Basic Information

Gene Symbol
pita_1
Assembly
GCA_963565295.1
Location
OY751403.1:635201-659974[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00061 0.72 10.6 1.3 4 45 291 348 290 349 0.80
2 4 0.0022 2.6 8.8 1.2 3 44 429 486 427 488 0.90
3 4 0.00041 0.48 11.2 2.6 3 44 569 626 568 628 0.90
4 4 4e-07 0.00047 20.8 2.1 3 44 702 756 700 758 0.84

Sequence Information

Coding Sequence
ATGGAAAAGAGACGAAGTCGTCCGCCCGATACAGAGGCGAAAGTAAACTTAGATACATCTAAAAGAATCTGTAGATGTTGTCTTACAACAgagaaacttttaaaaaacgCACTTGAAGTGCAAGAATATTTTATGGAGCTAGCTGGAATAAACGTGTCGGTCAACGATGGTATGCCACCGTGGGTTTGTGTGGAGTGCAGTGCGCTTATGAAGAAAGGGATCAGCTTTAAATACAAGATGTTACGAGTACAGAGTGTGCTGTACGATTACCTTATGAAATGTGCTCCGgGCCAGTTTGATGTGAACGACCCTGAGCTGACGAGATACCGGGCTCCGAACCTCAGTACCACGCGCACACTAGCGTTCGACAGCACCATGGAACTATATGGTTACCATGACATTCTACAGCAAGAAAAGCAGCTATCGCAAACAGACCTCTACGATGTGCCGCTACTGCCAATGTTTGAGAACCCTTGCAGCGCGCTCGAGAGCGTCGAGGCTGCCTTCTCCGATACTGAGGATGATCCCTTGGAGAGACTCCAAATCGAGAAAAAAGAAGAGACAGTTGAAGATAACAATGATAATGACAATGACAATGACGATAATGATAATGACAAAGACATTGACAATGATAACGATGATATCGACGATGACgatctgattgacgatgaagaTGAAGACGAAGACATGGAAGATTTGGAAGACGAAGAAGAGATGGACTTGGAGCCTAATAGCACTGACACAGAGGACGAAGAAAGTGAGAGCGAACCAGAGGTGAAGAGAAAGAGAGGGAAGAAAAAGAAGAGTATTAAATTGGAGAAAATAAGTTTCAACCCTGAAGAAGAATTACTACAGCCACCAGAGATAACATGGACGAGTGAAAATGATGAAATTCTGATTGAGTTTGTGAAGAGGAATGAAGCACTTTACAACCCGAAGAGCAAAACTTATAAGATTGGCGTGCTCAAGAAGAAACTGTGGATTGATATTGGTGTTATACTTAACAAATCAGATGTAGAATGCTGTAAACGTTGGAACTACGTACGTGACTACTACATCCGGCGCCGCGGGAAACGCGCCTCCGGGGGCGAGGCGgcgcggcgccgcgcggcgCTCCTCGCCTTCCTGGACCACGTGCCGTCCACCGCCCGCGCGGGCTGGGCGCCGCGGGACACGCCCGAGCCGACCCAACCCGAGCCCGTCAAGGAGGAGAGCACCACCAACTTTGAACATCTCTGGGAGCAGATCCGTATTGGCGACCAGTTCTCCAAGATGTCGGGAGTGGCGTGGACGAGTGCTAAGGAGGAGCTCCTGATAGACTTTGTGAGACGTCACGAAGCGTTGTATAACCCTCGCAGTAAGGACTTCAGGAAGCCGCAGGTTAAGCAGAAGCTGTGGTGTGATATCGGCACTATGCTCAACAAATCAGACACAGACTGCTCCAAGCGTTGGTGCTACGTCCGCGACTACTACACGCGCCGCAAGTCCAACCCGGGCGCGCTCTCCACCGGCAAGGCGGCCAAGCGCCGCGCGGAGCTGTTGGCCTTCCTCGACTACGTGCCTCCGCCGGGCAGGGCGCCGCTCTCGCCCCTGCCGCCTCCAGACAGTCTCATGAAAGCAGAGATGGAGTCAACGCGGTTTGATAACTCCGCTCAGTCCAGCGATTATCGCGGCACTACCTACAGTAAGATGTCATCTAACGCGAGTTGGACGAGCGAACACGACGAGAGGCTCATAGCCTTCGTGAGGCGACACGAGTCTCTGTTCAACGCCAAAAGCAAGGACTTCAGGAAAGCTAGGATGAAGCAACGACTTTGGAGGGAAATTGGAGCTATATTACACAAATCAGACTCGGACTGCTACAAACGCTGGTGCTACGTCCGCGACTACTACATCCGCCGGCGCGGCAAGCCGGGCGTGCTGGCCAcggggcgcgcggcgcggcggcgggcaGACCTGCTGGCCTTCCTGGACGACGTGCCGGCCGCCGCTAAAGCAGCCAGGCAGGAGGCGATGAAGGCAGAACGTCGCGAATCTGAAACACTAGAGGGCGCCATCTCCGATTTATTCCATGAACAGTACAGCAAGATGACATCGAACGTGACTTGGACGTGGGAGAACGACGAGAAGTTAATAAAGTTTGTGAGACGCAACGAACCGCTCTACAACCCCAAGTCCAGGAACACGCAGCTTAAACAGAAACTGTGGAATGAGATCGCTTCCCAACTTAATAAGACAGATGCGGACTGCTGCAAGCGGTGGTGCTACGTGCGAGATTACTACAGACGTCGCAGCCGGCACGCGCCCTGCGGGGAGTCCGCGCGCCGCAGGGCTTCGCTACTGGCCTTCCTGGACCGCGTGCCCAGCGTGCCCAGGGCATCGGGGCACGACAGCTAG
Protein Sequence
MEKRRSRPPDTEAKVNLDTSKRICRCCLTTEKLLKNALEVQEYFMELAGINVSVNDGMPPWVCVECSALMKKGISFKYKMLRVQSVLYDYLMKCAPGQFDVNDPELTRYRAPNLSTTRTLAFDSTMELYGYHDILQQEKQLSQTDLYDVPLLPMFENPCSALESVEAAFSDTEDDPLERLQIEKKEETVEDNNDNDNDNDDNDNDKDIDNDNDDIDDDDLIDDEDEDEDMEDLEDEEEMDLEPNSTDTEDEESESEPEVKRKRGKKKKSIKLEKISFNPEEELLQPPEITWTSENDEILIEFVKRNEALYNPKSKTYKIGVLKKKLWIDIGVILNKSDVECCKRWNYVRDYYIRRRGKRASGGEAARRRAALLAFLDHVPSTARAGWAPRDTPEPTQPEPVKEESTTNFEHLWEQIRIGDQFSKMSGVAWTSAKEELLIDFVRRHEALYNPRSKDFRKPQVKQKLWCDIGTMLNKSDTDCSKRWCYVRDYYTRRKSNPGALSTGKAAKRRAELLAFLDYVPPPGRAPLSPLPPPDSLMKAEMESTRFDNSAQSSDYRGTTYSKMSSNASWTSEHDERLIAFVRRHESLFNAKSKDFRKARMKQRLWREIGAILHKSDSDCYKRWCYVRDYYIRRRGKPGVLATGRAARRRADLLAFLDDVPAAAKAARQEAMKAERRESETLEGAISDLFHEQYSKMTSNVTWTWENDEKLIKFVRRNEPLYNPKSRNTQLKQKLWNEIASQLNKTDADCCKRWCYVRDYYRRRSRHAPCGESARRRASLLAFLDRVPSVPRASGHDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00662188;
90% Identity
iTF_00662188;
80% Identity
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