVPLLPMFENPCSALESVEAAFSDTEDDPLERLQTEKKEEPVEVNNDNDNDDNDNDKDIDNDNDDIDEDDLIDDEDEDDDDIEDLEDEEEMELEPNSTDTEDEDSESEPEVKKKRGKKKKNIKLEKIREQELSFNPEDELLQPPEITWTSENDEILIEFVKKNEALYNPKSKTYKIGVLKKKLWIDIGVILNKSDVECCKRWNYVRDYYIRRRGKRASGGEAARRRAALLAFLDDVPSTARAGWVPREPPEPSQPEPVKEESTTNFEHLWEQIRIGDQFSKMSGVAWTSAKEELLIDFVRRHEALYNPRSKDFRKPQVKQKLWCDIGTMLNKSDTDCSKRWCYVRDYYTRRKSNPGALSTGKAAKRRAELLAFLDYVPPPGRAPLSPLPPQDSLMKAEMESTRFDNSAHSSDYRGTTYSKMSSNASWSSEHDERLIAFVRRHESLFNAKSKDFRKARMKQRLWREIGAILHKSDSDCYKRWCYVRDYYIRRRGKPGVLSTGKAARRRAELLAFLDDVPAAAKTAREAMKAERRESETLEGAISDLFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00661239; iTF_00267140;
90% Identity
iTF_00661239;
80% Identity
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